Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Scfq2 | 15 | 75256874 | QTL | subcutaneous fat pad weight QTL 2 | ||
Epfpq4 | 15 | 75256874 | QTL | epididymal fat percentage QTL 4 | ||
W3q7 | 15 | 75256874 | QTL | weight 3 weeks QTL 7 | ||
Tailaq4 | 15 | 75256874 | QTL | tail length adjusted QTL 4 | ||
Tailq6 | 15 | 75256874 | QTL | tail length QTL 6 | ||
Elfn2 | 15 | 51440 | - | protein coding gene | leucine rich repeat and fibronectin type III, extracellular 2 | |
Tssr135268 | 15 | 12 | - | TSS region | transcription start site region 135268 | |
Cpgi7296 | 15 | 1279 | CpG island | CpG island 7296 | ||
D15Mit1 | 15 | 183 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 1 | ||
Cpgi7297 | 15 | 1912 | CpG island | CpG island 7297 | ||
Tssr135269 | 15 | 48 | - | TSS region | transcription start site region 135269 | |
Tssr135270 | 15 | 40 | - | TSS region | transcription start site region 135270 | |
Tssr135271 | 15 | 21 | - | TSS region | transcription start site region 135271 | |
Tssr135272 | 15 | 34 | - | TSS region | transcription start site region 135272 | |
Tssr135273 | 15 | 16 | - | TSS region | transcription start site region 135273 | |
Mfng | 15 | 17593 | - | protein coding gene | MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase | |
Tssr135274 | 15 | 9 | - | TSS region | transcription start site region 135274 | |
Tssr135275 | 15 | 14 | - | TSS region | transcription start site region 135275 | |
Tssr135276 | 15 | 24 | - | TSS region | transcription start site region 135276 | |
Tssr135277 | 15 | 11 | - | TSS region | transcription start site region 135277 | |
Tssr135278 | 15 | 13 | - | TSS region | transcription start site region 135278 | |
Tssr131988 | 15 | 5 | + | TSS region | transcription start site region 131988 | |
Cpgi7298 | 15 | 221 | CpG island | CpG island 7298 | ||
Tssr135279 | 15 | 11 | - | TSS region | transcription start site region 135279 | |
Tssr135280 | 15 | 11 | - | TSS region | transcription start site region 135280 | |
Tssr135281 | 15 | 11 | - | TSS region | transcription start site region 135281 | |
Tssr135282 | 15 | 11 | - | TSS region | transcription start site region 135282 | |
Tssr135283 | 15 | 34 | - | TSS region | transcription start site region 135283 | |
Tssr135284 | 15 | 7 | - | TSS region | transcription start site region 135284 | |
Tssr4650 | 15 | 9 | - | TSS region | transcription start site region 4650 | |
Card10 | 15 | 27904 | - | protein coding gene | caspase recruitment domain family, member 10 | |
Tssr131989 | 15 | 28 | + | TSS region | transcription start site region 131989 | |
Cpgi7299 | 15 | 273 | CpG island | CpG island 7299 | ||
Cpgi7300 | 15 | 1907 | CpG island | CpG island 7300 | ||
Tssr135285 | 15 | 14 | - | TSS region | transcription start site region 135285 | |
Tssr135286 | 15 | 35 | - | TSS region | transcription start site region 135286 | |
Tssr135287 | 15 | 35 | - | TSS region | transcription start site region 135287 | |
Tssr135288 | 15 | 14 | - | TSS region | transcription start site region 135288 | |
Cpgi7301 | 15 | 222 | CpG island | CpG island 7301 | ||
Gm7318 | 15 | 592 | + | pseudogene | predicted gene 7318 | |
Tssr135289 | 15 | 1 | - | TSS region | transcription start site region 135289 | |
Cpgi7302 | 15 | 1332 | CpG island | CpG island 7302 | ||
Tssr131990 | 15 | 20 | + | TSS region | transcription start site region 131990 | |
Cdc42ep1 | 15 | 8255 | + | protein coding gene | CDC42 effector protein (Rho GTPase binding) 1 | |
Tssr135290 | 15 | 2 | - | TSS region | transcription start site region 135290 | |
Lgals2 | 15 | 4669 | - | protein coding gene | lectin, galactose-binding, soluble 2 | |
Tssr131991 | 15 | 24 | + | TSS region | transcription start site region 131991 | |
Tssr131992 | 15 | 28 | + | TSS region | transcription start site region 131992 | |
Tssr135291 | 15 | 18 | - | TSS region | transcription start site region 135291 | |
Tssr135292 | 15 | 12 | - | TSS region | transcription start site region 135292 | |
