Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:81811609-81932857

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tef 15 81802673 to 81826863 24190 + protein coding gene thyrotroph embryonic factor
Cpgi7395 15 81810302 to 81812032 1730 CpG island CpG island 7395
Tssr132308 15 81815103 to 81815132 29 + TSS region transcription start site region 132308
Cpgi7396 15 81831169 to 81831384 215 CpG island CpG island 7396
Tssr132309 15 81835880 to 81835906 26 + TSS region transcription start site region 132309
Cpgi7397 15 81836340 to 81836797 457 CpG island CpG island 7397
Gm8444 15 81843346 to 81843713 367 - pseudogene predicted gene 8444
Tssr135503 15 81843749 to 81843755 6 - TSS region transcription start site region 135503
Tob2 15 81848270 to 81858326 10056 - protein coding gene transducer of ERBB2, 2
Tssr132310 15 81850308 to 81850325 17 + TSS region transcription start site region 132310
Cpgi7398 15 81856051 to 81856481 430 CpG island CpG island 7398
Gm49476 15 81857741 to 81858305 564 + antisense lncRNA gene predicted gene, 49476
Cpgi7399 15 81857746 to 81859957 2211 CpG island CpG island 7399
Tssr135504 15 81858262 to 81858280 18 - TSS region transcription start site region 135504
Tssr135505 15 81858317 to 81858328 11 - TSS region transcription start site region 135505
Tssr132311 15 81858392 to 81858437 45 + TSS region transcription start site region 132311
Tssr135506 15 81858532 to 81858541 9 - TSS region transcription start site region 135506
Tssr135507 15 81858786 to 81858803 17 - TSS region transcription start site region 135507
Phf5a 15 81864516 to 81871892 7376 - protein coding gene PHD finger protein 5A
Tssr135508 15 81865621 to 81865634 13 - TSS region transcription start site region 135508
Cpgi7400 15 81871609 to 81872857 1248 CpG island CpG island 7400
Tssr135509 15 81871644 to 81871709 65 - TSS region transcription start site region 135509
Tssr135510 15 81871883 to 81871916 33 - TSS region transcription start site region 135510
Aco2 15 81872463 to 81915137 42674 + protein coding gene aconitase 2, mitochondrial
Tssr132312 15 81872470 to 81872514 44 + TSS region transcription start site region 132312
Tssr132313 15 81910430 to 81910435 5 + TSS region transcription start site region 132313
Tssr132314 15 81912259 to 81912280 21 + TSS region transcription start site region 132314
Polr3h 15 81915030 to 81926243 11213 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide H
Tssr135511 15 81920001 to 81920006 5 - TSS region transcription start site region 135511
Cpgi7401 15 81925529 to 81926401 872 CpG island CpG island 7401
Tssr135512 15 81926148 to 81926223 75 - TSS region transcription start site region 135512
D15Mit118 15 81927625 to 81927745 120 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 118
Cia35 15 81927625 to 81927745 120 QTL collagen induced arthritis QTL 35
Gm32167 15 81932063 to 81936720 4657 - lncRNA gene predicted gene, 32167