Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:80576648-80766677

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grap2 15 80572597 to 80652854 80257 + protein coding gene GRB2-related adaptor protein 2
Tssr132226 15 80578367 to 80578391 24 + TSS region transcription start site region 132226
Tssr132227 15 80597720 to 80597765 45 + TSS region transcription start site region 132227
Tssr132228 15 80597865 to 80597875 10 + TSS region transcription start site region 132228
Tssr132229 15 80611753 to 80611767 14 + TSS region transcription start site region 132229
5830419E12Rik 15 80615947 to 80617979 2032 protein coding gene RIKEN cDNA 5830419E12 gene
Tssr132230 15 80623342 to 80623354 12 + TSS region transcription start site region 132230
Tssr132231 15 80623470 to 80623491 21 + TSS region transcription start site region 132231
Tssr132232 15 80623499 to 80623549 50 + TSS region transcription start site region 132232
Gm49553 15 80640458 to 80642408 1950 + unclassified gene predicted gene, 49553
Mir6957 15 80646073 to 80646136 63 + miRNA gene microRNA 6957
Tssr135441 15 80650052 to 80650060 8 - TSS region transcription start site region 135441
Cpgi7376 15 80671304 to 80672436 1132 CpG island CpG island 7376
Tssr132233 15 80671622 to 80671633 11 + TSS region transcription start site region 132233
Tssr132234 15 80671636 to 80671646 10 + TSS region transcription start site region 132234
Tssr132235 15 80671648 to 80671677 29 + TSS region transcription start site region 132235
Tssr132236 15 80671686 to 80671696 10 + TSS region transcription start site region 132236
Tssr132237 15 80671829 to 80671861 32 + TSS region transcription start site region 132237
Fam83f 15 80671847 to 80700425 28578 + protein coding gene family with sequence similarity 83, member F
A430088P11Rik 15 80691025 to 80697610 6585 - antisense lncRNA gene RIKEN cDNA A430088P11 gene
Tssr135442 15 80697601 to 80697616 15 - TSS region transcription start site region 135442
Tssr135443 15 80701567 to 80701579 12 - TSS region transcription start site region 135443
Cpgi7377 15 80710758 to 80712366 1608 CpG island CpG island 7377
Tssr132238 15 80711241 to 80711265 24 + TSS region transcription start site region 132238
Tssr132239 15 80711292 to 80711340 48 + TSS region transcription start site region 132239
Tnrc6b 15 80711313 to 80941085 229772 + protein coding gene trinucleotide repeat containing 6b
Tssr135444 15 80711994 to 80712005 11 - TSS region transcription start site region 135444
Gm49512 15 80712271 to 80713686 1415 + sense intronic lncRNA gene predicted gene, 49512
Tssr132240 15 80722518 to 80722522 4 + TSS region transcription start site region 132240
Tssr4661 15 80743020 to 80743027 7 - TSS region transcription start site region 4661
Tssr135445 15 80743653 to 80743673 20 - TSS region transcription start site region 135445
Tssr132241 15 80743793 to 80743838 45 + TSS region transcription start site region 132241
Tssr132242 15 80762424 to 80762457 33 + TSS region transcription start site region 132242