Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78568462-78868510

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104 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Rac2 15 78559169 to 78572783 13614 - protein coding gene Rac family small GTPase 2
Tssr135250 15 78570774 to 78570806 32 - TSS region transcription start site region 135250
Cpgi7294 15 78571723 to 78572033 310 CpG island CpG island 7294
Tssr131969 15 78571798 to 78571811 13 + TSS region transcription start site region 131969
Tssr135251 15 78572668 to 78572675 7 - TSS region transcription start site region 135251
Tssr135252 15 78572686 to 78572690 4 - TSS region transcription start site region 135252
Tssr135253 15 78572709 to 78572750 41 - TSS region transcription start site region 135253
Tssr135254 15 78572754 to 78572790 36 - TSS region transcription start site region 135254
Tssr135255 15 78573165 to 78573204 39 - TSS region transcription start site region 135255
Tssr135256 15 78573214 to 78573229 15 - TSS region transcription start site region 135256
Gm36738 15 78574411 to 78581616 7205 - lincRNA gene predicted gene, 36738
D15Mit239 15 78576815 to 78576927 112 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 239
Tssr135257 15 78581563 to 78581621 58 - TSS region transcription start site region 135257
Cyth4 15 78597047 to 78622019 24972 + protein coding gene cytohesin 4
Tssr131970 15 78597112 to 78597121 9 + TSS region transcription start site region 131970
Tssr131971 15 78597133 to 78597152 19 + TSS region transcription start site region 131971
Tssr135258 15 78597768 to 78597787 19 - TSS region transcription start site region 135258
Tssr135259 15 78597940 to 78597974 34 - TSS region transcription start site region 135259
Tssr131972 15 78598059 to 78598117 58 + TSS region transcription start site region 131972
Tssr135260 15 78599187 to 78599223 36 - TSS region transcription start site region 135260
Tssr131973 15 78602712 to 78602733 21 + TSS region transcription start site region 131973
Tssr131974 15 78602770 to 78602787 17 + TSS region transcription start site region 131974
Tssr131975 15 78608115 to 78608128 13 + TSS region transcription start site region 131975
Tssr131976 15 78609814 to 78609835 21 + TSS region transcription start site region 131976
Tssr4648 15 78611414 to 78611425 11 + TSS region transcription start site region 4648
Tssr4649 15 78611427 to 78611507 80 + TSS region transcription start site region 4649
Tssr131977 15 78615740 to 78615749 9 + TSS region transcription start site region 131977
Tssr131978 15 78615761 to 78615780 19 + TSS region transcription start site region 131978
Tssr131979 15 78615822 to 78615837 15 + TSS region transcription start site region 131979
Tssr131980 15 78615839 to 78615850 11 + TSS region transcription start site region 131980
Tssr131981 15 78615926 to 78615952 26 + TSS region transcription start site region 131981
Tssr131982 15 78615974 to 78615983 9 + TSS region transcription start site region 131982
Tssr131983 15 78616295 to 78616483 188 + TSS region transcription start site region 131983
Gm36877 15 78638613 to 78645475 6862 - lncRNA gene predicted gene, 36877
Elfn2 15 78667331 to 78718771 51440 - protein coding gene leucine rich repeat and fibronectin type III, extracellular 2
Tssr135261 15 78670477 to 78670480 3 - TSS region transcription start site region 135261
Tssr135262 15 78670513 to 78670535 22 - TSS region transcription start site region 135262
Tssr135263 15 78670539 to 78670545 6 - TSS region transcription start site region 135263
Tssr135264 15 78670548 to 78670549 1 - TSS region transcription start site region 135264
Tssr131984 15 78670630 to 78670650 20 + TSS region transcription start site region 131984
Tssr131985 15 78670670 to 78670680 10 + TSS region transcription start site region 131985
Tssr131986 15 78670782 to 78670802 20 + TSS region transcription start site region 131986
Cpgi7295 15 78672153 to 78672724 571 CpG island CpG island 7295
Tssr135265 15 78673230 to 78673259 29 - TSS region transcription start site region 135265
Tssr135266 15 78673680 to 78673689 9 - TSS region transcription start site region 135266
1700041B01Rik 15 78674687 to 78676124 1437 + antisense lncRNA gene RIKEN cDNA 1700041B01 gene
Tssr131987 15 78687192 to 78687194 2 + TSS region transcription start site region 131987
V25Dq8 15 78700000 to 78700000 0 QTL vitamin D inactive form serum level QTL 8
