Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 15:78497047-78722019

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102 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Tssr135231 15 78511605 to 78511616 11 - TSS region transcription start site region 135231
Tssr135232 15 78512456 to 78512476 20 - TSS region transcription start site region 135232
C1qtnf6 15 78523346 to 78531416 8070 - protein coding gene C1q and tumor necrosis factor related protein 6
Tssr135233 15 78529559 to 78529570 11 - TSS region transcription start site region 135233
Tssr135234 15 78529580 to 78529605 25 - TSS region transcription start site region 135234
Tssr135235 15 78529609 to 78529612 3 - TSS region transcription start site region 135235
Tssr135236 15 78529617 to 78529636 19 - TSS region transcription start site region 135236
Tssr135237 15 78529642 to 78529661 19 - TSS region transcription start site region 135237
Tssr131960 15 78531087 to 78531116 29 + TSS region transcription start site region 131960
Gm49490 15 78531109 to 78532797 1688 + lncRNA gene predicted gene, 49490
Cpgi7290 15 78531990 to 78532459 469 CpG island CpG island 7290
Sstr3 15 78537008 to 78544685 7677 - protein coding gene somatostatin receptor 3
Cpgi7291 15 78539373 to 78540255 882 CpG island CpG island 7291
Cpgi7292 15 78544228 to 78544417 189 CpG island CpG island 7292
Tssr135238 15 78544643 to 78544658 15 - TSS region transcription start site region 135238
Tssr135239 15 78544666 to 78544686 20 - TSS region transcription start site region 135239
Tssr135240 15 78549352 to 78549384 32 - TSS region transcription start site region 135240
Gm6723 15 78554408 to 78554848 440 - pseudogene predicted pseudogene 6723
Cpgi7293 15 78554495 to 78554983 488 CpG island CpG island 7293
Tssr131961 15 78558836 to 78558841 5 + TSS region transcription start site region 131961
Rac2 15 78559169 to 78572783 13614 - protein coding gene Rac family small GTPase 2
Tssr131962 15 78560873 to 78560885 12 + TSS region transcription start site region 131962
Tssr131963 15 78560988 to 78561019 31 + TSS region transcription start site region 131963
Tssr135241 15 78561001 to 78561048 47 - TSS region transcription start site region 135241
Tssr131964 15 78561198 to 78561227 29 + TSS region transcription start site region 131964
Tssr135242 15 78561202 to 78561214 12 - TSS region transcription start site region 135242
Tssr135243 15 78561224 to 78561233 9 - TSS region transcription start site region 135243
Tssr135244 15 78561403 to 78561417 14 - TSS region transcription start site region 135244
Tssr131965 15 78561412 to 78561436 24 + TSS region transcription start site region 131965
Tssr135245 15 78561465 to 78561490 25 - TSS region transcription start site region 135245
Tssr131966 15 78561912 to 78561952 40 + TSS region transcription start site region 131966
Tssr135246 15 78561946 to 78562000 54 - TSS region transcription start site region 135246
Tssr131967 15 78564908 to 78564968 60 + TSS region transcription start site region 131967
Tssr135247 15 78564985 to 78565030 45 - TSS region transcription start site region 135247
Tssr135248 15 78565944 to 78565957 13 - TSS region transcription start site region 135248
Tssr135249 15 78565963 to 78565981 18 - TSS region transcription start site region 135249
Tssr131968 15 78565978 to 78565996 18 + TSS region transcription start site region 131968
Tssr135250 15 78570774 to 78570806 32 - TSS region transcription start site region 135250
Cpgi7294 15 78571723 to 78572033 310 CpG island CpG island 7294
Tssr131969 15 78571798 to 78571811 13 + TSS region transcription start site region 131969
Tssr135251 15 78572668 to 78572675 7 - TSS region transcription start site region 135251
Tssr135252 15 78572686 to 78572690 4 - TSS region transcription start site region 135252
Tssr135253 15 78572709 to 78572750 41 - TSS region transcription start site region 135253
Tssr135254 15 78572754 to 78572790 36 - TSS region transcription start site region 135254
Tssr135255 15 78573165 to 78573204 39 - TSS region transcription start site region 135255
Tssr135256 15 78573214 to 78573229 15 - TSS region transcription start site region 135256
Gm36738 15 78574411 to 78581589 7178 - lncRNA gene predicted gene, 36738
