Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:81647333-81897346

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ep300 15 81586214 to 81652077 65863 + protein coding gene E1A binding protein p300
Tssr132287 15 81648796 to 81648811 15 + TSS region transcription start site region 132287
Gm49444 15 81656185 to 81656399 214 - pseudogene predicted gene, 49444
Cpgi7391 15 81663728 to 81664705 977 CpG island CpG island 7391
L3mbtl2 15 81663889 to 81688315 24426 + protein coding gene L3MBTL2 polycomb repressive complex 1 subunit
Tssr132288 15 81663914 to 81663958 44 + TSS region transcription start site region 132288
Tssr132289 15 81663974 to 81663985 11 + TSS region transcription start site region 132289
Gm18284 15 81674260 to 81674878 618 - pseudogene predicted gene, 18284
Chadl 15 81686166 to 81697376 11210 - protein coding gene chondroadherin-like
Cpgi7392 15 81693310 to 81695266 1956 CpG island CpG island 7392
Tssr135493 15 81694195 to 81694241 46 - TSS region transcription start site region 135493
Tssr135494 15 81697256 to 81697298 42 - TSS region transcription start site region 135494
Tssr135495 15 81697311 to 81697324 13 - TSS region transcription start site region 135495
Rangap1 15 81704248 to 81730798 26550 - protein coding gene RAN GTPase activating protein 1
Tssr135496 15 81712555 to 81712574 19 - TSS region transcription start site region 135496
Tssr135497 15 81726221 to 81726226 5 - TSS region transcription start site region 135497
Tssr135498 15 81726229 to 81726270 41 - TSS region transcription start site region 135498
Tssr132290 15 81726374 to 81726394 20 + TSS region transcription start site region 132290
Cpgi7393 15 81729206 to 81730277 1071 CpG island CpG island 7393
Tssr135499 15 81729833 to 81729844 11 - TSS region transcription start site region 135499
Tssr135500 15 81729851 to 81729854 3 - TSS region transcription start site region 135500
Tssr135501 15 81729864 to 81729913 49 - TSS region transcription start site region 135501
Cpgi7394 15 81744936 to 81746208 1272 CpG island CpG island 7394
Tssr132291 15 81745042 to 81745051 9 + TSS region transcription start site region 132291
Zc3h7b 15 81745057 to 81796260 51203 + protein coding gene zinc finger CCCH type containing 7B
Tssr132292 15 81745057 to 81745131 74 + TSS region transcription start site region 132292
Tssr132293 15 81745139 to 81745169 30 + TSS region transcription start site region 132293
Tssr132294 15 81745172 to 81745188 16 + TSS region transcription start site region 132294
Tssr132295 15 81772291 to 81772320 29 + TSS region transcription start site region 132295
Tssr132296 15 81772333 to 81772346 13 + TSS region transcription start site region 132296
Tssr132297 15 81776272 to 81776279 7 + TSS region transcription start site region 132297
Tssr132298 15 81776293 to 81776322 29 + TSS region transcription start site region 132298
Gm17597 15 81800791 to 81802613 1822 - antisense lncRNA gene predicted gene, 17597
Tssr132299 15 81802570 to 81802577 7 + TSS region transcription start site region 132299
Tef 15 81802673 to 81826863 24190 + protein coding gene thyrotroph embryonic factor
Tssr132300 15 81802686 to 81802695 9 + TSS region transcription start site region 132300
Tssr132301 15 81802709 to 81802722 13 + TSS region transcription start site region 132301
Tssr132302 15 81802735 to 81802758 23 + TSS region transcription start site region 132302
Tssr132303 15 81802762 to 81802770 8 + TSS region transcription start site region 132303
Tssr132304 15 81802773 to 81802785 12 + TSS region transcription start site region 132304
Tssr132305 15 81802794 to 81802805 11 + TSS region transcription start site region 132305
Cpgi7395 15 81810302 to 81812032 1730 CpG island CpG island 7395
Tssr135502 15 81810857 to 81810881 24 - TSS region transcription start site region 135502
Tssr132306 15 81811448 to 81811491 43 + TSS region transcription start site region 132306
Tssr132307 15 81811512 to 81811521 9 + TSS region transcription start site region 132307
Tssr132308 15 81815103 to 81815132 29 + TSS region transcription start site region 132308
Cpgi7396 15 81831169 to 81831384 215 CpG island CpG island 7396
Tssr132309 15 81835880 to 81835906 26 + TSS region transcription start site region 132309
Cpgi7397 15 81836340 to 81836797 457 CpG island CpG island 7397
Gm8444 15 81843346 to 81843713 367 - pseudogene predicted gene 8444
Tssr135503 15 81843749 to 81843755 6 - TSS region transcription start site region 135503
Tob2 15 81848270 to 81858326 10056 - protein coding gene transducer of ERBB2, 2
Tssr132310 15 81850308 to 81850325 17 + TSS region transcription start site region 132310
Cpgi7398 15 81856051 to 81856481 430 CpG island CpG island 7398
Gm49476 15 81857741 to 81858305 564 + antisense lncRNA gene predicted gene, 49476
Cpgi7399 15 81857746 to 81859957 2211 CpG island CpG island 7399
Tssr135504 15 81858262 to 81858280 18 - TSS region transcription start site region 135504
Tssr135505 15 81858317 to 81858328 11 - TSS region transcription start site region 135505
Tssr132311 15 81858392 to 81858437 45 + TSS region transcription start site region 132311
Tssr135506 15 81858532 to 81858541 9 - TSS region transcription start site region 135506
Tssr135507 15 81858786 to 81858803 17 - TSS region transcription start site region 135507
Phf5a 15 81864516 to 81871892 7376 - protein coding gene PHD finger protein 5A
Tssr135508 15 81865621 to 81865634 13 - TSS region transcription start site region 135508
Cpgi7400 15 81871609 to 81872857 1248 CpG island CpG island 7400
Tssr135509 15 81871644 to 81871709 65 - TSS region transcription start site region 135509
Tssr135510 15 81871883 to 81871916 33 - TSS region transcription start site region 135510
Aco2 15 81872463 to 81915137 42674 + protein coding gene aconitase 2, mitochondrial
Tssr132312 15 81872470 to 81872514 44 + TSS region transcription start site region 132312