Tssr135267 15 78710774 to 78710793 19 - TSS region transcription start site region 135267
Tssr135268 15 78710794 to 78710806 12 - TSS region transcription start site region 135268
Cpgi7296 15 78712132 to 78713411 1279 CpG island CpG island 7296
D15Mit1 15 78716903 to 78717086 183 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 1
Cpgi7297 15 78717843 to 78719755 1912 CpG island CpG island 7297
Tssr135269 15 78718462 to 78718510 48 - TSS region transcription start site region 135269
Tssr135270 15 78718515 to 78718555 40 - TSS region transcription start site region 135270
Tssr135271 15 78718556 to 78718577 21 - TSS region transcription start site region 135271
Tssr135272 15 78718845 to 78718879 34 - TSS region transcription start site region 135272
Tssr135273 15 78726748 to 78726764 16 - TSS region transcription start site region 135273
Mfng 15 78755882 to 78773475 17593 - protein coding gene MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Tssr135274 15 78770826 to 78770835 9 - TSS region transcription start site region 135274
Tssr135275 15 78770842 to 78770856 14 - TSS region transcription start site region 135275
Tssr135276 15 78770901 to 78770925 24 - TSS region transcription start site region 135276
Tssr135277 15 78770989 to 78771000 11 - TSS region transcription start site region 135277
Tssr135278 15 78771879 to 78771892 13 - TSS region transcription start site region 135278
Tssr131988 15 78772657 to 78772662 5 + TSS region transcription start site region 131988
Cpgi7298 15 78773058 to 78773279 221 CpG island CpG island 7298
Tssr135279 15 78773394 to 78773405 11 - TSS region transcription start site region 135279
Tssr135280 15 78773411 to 78773422 11 - TSS region transcription start site region 135280
Tssr135281 15 78773424 to 78773435 11 - TSS region transcription start site region 135281
Tssr135282 15 78773440 to 78773451 11 - TSS region transcription start site region 135282
Tssr135283 15 78773452 to 78773486 34 - TSS region transcription start site region 135283
Tssr135284 15 78773502 to 78773509 7 - TSS region transcription start site region 135284
Tssr4650 15 78774880 to 78774889 9 - TSS region transcription start site region 4650
Card10 15 78775138 to 78803042 27904 - protein coding gene caspase recruitment domain family, member 10
Tssr131989 15 78779555 to 78779583 28 + TSS region transcription start site region 131989
Cpgi7299 15 78799104 to 78799377 273 CpG island CpG island 7299
Cpgi7300 15 78801927 to 78803834 1907 CpG island CpG island 7300
Tssr135285 15 78802870 to 78802884 14 - TSS region transcription start site region 135285
Tssr135286 15 78802885 to 78802920 35 - TSS region transcription start site region 135286
Tssr135287 15 78803015 to 78803050 35 - TSS region transcription start site region 135287
Tssr135288 15 78804364 to 78804378 14 - TSS region transcription start site region 135288
Cpgi7301 15 78820699 to 78820921 222 CpG island CpG island 7301
Gm7318 15 78820810 to 78821402 592 + pseudogene predicted gene 7318
Tssr135289 15 78837816 to 78837817 1 - TSS region transcription start site region 135289
Cpgi7302 15 78842099 to 78843431 1332 CpG island CpG island 7302
Tssr131990 15 78842632 to 78842652 20 + TSS region transcription start site region 131990
Cdc42ep1 15 78842647 to 78850902 8255 + protein coding gene CDC42 effector protein (Rho GTPase binding) 1
Tssr135290 15 78844872 to 78844874 2 - TSS region transcription start site region 135290
Lgals2 15 78850860 to 78855529 4669 - protein coding gene lectin, galactose-binding, soluble 2
Tssr131991 15 78850935 to 78850959 24 + TSS region transcription start site region 131991
Tssr131992 15 78850961 to 78850989 28 + TSS region transcription start site region 131992
Tssr135291 15 78850977 to 78850995 18 - TSS region transcription start site region 135291
Tssr135292 15 78851145 to 78851157 12 - TSS region transcription start site region 135292
Tssr135293 15 78851379 to 78851404 25 - TSS region transcription start site region 135293
Tssr135294 15 78855517 to 78855536 19 - TSS region transcription start site region 135294
Tssr135295 15 78855698 to 78855739 41 - TSS region transcription start site region 135295
Gm26634 15 78862956 to 78868533 5577 - lincRNA gene predicted gene, 26634
W3q6 15 102993272 to 78716903 -24276369 QTL weight 3 weeks QTL 6
Epfpq3 15 102993272 to 78716903 -24276369 QTL epididymal fat percentage QTL 3