Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78789872-78899874

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Card10 15 78775138 to 78803042 27904 - protein coding gene caspase recruitment domain family, member 10
Cpgi7299 15 78799104 to 78799377 273 CpG island CpG island 7299
Cpgi7300 15 78801927 to 78803834 1907 CpG island CpG island 7300
Tssr135285 15 78802870 to 78802884 14 - TSS region transcription start site region 135285
Tssr135286 15 78802885 to 78802920 35 - TSS region transcription start site region 135286
Tssr135287 15 78803015 to 78803050 35 - TSS region transcription start site region 135287
Tssr135288 15 78804364 to 78804378 14 - TSS region transcription start site region 135288
Cpgi7301 15 78820699 to 78820921 222 CpG island CpG island 7301
Gm7318 15 78820810 to 78821402 592 + pseudogene predicted gene 7318
Tssr135289 15 78837816 to 78837817 1 - TSS region transcription start site region 135289
Cpgi7302 15 78842099 to 78843431 1332 CpG island CpG island 7302
Tssr131990 15 78842632 to 78842652 20 + TSS region transcription start site region 131990
Cdc42ep1 15 78842647 to 78850902 8255 + protein coding gene CDC42 effector protein (Rho GTPase binding) 1
Tssr135290 15 78844872 to 78844874 2 - TSS region transcription start site region 135290
Lgals2 15 78850860 to 78855529 4669 - protein coding gene lectin, galactose-binding, soluble 2
Tssr131991 15 78850935 to 78850959 24 + TSS region transcription start site region 131991
Tssr131992 15 78850961 to 78850989 28 + TSS region transcription start site region 131992
Tssr135291 15 78850977 to 78850995 18 - TSS region transcription start site region 135291
Tssr135292 15 78851145 to 78851157 12 - TSS region transcription start site region 135292
Tssr135293 15 78851379 to 78851404 25 - TSS region transcription start site region 135293
Tssr135294 15 78855517 to 78855536 19 - TSS region transcription start site region 135294
Tssr135295 15 78855698 to 78855739 41 - TSS region transcription start site region 135295
Gm26634 15 78862956 to 78868533 5577 - lincRNA gene predicted gene, 26634
Cpgi7303 15 78876916 to 78878415 1499 CpG island CpG island 7303
Tssr135296 15 78877085 to 78877126 41 - TSS region transcription start site region 135296
Tssr131993 15 78877161 to 78877170 9 + TSS region transcription start site region 131993
Tssr131994 15 78877172 to 78877196 24 + TSS region transcription start site region 131994
Gga1 15 78877190 to 78894585 17395 + protein coding gene golgi associated, gamma adaptin ear containing, ARF binding protein 1
Tssr131995 15 78877249 to 78877264 15 + TSS region transcription start site region 131995
Tssr131996 15 78877297 to 78877315 18 + TSS region transcription start site region 131996
Tssr4651 15 78877455 to 78877482 27 - TSS region transcription start site region 4651
Tssr131997 15 78877541 to 78877585 44 + TSS region transcription start site region 131997
Tssr131998 15 78882125 to 78882155 30 + TSS region transcription start site region 131998
Tssr131999 15 78885283 to 78885320 37 + TSS region transcription start site region 131999
Tssr132000 15 78889741 to 78889790 49 + TSS region transcription start site region 132000
Tssr132001 15 78889801 to 78889817 16 + TSS region transcription start site region 132001
Tssr132002 15 78889820 to 78889834 14 + TSS region transcription start site region 132002
Mir6955 15 78891840 to 78891913 73 + miRNA gene microRNA 6955
Tssr132003 15 78892449 to 78892484 35 + TSS region transcription start site region 132003
Tssr132004 15 78899408 to 78899422 14 + TSS region transcription start site region 132004
Cpgi7304 15 78899419 to 78900261 842 CpG island CpG island 7304
Tssr135297 15 78899665 to 78899716 51 - TSS region transcription start site region 135297
Gm49510 15 78899667 to 78919032 19365 + protein coding gene predicted gene, 49510
Tssr132005 15 78899755 to 78899775 20 + TSS region transcription start site region 132005
Sh3bp1 15 78899768 to 78912051 12283 + protein coding gene SH3-domain binding protein 1
Tssr132006 15 78899783 to 78899815 32 + TSS region transcription start site region 132006
Tssr4652 15 78899822 to 78899827 5 + TSS region transcription start site region 4652
Tssr132007 15 78899844 to 78899853 9 + TSS region transcription start site region 132007