Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78844408-78954422

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdc42ep1 15 78842647 to 78850902 8255 + protein coding gene CDC42 effector protein (Rho GTPase binding) 1
Tssr135290 15 78844872 to 78844874 2 - TSS region transcription start site region 135290
Lgals2 15 78850860 to 78855529 4669 - protein coding gene lectin, galactose-binding, soluble 2
Tssr131991 15 78850935 to 78850959 24 + TSS region transcription start site region 131991
Tssr131992 15 78850961 to 78850989 28 + TSS region transcription start site region 131992
Tssr135291 15 78850977 to 78850995 18 - TSS region transcription start site region 135291
Tssr135292 15 78851145 to 78851157 12 - TSS region transcription start site region 135292
Tssr135293 15 78851379 to 78851404 25 - TSS region transcription start site region 135293
Tssr135294 15 78855517 to 78855536 19 - TSS region transcription start site region 135294
Tssr135295 15 78855698 to 78855739 41 - TSS region transcription start site region 135295
Gm26634 15 78862956 to 78868533 5577 - lincRNA gene predicted gene, 26634
Cpgi7303 15 78876916 to 78878415 1499 CpG island CpG island 7303
Tssr135296 15 78877085 to 78877126 41 - TSS region transcription start site region 135296
Tssr131993 15 78877161 to 78877170 9 + TSS region transcription start site region 131993
Tssr131994 15 78877172 to 78877196 24 + TSS region transcription start site region 131994
Gga1 15 78877190 to 78894585 17395 + protein coding gene golgi associated, gamma adaptin ear containing, ARF binding protein 1
Tssr131995 15 78877249 to 78877264 15 + TSS region transcription start site region 131995
Tssr131996 15 78877297 to 78877315 18 + TSS region transcription start site region 131996
Tssr4651 15 78877455 to 78877482 27 - TSS region transcription start site region 4651
Tssr131997 15 78877541 to 78877585 44 + TSS region transcription start site region 131997
Tssr131998 15 78882125 to 78882155 30 + TSS region transcription start site region 131998
Tssr131999 15 78885283 to 78885320 37 + TSS region transcription start site region 131999
Tssr132000 15 78889741 to 78889790 49 + TSS region transcription start site region 132000
Tssr132001 15 78889801 to 78889817 16 + TSS region transcription start site region 132001
Tssr132002 15 78889820 to 78889834 14 + TSS region transcription start site region 132002
Mir6955 15 78891840 to 78891913 73 + miRNA gene microRNA 6955
Tssr132003 15 78892449 to 78892484 35 + TSS region transcription start site region 132003
Tssr132004 15 78899408 to 78899422 14 + TSS region transcription start site region 132004
Cpgi7304 15 78899419 to 78900261 842 CpG island CpG island 7304
Tssr135297 15 78899665 to 78899716 51 - TSS region transcription start site region 135297
Gm49510 15 78899667 to 78919032 19365 + protein coding gene predicted gene, 49510
Tssr132005 15 78899755 to 78899775 20 + TSS region transcription start site region 132005
Sh3bp1 15 78899768 to 78912051 12283 + protein coding gene SH3-domain binding protein 1
Tssr132006 15 78899783 to 78899815 32 + TSS region transcription start site region 132006
Tssr4652 15 78899822 to 78899827 5 + TSS region transcription start site region 4652
Tssr132007 15 78899844 to 78899853 9 + TSS region transcription start site region 132007
Tssr132008 15 78905790 to 78905801 11 + TSS region transcription start site region 132008
Tssr132009 15 78908425 to 78908470 45 + TSS region transcription start site region 132009
Tssr132010 15 78911488 to 78911516 28 + TSS region transcription start site region 132010
1700027A07Rik 15 78911966 to 78913660 1694 - antisense lncRNA gene RIKEN cDNA 1700027A07 gene
Cpgi7305 15 78913312 to 78914887 1575 CpG island CpG island 7305
Tssr132011 15 78913907 to 78913910 3 + TSS region transcription start site region 132011
Tssr132012 15 78913916 to 78913927 11 + TSS region transcription start site region 132012
Pdxp 15 78913919 to 78919517 5598 + protein coding gene pyridoxal (pyridoxine, vitamin B6) phosphatase
Tssr132013 15 78913931 to 78913966 35 + TSS region transcription start site region 132013
Tssr132014 15 78914370 to 78914406 36 + TSS region transcription start site region 132014
Tssr132015 15 78914408 to 78914475 67 + TSS region transcription start site region 132015
Gm30368 15 78919620 to 78928144 8524 - lncRNA gene predicted gene, 30368
Tssr135298 15 78924989 to 78924991 2 - TSS region transcription start site region 135298
Tssr132016 15 78926720 to 78926735 15 + TSS region transcription start site region 132016
Lgals1 15 78926725 to 78930465 3740 + protein coding gene lectin, galactose binding, soluble 1
Tssr135299 15 78927258 to 78927269 11 - TSS region transcription start site region 135299
Cpgi7306 15 78927941 to 78928305 364 CpG island CpG island 7306
Tssr132017 15 78928368 to 78928399 31 + TSS region transcription start site region 132017
Tssr132018 15 78929176 to 78929208 32 + TSS region transcription start site region 132018
Tssr132019 15 78929644 to 78929686 42 + TSS region transcription start site region 132019
Tssr135300 15 78929734 to 78929748 14 - TSS region transcription start site region 135300
Tssr132020 15 78930151 to 78930170 19 + TSS region transcription start site region 132020
Cpgi7307 15 78934781 to 78935518 737 CpG island CpG island 7307
Tssr132021 15 78934919 to 78934992 73 + TSS region transcription start site region 132021
Nol12 15 78934933 to 78941910 6977 + protein coding gene nucleolar protein 12
Tssr132022 15 78935177 to 78935221 44 + TSS region transcription start site region 132022
Cpgi7308 15 78947640 to 78948145 505 CpG island CpG island 7308
Triobp 15 78947724 to 79005869 58145 + protein coding gene TRIO and F-actin binding protein
Tssr132023 15 78947890 to 78947897 7 + TSS region transcription start site region 132023
Tssr132024 15 78947911 to 78947934 23 + TSS region transcription start site region 132024
Tssr132025 15 78947937 to 78947946 9 + TSS region transcription start site region 132025
Tssr132026 15 78947947 to 78947960 13 + TSS region transcription start site region 132026