Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78906725-78950465

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49510 15 78899667 to 78919032 19365 + protein coding gene predicted gene, 49510
Sh3bp1 15 78899768 to 78912051 12283 + protein coding gene SH3-domain binding protein 1
Tssr132009 15 78908425 to 78908470 45 + TSS region transcription start site region 132009
Tssr132010 15 78911488 to 78911516 28 + TSS region transcription start site region 132010
1700027A07Rik 15 78911966 to 78913660 1694 - antisense lncRNA gene RIKEN cDNA 1700027A07 gene
Cpgi7305 15 78913312 to 78914887 1575 CpG island CpG island 7305
Tssr132011 15 78913907 to 78913910 3 + TSS region transcription start site region 132011
Tssr132012 15 78913916 to 78913927 11 + TSS region transcription start site region 132012
Pdxp 15 78913919 to 78919517 5598 + protein coding gene pyridoxal (pyridoxine, vitamin B6) phosphatase
Tssr132013 15 78913931 to 78913966 35 + TSS region transcription start site region 132013
Tssr132014 15 78914370 to 78914406 36 + TSS region transcription start site region 132014
Tssr132015 15 78914408 to 78914475 67 + TSS region transcription start site region 132015
Gm30368 15 78919620 to 78928144 8524 - lncRNA gene predicted gene, 30368
Tssr135298 15 78924989 to 78924991 2 - TSS region transcription start site region 135298
Tssr132016 15 78926720 to 78926735 15 + TSS region transcription start site region 132016
Lgals1 15 78926725 to 78930465 3740 + protein coding gene lectin, galactose binding, soluble 1
Tssr135299 15 78927258 to 78927269 11 - TSS region transcription start site region 135299
Cpgi7306 15 78927941 to 78928305 364 CpG island CpG island 7306
Tssr132017 15 78928368 to 78928399 31 + TSS region transcription start site region 132017
Tssr132018 15 78929176 to 78929208 32 + TSS region transcription start site region 132018
Tssr132019 15 78929644 to 78929686 42 + TSS region transcription start site region 132019
Tssr135300 15 78929734 to 78929748 14 - TSS region transcription start site region 135300
Tssr132020 15 78930151 to 78930170 19 + TSS region transcription start site region 132020
Cpgi7307 15 78934781 to 78935518 737 CpG island CpG island 7307
Tssr132021 15 78934919 to 78934992 73 + TSS region transcription start site region 132021
Nol12 15 78934933 to 78941910 6977 + protein coding gene nucleolar protein 12
Tssr132022 15 78935177 to 78935221 44 + TSS region transcription start site region 132022
Cpgi7308 15 78947640 to 78948145 505 CpG island CpG island 7308
Triobp 15 78947724 to 79005869 58145 + protein coding gene TRIO and F-actin binding protein
Tssr132023 15 78947890 to 78947897 7 + TSS region transcription start site region 132023
Tssr132024 15 78947911 to 78947934 23 + TSS region transcription start site region 132024
Tssr132025 15 78947937 to 78947946 9 + TSS region transcription start site region 132025
Tssr132026 15 78947947 to 78947960 13 + TSS region transcription start site region 132026