Tssr135293 | 15 | 25 | - | TSS region | transcription start site region 135293 | |
Tssr135294 | 15 | 19 | - | TSS region | transcription start site region 135294 | |
Tssr135295 | 15 | 41 | - | TSS region | transcription start site region 135295 | |
Gm26634 | 15 | 5577 | - | lincRNA gene | predicted gene, 26634 | |
Cpgi7303 | 15 | 1499 | CpG island | CpG island 7303 | ||
Tssr135296 | 15 | 41 | - | TSS region | transcription start site region 135296 | |
Tssr131993 | 15 | 9 | + | TSS region | transcription start site region 131993 | |
Tssr131994 | 15 | 24 | + | TSS region | transcription start site region 131994 | |
Gga1 | 15 | 17395 | + | protein coding gene | golgi associated, gamma adaptin ear containing, ARF binding protein 1 | |
Tssr131995 | 15 | 15 | + | TSS region | transcription start site region 131995 | |
Tssr131996 | 15 | 18 | + | TSS region | transcription start site region 131996 | |
Tssr4651 | 15 | 27 | - | TSS region | transcription start site region 4651 | |
Tssr131997 | 15 | 44 | + | TSS region | transcription start site region 131997 | |
Tssr131998 | 15 | 30 | + | TSS region | transcription start site region 131998 | |
Tssr131999 | 15 | 37 | + | TSS region | transcription start site region 131999 | |
Tssr132000 | 15 | 49 | + | TSS region | transcription start site region 132000 | |
Tssr132001 | 15 | 16 | + | TSS region | transcription start site region 132001 | |
Tssr132002 | 15 | 14 | + | TSS region | transcription start site region 132002 | |
Mir6955 | 15 | 73 | + | miRNA gene | microRNA 6955 | |
Tssr132003 | 15 | 35 | + | TSS region | transcription start site region 132003 | |
Tssr132004 | 15 | 14 | + | TSS region | transcription start site region 132004 | |
Cpgi7304 | 15 | 842 | CpG island | CpG island 7304 | ||
Tssr135297 | 15 | 51 | - | TSS region | transcription start site region 135297 | |
Gm49510 | 15 | 19365 | + | protein coding gene | predicted gene, 49510 | |
Tssr132005 | 15 | 20 | + | TSS region | transcription start site region 132005 | |
Sh3bp1 | 15 | 12283 | + | protein coding gene | SH3-domain binding protein 1 | |
Tssr132006 | 15 | 32 | + | TSS region | transcription start site region 132006 | |
Tssr4652 | 15 | 5 | + | TSS region | transcription start site region 4652 | |
Tssr132007 | 15 | 9 | + | TSS region | transcription start site region 132007 | |
Tssr132008 | 15 | 11 | + | TSS region | transcription start site region 132008 | |
Tssr132009 | 15 | 45 | + | TSS region | transcription start site region 132009 | |
Tssr132010 | 15 | 28 | + | TSS region | transcription start site region 132010 | |
1700027A07Rik | 15 | 1694 | - | antisense lncRNA gene | RIKEN cDNA 1700027A07 gene | |
Cpgi7305 | 15 | 1575 | CpG island | CpG island 7305 | ||
Tssr132011 | 15 | 3 | + | TSS region | transcription start site region 132011 | |
Tssr132012 | 15 | 11 | + | TSS region | transcription start site region 132012 | |
Pdxp | 15 | 5598 | + | protein coding gene | pyridoxal (pyridoxine, vitamin B6) phosphatase | |
Tssr132013 | 15 | 35 | + | TSS region | transcription start site region 132013 | |
Tssr132014 | 15 | 36 | + | TSS region | transcription start site region 132014 | |
Tssr132015 | 15 | 67 | + | TSS region | transcription start site region 132015 | |
Gm30368 | 15 | 8524 | - | lncRNA gene | predicted gene, 30368 | |
Tssr135298 | 15 | 2 | - | TSS region | transcription start site region 135298 | |
Tssr132016 | 15 | 15 | + | TSS region | transcription start site region 132016 | |
Lgals1 | 15 | 3740 | + | protein coding gene | lectin, galactose binding, soluble 1 | |
Tssr135299 | 15 | 11 | - | TSS region | transcription start site region 135299 | |
Cpgi7306 | 15 | 364 | CpG island | CpG island 7306 | ||
Tssr132017 | 15 | 31 | + | TSS region | transcription start site region 132017 | |
Tssr132018 | 15 | 32 | + | TSS region | transcription start site region 132018 | |
Tssr132019 | 15 | 42 | + | TSS region | transcription start site region 132019 | |
Tssr135300 | 15 | 14 | - | TSS region | transcription start site region 135300 | |
