Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:80622518-80822522

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grap2 15 80572597 to 80652854 80257 + protein coding gene GRB2-related adaptor protein 2
Tssr132230 15 80623342 to 80623354 12 + TSS region transcription start site region 132230
Tssr132231 15 80623470 to 80623491 21 + TSS region transcription start site region 132231
Tssr132232 15 80623499 to 80623549 50 + TSS region transcription start site region 132232
Gm49553 15 80640458 to 80642408 1950 + unclassified gene predicted gene, 49553
Mir6957 15 80646073 to 80646136 63 + miRNA gene microRNA 6957
Tssr135441 15 80650052 to 80650060 8 - TSS region transcription start site region 135441
Cpgi7376 15 80671304 to 80672436 1132 CpG island CpG island 7376
Tssr132233 15 80671622 to 80671633 11 + TSS region transcription start site region 132233
Tssr132234 15 80671636 to 80671646 10 + TSS region transcription start site region 132234
Tssr132235 15 80671648 to 80671677 29 + TSS region transcription start site region 132235
Tssr132236 15 80671686 to 80671696 10 + TSS region transcription start site region 132236
Tssr132237 15 80671829 to 80671861 32 + TSS region transcription start site region 132237
Fam83f 15 80671847 to 80700425 28578 + protein coding gene family with sequence similarity 83, member F
A430088P11Rik 15 80691025 to 80697610 6585 - antisense lncRNA gene RIKEN cDNA A430088P11 gene
Tssr135442 15 80697601 to 80697616 15 - TSS region transcription start site region 135442
Tssr135443 15 80701567 to 80701579 12 - TSS region transcription start site region 135443
Cpgi7377 15 80710758 to 80712366 1608 CpG island CpG island 7377
Tssr132238 15 80711241 to 80711265 24 + TSS region transcription start site region 132238
Tssr132239 15 80711292 to 80711340 48 + TSS region transcription start site region 132239
Tnrc6b 15 80711313 to 80941085 229772 + protein coding gene trinucleotide repeat containing 6b
Tssr135444 15 80711994 to 80712005 11 - TSS region transcription start site region 135444
Gm49512 15 80712271 to 80713686 1415 + sense intronic lncRNA gene predicted gene, 49512
Tssr132240 15 80722518 to 80722522 4 + TSS region transcription start site region 132240
Tssr4661 15 80743020 to 80743027 7 - TSS region transcription start site region 4661
Tssr135445 15 80743653 to 80743673 20 - TSS region transcription start site region 135445
Tssr132241 15 80743793 to 80743838 45 + TSS region transcription start site region 132241
Tssr132242 15 80762424 to 80762457 33 + TSS region transcription start site region 132242
Tssr135446 15 80798452 to 80798465 13 - TSS region transcription start site region 135446
Tssr132243 15 80798586 to 80798608 22 + TSS region transcription start site region 132243
Tssr132244 15 80798627 to 80798652 25 + TSS region transcription start site region 132244
D15Mit31 15 80814519 to 80814706 187 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 31
D15Mit32 15 80814519 to 80814647 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 32
Tssr132245 15 80820403 to 80820415 12 + TSS region transcription start site region 132245
Tssr132246 15 80820422 to 80820434 12 + TSS region transcription start site region 132246