Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:82037238-82257275

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xrcc6 15 81987835 to 82040085 52250 + protein coding gene X-ray repair complementing defective repair in Chinese hamster cells 6
Snu13 15 82041345 to 82047598 6253 - protein coding gene SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)
Cpgi7406 15 82046573 to 82047795 1222 CpG island CpG island 7406
Tssr135525 15 82047545 to 82047563 18 - TSS region transcription start site region 135525
Tssr135526 15 82047582 to 82047610 28 - TSS region transcription start site region 135526
Gm49487 15 82053652 to 82054012 360 - pseudogene predicted gene, 49487
Gm49488 15 82055635 to 82055830 195 - pseudogene predicted gene, 49488
Gm49489 15 82056638 to 82056989 351 - pseudogene predicted gene, 49489
Tssr132343 15 82059137 to 82059140 3 + TSS region transcription start site region 132343
Tssr132344 15 82059144 to 82059158 14 + TSS region transcription start site region 132344
4930407I10Rik 15 82059151 to 82066538 7387 + protein coding gene RIKEN cDNA 4930407I10 gene
Tssr132345 15 82063903 to 82063908 5 + TSS region transcription start site region 132345
Cpgi7407 15 82069894 to 82070705 811 CpG island CpG island 7407
Mei1 15 82070057 to 82126817 56760 + protein coding gene meiotic double-stranded break formation protein 1
Cpgi7408 15 82127390 to 82128467 1077 CpG island CpG island 7408
Tssr132346 15 82127916 to 82128001 85 + TSS region transcription start site region 132346
Ccdc134 15 82127922 to 82142203 14281 + protein coding gene coiled-coil domain containing 134
Tssr132347 15 82146276 to 82146282 6 + TSS region transcription start site region 132347
Cpgi7409 15 82146585 to 82148248 1663 CpG island CpG island 7409
Tssr135527 15 82146789 to 82146819 30 - TSS region transcription start site region 135527
Tssr135528 15 82147042 to 82147059 17 - TSS region transcription start site region 135528
Tssr132348 15 82147238 to 82147275 37 + TSS region transcription start site region 132348
Srebf2 15 82147269 to 82205379 58110 + protein coding gene sterol regulatory element binding factor 2
Tssr132349 15 82147336 to 82147359 23 + TSS region transcription start site region 132349
Tssr132350 15 82147372 to 82147398 26 + TSS region transcription start site region 132350
Tssr135529 15 82147491 to 82147500 9 - TSS region transcription start site region 135529
Tssr135530 15 82147511 to 82147523 12 - TSS region transcription start site region 135530
Tssr132351 15 82147565 to 82147615 50 + TSS region transcription start site region 132351
Tssr132352 15 82147628 to 82147660 32 + TSS region transcription start site region 132352
Tssr132353 15 82149124 to 82149129 5 + TSS region transcription start site region 132353
Tssr135531 15 82166924 to 82166933 9 - TSS region transcription start site region 135531
Tssr132354 15 82167019 to 82167054 35 + TSS region transcription start site region 132354
Tssr132355 15 82169904 to 82169935 31 + TSS region transcription start site region 132355
Tssr132356 15 82169963 to 82169976 13 + TSS region transcription start site region 132356
Tssr132357 15 82169990 to 82170001 11 + TSS region transcription start site region 132357
Tssr132358 15 82170009 to 82170035 26 + TSS region transcription start site region 132358
Cpgi7410 15 82171097 to 82171344 247 CpG island CpG island 7410
Tssr132359 15 82171188 to 82171204 16 + TSS region transcription start site region 132359
Tssr132360 15 82171206 to 82171245 39 + TSS region transcription start site region 132360
Tssr4664 15 82181153 to 82181156 3 + TSS region transcription start site region 4664
Gm49502 15 82185516 to 82187625 2109 + unclassified gene predicted gene, 49502
Tssr4665 15 82197414 to 82197417 3 + TSS region transcription start site region 4665
Tssr132361 15 82197519 to 82197530 11 + TSS region transcription start site region 132361
Tssr4666 15 82197600 to 82197611 11 + TSS region transcription start site region 4666
Mir33 15 82198122 to 82198190 68 + miRNA gene microRNA 33
Shisa8 15 82206952 to 82212815 5863 - protein coding gene shisa family member 8
Cpgi7411 15 82207022 to 82208000 978 CpG island CpG island 7411
Cpgi7412 15 82211415 to 82213450 2035 CpG island CpG island 7412
Tssr135532 15 82212693 to 82212706 13 - TSS region transcription start site region 135532
Tssr135533 15 82212796 to 82212812 16 - TSS region transcription start site region 135533
Tssr135534 15 82212828 to 82212848 20 - TSS region transcription start site region 135534
Cpgi7413 15 82218774 to 82218955 181 CpG island CpG island 7413
Tnfrsf13c 15 82221743 to 82224369 2626 - protein coding gene tumor necrosis factor receptor superfamily, member 13c
Tssr135535 15 82222988 to 82222992 4 - TSS region transcription start site region 135535
Cpgi7414 15 82223737 to 82224529 792 CpG island CpG island 7414
Tssr135536 15 82224330 to 82224361 31 - TSS region transcription start site region 135536
Tssr135537 15 82224364 to 82224379 15 - TSS region transcription start site region 135537
Gm49503 15 82229333 to 82233531 4198 - lincRNA gene predicted gene, 49503
Cenpm 15 82233779 to 82244748 10969 - protein coding gene centromere protein M
Cpgi7415 15 82243929 to 82244905 976 CpG island CpG island 7415
Tssr135538 15 82244374 to 82244426 52 - TSS region transcription start site region 135538
Tssr135539 15 82244688 to 82244715 27 - TSS region transcription start site region 135539
Tssr135540 15 82244716 to 82244755 39 - TSS region transcription start site region 135540
Tssr132362 15 82244776 to 82244791 15 + TSS region transcription start site region 132362
Tssr132363 15 82244822 to 82244843 21 + TSS region transcription start site region 132363
1500009C09Rik 15 82252397 to 82260753 8356 + protein coding gene RIKEN cDNA 1500009C09 gene
Tssr132364 15 82252469 to 82252475 6 + TSS region transcription start site region 132364
Tssr132365 15 82256098 to 82256130 32 + TSS region transcription start site region 132365
Tssr132366 15 82256152 to 82256155 3 + TSS region transcription start site region 132366
Tssr132367 15 82256191 to 82256204 13 + TSS region transcription start site region 132367
Tssr132368 15 82256296 to 82256313 17 + TSS region transcription start site region 132368
Tssr132369 15 82256326 to 82256333 7 + TSS region transcription start site region 132369