MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:80096553-80156559

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Syngr1	15	80091334 to 80119501	28167	+	protein coding gene	synaptogyrin 1
Cpgi7363	15	80096492 to 80096671	179		CpG island	CpG island 7363
Tssr132158	15	80097866 to 80097873	7	+	TSS region	transcription start site region 132158
Tssr132159	15	80098180 to 80098203	23	+	TSS region	transcription start site region 132159
Tssr135419	15	80098927 to 80098934	7	-	TSS region	transcription start site region 135419
Tssr132160	15	80099151 to 80099163	12	+	TSS region	transcription start site region 132160
Tssr132161	15	80110445 to 80110485	40	+	TSS region	transcription start site region 132161
Tssr132162	15	80115442 to 80115488	46	+	TSS region	transcription start site region 132162
Cpgi7364	15	80115882 to 80116118	236		CpG island	CpG island 7364
Tssr132163	15	80126553 to 80126559	6	+	TSS region	transcription start site region 132163
Gm31253	15	80129399 to 80134709	5310	-	lncRNA gene	predicted gene, 31253
Cpgi7365	15	80132993 to 80133956	963		CpG island	CpG island 7365
Tssr132164	15	80133114 to 80133155	41	+	TSS region	transcription start site region 132164
Tab1	15	80133154 to 80161707	28553	+	protein coding gene	TGF-beta activated kinase 1/MAP3K7 binding protein 1
Tssr132165	15	80133511 to 80133527	16	+	TSS region	transcription start site region 132165
Tssr135420	15	80134037 to 80134060	23	-	TSS region	transcription start site region 135420
Tssr132166	15	80135237 to 80135241	4	+	TSS region	transcription start site region 132166
Tssr132167	15	80148709 to 80148724	15	+	TSS region	transcription start site region 132167