Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:82213139-82353150

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7412 15 82211415 to 82213450 2035 CpG island CpG island 7412
Cpgi7413 15 82218774 to 82218955 181 CpG island CpG island 7413
Tnfrsf13c 15 82221743 to 82224369 2626 - protein coding gene tumor necrosis factor receptor superfamily, member 13c
Tssr135535 15 82222988 to 82222992 4 - TSS region transcription start site region 135535
Cpgi7414 15 82223737 to 82224529 792 CpG island CpG island 7414
Tssr135536 15 82224330 to 82224361 31 - TSS region transcription start site region 135536
Tssr135537 15 82224364 to 82224379 15 - TSS region transcription start site region 135537
Gm49503 15 82229333 to 82233531 4198 - lincRNA gene predicted gene, 49503
Cenpm 15 82233779 to 82244748 10969 - protein coding gene centromere protein M
Cpgi7415 15 82243929 to 82244905 976 CpG island CpG island 7415
Tssr135538 15 82244374 to 82244426 52 - TSS region transcription start site region 135538
Tssr135539 15 82244688 to 82244715 27 - TSS region transcription start site region 135539
Tssr135540 15 82244716 to 82244755 39 - TSS region transcription start site region 135540
Tssr132362 15 82244776 to 82244791 15 + TSS region transcription start site region 132362
Tssr132363 15 82244822 to 82244843 21 + TSS region transcription start site region 132363
1500009C09Rik 15 82252397 to 82260753 8356 + protein coding gene RIKEN cDNA 1500009C09 gene
Tssr132364 15 82252469 to 82252475 6 + TSS region transcription start site region 132364
Tssr132365 15 82256098 to 82256130 32 + TSS region transcription start site region 132365
Tssr132366 15 82256152 to 82256155 3 + TSS region transcription start site region 132366
Tssr132367 15 82256191 to 82256204 13 + TSS region transcription start site region 132367
Tssr132368 15 82256296 to 82256313 17 + TSS region transcription start site region 132368
Tssr132369 15 82256326 to 82256333 7 + TSS region transcription start site region 132369
Cpgi7416 15 82259488 to 82259869 381 CpG island CpG island 7416
Tssr132370 15 82268793 to 82268820 27 + TSS region transcription start site region 132370
Cpgi7417 15 82274346 to 82275867 1521 CpG island CpG island 7417
Sept3 15 82274893 to 82294574 19681 + protein coding gene septin 3
Tssr132371 15 82274979 to 82275034 55 + TSS region transcription start site region 132371
Tssr132372 15 82275050 to 82275069 19 + TSS region transcription start site region 132372
Tssr132373 15 82275197 to 82275281 84 + TSS region transcription start site region 132373
Tssr4667 15 82283139 to 82283150 11 + TSS region transcription start site region 4667
Tssr132374 15 82292673 to 82292676 3 + TSS region transcription start site region 132374
Tssr132375 15 82292786 to 82292812 26 + TSS region transcription start site region 132375
Tssr132376 15 82292814 to 82292829 15 + TSS region transcription start site region 132376
Tssr132377 15 82293936 to 82293975 39 + TSS region transcription start site region 132377
Tssr132378 15 82294090 to 82294107 17 + TSS region transcription start site region 132378
Cpgi7418 15 82298866 to 82299359 493 CpG island CpG island 7418
Tssr4668 15 82298935 to 82298938 3 + TSS region transcription start site region 4668
Tssr132379 15 82298943 to 82298963 20 + TSS region transcription start site region 132379
Wbp2nl 15 82298954 to 82314623 15669 + protein coding gene WBP2 N-terminal like
Tssr132380 15 82298986 to 82298987 1 + TSS region transcription start site region 132380
Naga 15 82329532 to 82338852 9320 - protein coding gene N-acetyl galactosaminidase, alpha
Tssr135541 15 82332447 to 82332472 25 - TSS region transcription start site region 135541
Tssr135542 15 82337009 to 82337020 11 - TSS region transcription start site region 135542
Cpgi7419 15 82338651 to 82339331 680 CpG island CpG island 7419
Tssr135543 15 82338770 to 82338791 21 - TSS region transcription start site region 135543
Tssr135544 15 82338801 to 82338854 53 - TSS region transcription start site region 135544
Tssr135545 15 82338857 to 82338864 7 - TSS region transcription start site region 135545
Tssr4669 15 82338864 to 82338875 11 - TSS region transcription start site region 4669
Pheta2 15 82338947 to 82345710 6763 + protein coding gene PH domain containing endocytic trafficking adaptor 2
Cpgi7420 15 82340741 to 82341502 761 CpG island CpG island 7420
Tssr132381 15 82341199 to 82341213 14 + TSS region transcription start site region 132381
n-R5s41 15 82342653 to 82342771 118 + rRNA gene nuclear encoded rRNA 5S 41
Tssr132382 15 82343103 to 82343106 3 + TSS region transcription start site region 132382
Cpgi7421 15 82345784 to 82346543 759 CpG island CpG island 7421
Tssr132383 15 82346008 to 82346035 27 + TSS region transcription start site region 132383
Tssr132384 15 82346042 to 82346088 46 + TSS region transcription start site region 132384
Smdt1 15 82346046 to 82349062 3016 + protein coding gene single-pass membrane protein with aspartate rich tail 1
Tssr132385 15 82346117 to 82346122 5 + TSS region transcription start site region 132385
Ndufa6 15 82350139 to 82354291 4152 - protein coding gene NADH:ubiquinone oxidoreductase subunit A6
Tssr132386 15 82351770 to 82351774 4 + TSS region transcription start site region 132386