Tssr132020 | 15 | 19 | + | TSS region | transcription start site region 132020 | |
Cpgi7307 | 15 | 737 | CpG island | CpG island 7307 | ||
Tssr132021 | 15 | 73 | + | TSS region | transcription start site region 132021 | |
Nol12 | 15 | 6977 | + | protein coding gene | nucleolar protein 12 | |
Tssr132022 | 15 | 44 | + | TSS region | transcription start site region 132022 | |
Cpgi7308 | 15 | 505 | CpG island | CpG island 7308 | ||
Triobp | 15 | 58145 | + | protein coding gene | TRIO and F-actin binding protein | |
Tssr132023 | 15 | 7 | + | TSS region | transcription start site region 132023 | |
Tssr132024 | 15 | 23 | + | TSS region | transcription start site region 132024 | |
Tssr132025 | 15 | 9 | + | TSS region | transcription start site region 132025 | |
Tssr132026 | 15 | 13 | + | TSS region | transcription start site region 132026 | |
Tssr4653 | 15 | 11 | + | TSS region | transcription start site region 4653 | |
Tssr132027 | 15 | 20 | + | TSS region | transcription start site region 132027 | |
Tssr132028 | 15 | 3 | + | TSS region | transcription start site region 132028 | |
Tssr132029 | 15 | 3 | + | TSS region | transcription start site region 132029 | |
Cpgi7309 | 15 | 575 | CpG island | CpG island 7309 | ||
Tssr4654 | 15 | 8 | + | TSS region | transcription start site region 4654 | |
Cpgi7310 | 15 | 1136 | CpG island | CpG island 7310 | ||
Tssr132030 | 15 | 72 | + | TSS region | transcription start site region 132030 | |
Tssr132031 | 15 | 20 | + | TSS region | transcription start site region 132031 | |
Tssr132032 | 15 | 16 | + | TSS region | transcription start site region 132032 | |
Tssr132033 | 15 | 10 | + | TSS region | transcription start site region 132033 | |
Gm10865 | 15 | 16086 | - | antisense lncRNA gene | predicted gene 10865 | |
Mir6956 | 15 | 61 | + | miRNA gene | microRNA 6956 | |
Tssr132034 | 15 | 11 | + | TSS region | transcription start site region 132034 | |
Tssr132035 | 15 | 16 | + | TSS region | transcription start site region 132035 | |
Tssr132036 | 15 | 18 | + | TSS region | transcription start site region 132036 | |
Tssr132037 | 15 | 12 | + | TSS region | transcription start site region 132037 | |
Tssr132038 | 15 | 14 | + | TSS region | transcription start site region 132038 | |
Tssr132039 | 15 | 80 | + | TSS region | transcription start site region 132039 | |
Tssr132040 | 15 | 17 | + | TSS region | transcription start site region 132040 | |
D15Mit119 | 15 | 124 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 119 | ||
Gm17753 | 15 | 9857 | - | lincRNA gene | predicted gene, 17753 | |
Tssr135301 | 15 | 3 | - | TSS region | transcription start site region 135301 | |
Tssr135302 | 15 | 12 | - | TSS region | transcription start site region 135302 | |
Gm49544 | 15 | 2156 | - | antisense lncRNA gene | predicted gene, 49544 | |
Tssr132041 | 15 | 14 | + | TSS region | transcription start site region 132041 | |
Cpgi7311 | 15 | 1513 | CpG island | CpG island 7311 | ||
Tssr132042 | 15 | 14 | + | TSS region | transcription start site region 132042 | |
H1f0 | 15 | 2054 | + | protein coding gene | H1 histone family, member 0 | |
Tssr132043 | 15 | 11 | + | TSS region | transcription start site region 132043 | |
Tssr132044 | 15 | 13 | + | TSS region | transcription start site region 132044 | |
Tssr135303 | 15 | 65 | - | TSS region | transcription start site region 135303 | |
Tssr135304 | 15 | 26 | - | TSS region | transcription start site region 135304 | |
Tssr135305 | 15 | 50 | - | TSS region | transcription start site region 135305 | |
Tssr132045 | 15 | 32 | + | TSS region | transcription start site region 132045 | |
Cpgi7312 | 15 | 742 | CpG island | CpG island 7312 | ||
Tssr132046 | 15 | 10 | + | TSS region | transcription start site region 132046 | |
Gcat | 15 | 11657 | + | protein coding gene | glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) | |
Tssr132047 | 15 | 48 | + | TSS region | transcription start site region 132047 | |
