Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:82147600-82247611

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7409 15 82146585 to 82148248 1663 CpG island CpG island 7409
Srebf2 15 82147269 to 82205379 58110 + protein coding gene sterol regulatory element binding factor 2
Tssr132351 15 82147565 to 82147615 50 + TSS region transcription start site region 132351
Tssr132352 15 82147628 to 82147660 32 + TSS region transcription start site region 132352
Tssr132353 15 82149124 to 82149129 5 + TSS region transcription start site region 132353
Tssr135531 15 82166924 to 82166933 9 - TSS region transcription start site region 135531
Tssr132354 15 82167019 to 82167054 35 + TSS region transcription start site region 132354
Tssr132355 15 82169904 to 82169935 31 + TSS region transcription start site region 132355
Tssr132356 15 82169963 to 82169976 13 + TSS region transcription start site region 132356
Tssr132357 15 82169990 to 82170001 11 + TSS region transcription start site region 132357
Tssr132358 15 82170009 to 82170035 26 + TSS region transcription start site region 132358
Cpgi7410 15 82171097 to 82171344 247 CpG island CpG island 7410
Tssr132359 15 82171188 to 82171204 16 + TSS region transcription start site region 132359
Tssr132360 15 82171206 to 82171245 39 + TSS region transcription start site region 132360
Tssr4664 15 82181153 to 82181156 3 + TSS region transcription start site region 4664
Gm49502 15 82185516 to 82187625 2109 + unclassified gene predicted gene, 49502
Tssr4665 15 82197414 to 82197417 3 + TSS region transcription start site region 4665
Tssr132361 15 82197519 to 82197530 11 + TSS region transcription start site region 132361
Tssr4666 15 82197600 to 82197611 11 + TSS region transcription start site region 4666
Mir33 15 82198122 to 82198190 68 + miRNA gene microRNA 33
Shisa8 15 82206952 to 82212815 5863 - protein coding gene shisa family member 8
Cpgi7411 15 82207022 to 82208000 978 CpG island CpG island 7411
Cpgi7412 15 82211415 to 82213450 2035 CpG island CpG island 7412
Tssr135532 15 82212693 to 82212706 13 - TSS region transcription start site region 135532
Tssr135533 15 82212796 to 82212812 16 - TSS region transcription start site region 135533
Tssr135534 15 82212828 to 82212848 20 - TSS region transcription start site region 135534
Cpgi7413 15 82218774 to 82218955 181 CpG island CpG island 7413
Tnfrsf13c 15 82221743 to 82224369 2626 - protein coding gene tumor necrosis factor receptor superfamily, member 13c
Tssr135535 15 82222988 to 82222992 4 - TSS region transcription start site region 135535
Cpgi7414 15 82223737 to 82224529 792 CpG island CpG island 7414
Tssr135536 15 82224330 to 82224361 31 - TSS region transcription start site region 135536
Tssr135537 15 82224364 to 82224379 15 - TSS region transcription start site region 135537
Gm49503 15 82229333 to 82233531 4198 - lincRNA gene predicted gene, 49503
Cenpm 15 82233779 to 82244748 10969 - protein coding gene centromere protein M
Cpgi7415 15 82243929 to 82244905 976 CpG island CpG island 7415
Tssr135538 15 82244374 to 82244426 52 - TSS region transcription start site region 135538
Tssr135539 15 82244688 to 82244715 27 - TSS region transcription start site region 135539
Tssr135540 15 82244716 to 82244755 39 - TSS region transcription start site region 135540
Tssr132362 15 82244776 to 82244791 15 + TSS region transcription start site region 132362
Tssr132363 15 82244822 to 82244843 21 + TSS region transcription start site region 132363