Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:79220420-79350435

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30527 15 79225254 to 79229022 3768 - lncRNA gene predicted gene, 30527
4930500E03Rik 15 79228202 to 79229364 1162 unclassified gene RIKEN cDNA 4930500E03 gene
Cpgi7322 15 79229083 to 79229802 719 CpG island CpG island 7322
Tssr132078 15 79229140 to 79229162 22 + TSS region transcription start site region 132078
Pick1 15 79229160 to 79249466 20306 + protein coding gene protein interacting with C kinase 1
Tssr132079 15 79229363 to 79229439 76 + TSS region transcription start site region 132079
Gm49486 15 79229391 to 79256674 27283 + protein coding gene predicted gene, 49486
Tssr132080 15 79229449 to 79229460 11 + TSS region transcription start site region 132080
Tssr132081 15 79247150 to 79247152 2 + TSS region transcription start site region 132081
Slc16a8 15 79251016 to 79254748 3732 - protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 8
Cpgi7323 15 79251486 to 79253010 1524 CpG island CpG island 7323
Cpgi7324 15 79253565 to 79253743 178 CpG island CpG island 7324
Tssr135318 15 79254737 to 79254764 27 - TSS region transcription start site region 135318
Lgals1-ps2 15 79255574 to 79256092 518 + pseudogene lectin, galactose binding, soluble 1, pseudogene 2
Baiap2l2 15 79258195 to 79285532 27337 - protein coding gene BAI1-associated protein 2-like 2
Cpgi7325 15 79258560 to 79258740 180 CpG island CpG island 7325
Tssr135319 15 79258614 to 79258647 33 - TSS region transcription start site region 135319
Cpgi7326 15 79260773 to 79262193 1420 CpG island CpG island 7326
Tssr135320 15 79261277 to 79261309 32 - TSS region transcription start site region 135320
Tssr135321 15 79265783 to 79265792 9 - TSS region transcription start site region 135321
D15Mit238 15 79269828 to 79269948 120 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 238
Cpgi7327 15 79270363 to 79270757 394 CpG island CpG island 7327
Cpgi7328 15 79271152 to 79271339 187 CpG island CpG island 7328
Tssr135322 15 79283534 to 79283582 48 - TSS region transcription start site region 135322
Tssr135323 15 79285420 to 79285435 15 - TSS region transcription start site region 135323
Tssr135324 15 79285450 to 79285465 15 - TSS region transcription start site region 135324
Tssr135325 15 79285470 to 79285498 28 - TSS region transcription start site region 135325
Tssr135326 15 79285502 to 79285516 14 - TSS region transcription start site region 135326
Pla2g6 15 79286228 to 79328390 42162 - protein coding gene phospholipase A2, group VI
Gm41358 15 79310515 to 79311388 873 + lncRNA gene predicted gene, 41358
Gm20420 15 79314196 to 79316658 2462 + antisense lncRNA gene predicted gene 20420
Tssr135327 15 79323335 to 79323349 14 - TSS region transcription start site region 135327
Tssr132082 15 79327583 to 79327594 11 + TSS region transcription start site region 132082
2310026G15Rik 15 79327626 to 79328715 1089 unclassified gene RIKEN cDNA 2310026G15 gene
Cpgi7329 15 79327799 to 79328538 739 CpG island CpG island 7329
Tssr135328 15 79328126 to 79328150 24 - TSS region transcription start site region 135328
Tssr135329 15 79328154 to 79328191 37 - TSS region transcription start site region 135329
Tssr135330 15 79328201 to 79328261 60 - TSS region transcription start site region 135330
Tssr135331 15 79334356 to 79334357 1 - TSS region transcription start site region 135331
Tssr132083 15 79346608 to 79346617 9 + TSS region transcription start site region 132083
Maff 15 79346621 to 79359076 12455 + protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
Cpgi7330 15 79346989 to 79348612 1623 CpG island CpG island 7330
Tssr132084 15 79347534 to 79347556 22 + TSS region transcription start site region 132084
Tssr132085 15 79347567 to 79347578 11 + TSS region transcription start site region 132085
Tssr132086 15 79347583 to 79347598 15 + TSS region transcription start site region 132086
Tssr132087 15 79347599 to 79347614 15 + TSS region transcription start site region 132087
Tssr132088 15 79347630 to 79347644 14 + TSS region transcription start site region 132088
Tssr132089 15 79347937 to 79348030 93 + TSS region transcription start site region 132089
Tssr132090 15 79348129 to 79348154 25 + TSS region transcription start site region 132090
Tssr135332 15 79348185 to 79348207 22 - TSS region transcription start site region 135332
Tssr132091 15 79348391 to 79348407 16 + TSS region transcription start site region 132091
Tssr132092 15 79348421 to 79348432 11 + TSS region transcription start site region 132092