Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:79525086-79685114

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdelr3 15 79516411 to 79527739 11328 + protein coding gene KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
Ddx17 15 79527736 to 79546741 19005 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
Tssr132100 15 79527737 to 79527745 8 + TSS region transcription start site region 132100
Tssr135351 15 79529657 to 79529661 4 - TSS region transcription start site region 135351
Tssr132101 15 79533833 to 79533848 15 + TSS region transcription start site region 132101
Tssr135352 15 79534201 to 79534209 8 - TSS region transcription start site region 135352
Tssr135353 15 79534363 to 79534382 19 - TSS region transcription start site region 135353
Tssr135354 15 79545739 to 79545743 4 - TSS region transcription start site region 135354
Cpgi7340 15 79545933 to 79547432 1499 CpG island CpG island 7340
Tssr135355 15 79546270 to 79546273 3 - TSS region transcription start site region 135355
Tssr135356 15 79546447 to 79546458 11 - TSS region transcription start site region 135356
Tssr135357 15 79546541 to 79546566 25 - TSS region transcription start site region 135357
Tssr135358 15 79546579 to 79546588 9 - TSS region transcription start site region 135358
Tssr135359 15 79546745 to 79546787 42 - TSS region transcription start site region 135359
Tssr132102 15 79546854 to 79546912 58 + TSS region transcription start site region 132102
Dmc1 15 79561497 to 79605109 43612 - protein coding gene DNA meiotic recombinase 1
D15Mit259 15 79563697 to 79563777 80 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 259
D15Mit71 15 79590436 to 79590561 125 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 71
Rapop5 15 79590561 to 9272936 -70317625 QTL radiation-induced apoptosis 5
Gm27903 15 79594668 to 79594793 125 - miRNA gene predicted gene, 27903
Cpgi7341 15 79604483 to 79605472 989 CpG island CpG island 7341
Tssr135360 15 79605086 to 79605114 28 - TSS region transcription start site region 135360
Fam227a 15 79609576 to 79658956 49380 - protein coding gene family with sequence similarity 227, member A
Tssr135361 15 79620761 to 79620780 19 - TSS region transcription start site region 135361
Cpgi7342 15 79658560 to 79659468 908 CpG island CpG island 7342
Tssr135362 15 79658789 to 79658798 9 - TSS region transcription start site region 135362
Tssr135363 15 79658854 to 79658888 34 - TSS region transcription start site region 135363
Tssr135364 15 79658889 to 79658933 44 - TSS region transcription start site region 135364
Tssr132103 15 79659188 to 79659194 6 + TSS region transcription start site region 132103
Tssr132104 15 79659196 to 79659267 71 + TSS region transcription start site region 132104
Cby1 15 79659199 to 79667660 8461 + protein coding gene chibby family member 1, beta catenin antagonist
Gm30877 15 79665768 to 79666993 1225 - lncRNA gene predicted gene, 30877
Tssr132105 15 79668541 to 79668546 5 + TSS region transcription start site region 132105
Cpgi7343 15 79670653 to 79671439 786 CpG island CpG island 7343
Tssr132106 15 79670856 to 79670888 32 + TSS region transcription start site region 132106
Tomm22 15 79670868 to 79672862 1994 + protein coding gene translocase of outer mitochondrial membrane 22
Tssr132107 15 79671073 to 79671133 60 + TSS region transcription start site region 132107
Tssr132108 15 79671136 to 79671148 12 + TSS region transcription start site region 132108
Josd1 15 79674250 to 79687872 13622 - protein coding gene Josephin domain containing 1
Gm49520 15 79681102 to 79681322 220 - pseudogene predicted gene, 49520