Tssr132048 | 15 | 7 | + | TSS region | transcription start site region 132048 | |
Cpgi7313 | 15 | 405 | CpG island | CpG island 7313 | ||
Cpgi7314 | 15 | 258 | CpG island | CpG island 7314 | ||
Galr3 | 15 | 1673 | + | protein coding gene | galanin receptor 3 | |
Cpgi7315 | 15 | 1671 | CpG island | CpG island 7315 | ||
Gm3924 | 15 | 5577 | - | lincRNA gene | predicted gene 3924 | |
Ankrd54 | 15 | 9799 | - | protein coding gene | ankyrin repeat domain 54 | |
Cpgi7316 | 15 | 1008 | CpG island | CpG island 7316 | ||
Tssr135306 | 15 | 16 | - | TSS region | transcription start site region 135306 | |
Tssr135307 | 15 | 3 | - | TSS region | transcription start site region 135307 | |
Tssr135308 | 15 | 37 | - | TSS region | transcription start site region 135308 | |
Tssr135309 | 15 | 7 | - | TSS region | transcription start site region 135309 | |
Tssr135310 | 15 | 75 | - | TSS region | transcription start site region 135310 | |
Gm49471 | 15 | 1287 | + | unclassified gene | predicted gene, 49471 | |
4930563H03Rik | 15 | 410 | unclassified gene | RIKEN cDNA 4930563H03 gene | ||
Cpgi7317 | 15 | 637 | CpG island | CpG island 7317 | ||
Tssr132049 | 15 | 36 | + | TSS region | transcription start site region 132049 | |
Eif3l | 15 | 19177 | + | protein coding gene | eukaryotic translation initiation factor 3, subunit L | |
Tssr132050 | 15 | 46 | + | TSS region | transcription start site region 132050 | |
Tssr132051 | 15 | 15 | + | TSS region | transcription start site region 132051 | |
Tssr132052 | 15 | 20 | + | TSS region | transcription start site region 132052 | |
Tssr132053 | 15 | 52 | + | TSS region | transcription start site region 132053 | |
Gm25072 | 15 | 234 | - | unclassified non-coding RNA gene | predicted gene, 25072 | |
Cpgi7318 | 15 | 1379 | CpG island | CpG island 7318 | ||
Tssr135311 | 15 | 21 | - | TSS region | transcription start site region 135311 | |
Tssr132054 | 15 | 52 | + | TSS region | transcription start site region 132054 | |
Tssr132055 | 15 | 17 | + | TSS region | transcription start site region 132055 | |
Micall1 | 15 | 28002 | + | protein coding gene | microtubule associated monooxygenase, calponin and LIM domain containing -like 1 | |
Tssr132056 | 15 | 71 | + | TSS region | transcription start site region 132056 | |
Tssr135312 | 15 | 1 | - | TSS region | transcription start site region 135312 | |
Tssr132057 | 15 | 19 | + | TSS region | transcription start site region 132057 | |
Tssr132058 | 15 | 9 | + | TSS region | transcription start site region 132058 | |
Tssr132059 | 15 | 12 | + | TSS region | transcription start site region 132059 | |
Tssr132060 | 15 | 14 | + | TSS region | transcription start site region 132060 | |
Tssr132061 | 15 | 35 | + | TSS region | transcription start site region 132061 | |
Tssr132062 | 15 | 22 | + | TSS region | transcription start site region 132062 | |
Tssr135313 | 15 | 12 | - | TSS region | transcription start site region 135313 | |
Tssr132063 | 15 | 37 | + | TSS region | transcription start site region 132063 | |
Tssr132064 | 15 | 36 | + | TSS region | transcription start site region 132064 | |
1700088E04Rik | 15 | 6596 | - | protein coding gene | RIKEN cDNA 1700088E04 gene | |
D15Mit260 | 15 | 226 | DNA segment | DNA Segment, Chr 15 Massachusetts Institute of Technology 260 | ||
Cpgi7319 | 15 | 844 | CpG island | CpG island 7319 | ||
Tssr135314 | 15 | 71 | - | TSS region | transcription start site region 135314 | |
Tssr132065 | 15 | 11 | + | TSS region | transcription start site region 132065 | |
Tssr132066 | 15 | 34 | + | TSS region | transcription start site region 132066 | |
Polr2f | 15 | 10449 | + | protein coding gene | polymerase (RNA) II (DNA directed) polypeptide F | |
Tssr132067 | 15 | 26 | + | TSS region | transcription start site region 132067 | |
Tssr132068 | 15 | 15 | + | TSS region | transcription start site region 132068 | |
Sox10 | 15 | 9577 | - | protein coding gene | SRY (sex determining region Y)-box 10 | |
Tssr135315 | 15 | 13 | - | TSS region | transcription start site region 135315 |