Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:81766644-81976709

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zc3h7b 15 81745057 to 81796260 51203 + protein coding gene zinc finger CCCH type containing 7B
Tssr132295 15 81772291 to 81772320 29 + TSS region transcription start site region 132295
Tssr132296 15 81772333 to 81772346 13 + TSS region transcription start site region 132296
Tssr132297 15 81776272 to 81776279 7 + TSS region transcription start site region 132297
Tssr132298 15 81776293 to 81776322 29 + TSS region transcription start site region 132298
Gm17597 15 81800791 to 81802613 1822 - antisense lncRNA gene predicted gene, 17597
Tssr132299 15 81802570 to 81802577 7 + TSS region transcription start site region 132299
Tef 15 81802673 to 81826863 24190 + protein coding gene thyrotroph embryonic factor
Tssr132300 15 81802686 to 81802695 9 + TSS region transcription start site region 132300
Tssr132301 15 81802709 to 81802722 13 + TSS region transcription start site region 132301
Tssr132302 15 81802735 to 81802758 23 + TSS region transcription start site region 132302
Tssr132303 15 81802762 to 81802770 8 + TSS region transcription start site region 132303
Tssr132304 15 81802773 to 81802785 12 + TSS region transcription start site region 132304
Tssr132305 15 81802794 to 81802805 11 + TSS region transcription start site region 132305
Cpgi7395 15 81810302 to 81812032 1730 CpG island CpG island 7395
Tssr135502 15 81810857 to 81810881 24 - TSS region transcription start site region 135502
Tssr132306 15 81811448 to 81811491 43 + TSS region transcription start site region 132306
Tssr132307 15 81811512 to 81811521 9 + TSS region transcription start site region 132307
Tssr132308 15 81815103 to 81815132 29 + TSS region transcription start site region 132308
Cpgi7396 15 81831169 to 81831384 215 CpG island CpG island 7396
Tssr132309 15 81835880 to 81835906 26 + TSS region transcription start site region 132309
Cpgi7397 15 81836340 to 81836797 457 CpG island CpG island 7397
Gm8444 15 81843346 to 81843713 367 - pseudogene predicted gene 8444
Tssr135503 15 81843749 to 81843755 6 - TSS region transcription start site region 135503
Tob2 15 81848270 to 81858326 10056 - protein coding gene transducer of ERBB2, 2
Tssr132310 15 81850308 to 81850325 17 + TSS region transcription start site region 132310
Cpgi7398 15 81856051 to 81856481 430 CpG island CpG island 7398
Gm49476 15 81857741 to 81858305 564 + antisense lncRNA gene predicted gene, 49476
Cpgi7399 15 81857746 to 81859957 2211 CpG island CpG island 7399
Tssr135504 15 81858262 to 81858280 18 - TSS region transcription start site region 135504
Tssr135505 15 81858317 to 81858328 11 - TSS region transcription start site region 135505
Tssr132311 15 81858392 to 81858437 45 + TSS region transcription start site region 132311
Tssr135506 15 81858532 to 81858541 9 - TSS region transcription start site region 135506
Tssr135507 15 81858786 to 81858803 17 - TSS region transcription start site region 135507
Phf5a 15 81864516 to 81871892 7376 - protein coding gene PHD finger protein 5A
Tssr135508 15 81865621 to 81865634 13 - TSS region transcription start site region 135508
Cpgi7400 15 81871609 to 81872857 1248 CpG island CpG island 7400
Tssr135509 15 81871644 to 81871709 65 - TSS region transcription start site region 135509
Tssr135510 15 81871883 to 81871916 33 - TSS region transcription start site region 135510
Aco2 15 81872463 to 81915137 42674 + protein coding gene aconitase 2, mitochondrial
Tssr132312 15 81872470 to 81872514 44 + TSS region transcription start site region 132312
Tssr132313 15 81910430 to 81910435 5 + TSS region transcription start site region 132313
Tssr132314 15 81912259 to 81912280 21 + TSS region transcription start site region 132314
Polr3h 15 81915030 to 81926243 11213 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide H
Tssr135511 15 81920001 to 81920006 5 - TSS region transcription start site region 135511
Cpgi7401 15 81925529 to 81926401 872 CpG island CpG island 7401
Tssr135512 15 81926148 to 81926223 75 - TSS region transcription start site region 135512
D15Mit118 15 81927625 to 81927745 120 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 118
Cia35 15 81927625 to 81927745 120 QTL collagen induced arthritis QTL 35
Gm32167 15 81932063 to 81936720 4657 - lncRNA gene predicted gene, 32167
Tssr135513 15 81936695 to 81936716 21 - TSS region transcription start site region 135513
Tssr132315 15 81936753 to 81936839 86 + TSS region transcription start site region 132315
Csdc2 15 81936759 to 81950941 14182 + protein coding gene cold shock domain containing C2, RNA binding
Tssr132316 15 81936846 to 81936874 28 + TSS region transcription start site region 132316
Cpgi7402 15 81936874 to 81937094 220 CpG island CpG island 7402
Tssr132317 15 81936880 to 81936900 20 + TSS region transcription start site region 132317
Tssr132318 15 81936911 to 81936934 23 + TSS region transcription start site region 132318
Tssr132319 15 81949213 to 81949221 8 + TSS region transcription start site region 132319
Pmm1 15 81951108 to 81960930 9822 - protein coding gene phosphomannomutase 1
Tssr135514 15 81955703 to 81955732 29 - TSS region transcription start site region 135514
Tssr135515 15 81956197 to 81956241 44 - TSS region transcription start site region 135515
Cpgi7403 15 81960150 to 81961313 1163 CpG island CpG island 7403
Tssr135516 15 81960801 to 81960812 11 - TSS region transcription start site region 135516
Tssr135517 15 81960818 to 81960846 28 - TSS region transcription start site region 135517
Tssr135518 15 81960851 to 81960872 21 - TSS region transcription start site region 135518
Cyp2d67-ps 15 81967701 to 81968549 848 + pseudogene cytochrome P450, family 2, subfamily d, polypeptide 67, pseudogene
Tssr4663 15 81969319 to 81969365 46 - TSS region transcription start site region 4663
Tssr132320 15 81972365 to 81972379 14 + TSS region transcription start site region 132320
Gm5805 15 81972390 to 81972845 455 + pseudogene predicted gene 5805