D15Mit239 15 78576815 to 78576927 112 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 239
Tssr135257 15 78581563 to 78581621 58 - TSS region transcription start site region 135257
Cyth4 15 78597047 to 78622019 24972 + protein coding gene cytohesin 4
Tssr131970 15 78597112 to 78597121 9 + TSS region transcription start site region 131970
Tssr131971 15 78597133 to 78597152 19 + TSS region transcription start site region 131971
Tssr135258 15 78597768 to 78597787 19 - TSS region transcription start site region 135258
Tssr135259 15 78597940 to 78597974 34 - TSS region transcription start site region 135259
Tssr131972 15 78598059 to 78598117 58 + TSS region transcription start site region 131972
Gm52186 15 78598566 to 78609803 11237 - lncRNA gene predicted gene, 52186
Tssr135260 15 78599187 to 78599223 36 - TSS region transcription start site region 135260
Tssr131973 15 78602712 to 78602733 21 + TSS region transcription start site region 131973
Tssr131974 15 78602770 to 78602787 17 + TSS region transcription start site region 131974
Tssr131975 15 78608115 to 78608128 13 + TSS region transcription start site region 131975
Tssr131976 15 78609814 to 78609835 21 + TSS region transcription start site region 131976
Tssr4648 15 78611414 to 78611425 11 + TSS region transcription start site region 4648
Tssr4649 15 78611427 to 78611507 80 + TSS region transcription start site region 4649
Tssr131977 15 78615740 to 78615749 9 + TSS region transcription start site region 131977
Tssr131978 15 78615761 to 78615780 19 + TSS region transcription start site region 131978
Tssr131979 15 78615822 to 78615837 15 + TSS region transcription start site region 131979
Tssr131980 15 78615839 to 78615850 11 + TSS region transcription start site region 131980
Tssr131981 15 78615926 to 78615952 26 + TSS region transcription start site region 131981
Tssr131982 15 78615974 to 78615983 9 + TSS region transcription start site region 131982
Tssr131983 15 78616295 to 78616483 188 + TSS region transcription start site region 131983
Gm52187 15 78627028 to 78629224 2196 - lncRNA gene predicted gene, 52187
Elfn2 15 78667333 to 78718771 51438 - protein coding gene leucine rich repeat and fibronectin type III, extracellular 2
Tssr135261 15 78670477 to 78670480 3 - TSS region transcription start site region 135261
Tssr135262 15 78670513 to 78670535 22 - TSS region transcription start site region 135262
Tssr135263 15 78670539 to 78670545 6 - TSS region transcription start site region 135263
Tssr135264 15 78670548 to 78670549 1 - TSS region transcription start site region 135264
Tssr131984 15 78670630 to 78670650 20 + TSS region transcription start site region 131984
Tssr131985 15 78670670 to 78670680 10 + TSS region transcription start site region 131985
Tssr131986 15 78670782 to 78670802 20 + TSS region transcription start site region 131986
1700041B01Rik 15 78670785 to 78676114 5329 + lncRNA gene RIKEN cDNA 1700041B01 gene
Cpgi7295 15 78672153 to 78672724 571 CpG island CpG island 7295
Tssr135265 15 78673230 to 78673259 29 - TSS region transcription start site region 135265
Tssr135266 15 78673680 to 78673689 9 - TSS region transcription start site region 135266
Gm52188 15 78687091 to 78693191 6100 + lncRNA gene predicted gene, 52188
Tssr131987 15 78687192 to 78687194 2 + TSS region transcription start site region 131987
V25Dq8 15 78700000 to 78700000 0 QTL vitamin D inactive form serum level QTL 8
Tssr135267 15 78710774 to 78710793 19 - TSS region transcription start site region 135267
Tssr135268 15 78710794 to 78710806 12 - TSS region transcription start site region 135268
Cpgi7296 15 78712132 to 78713411 1279 CpG island CpG island 7296
D15Mit1 15 78716903 to 78717086 183 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 1
Cpgi7297 15 78717843 to 78719755 1912 CpG island CpG island 7297
Tssr135269 15 78718462 to 78718510 48 - TSS region transcription start site region 135269
Tssr135270 15 78718515 to 78718555 40 - TSS region transcription start site region 135270
Tssr135271 15 78718556 to 78718577 21 - TSS region transcription start site region 135271
Tssr135272 15 78718845 to 78718879 34 - TSS region transcription start site region 135272
Epfpq3 15 102993272 to 78716903 -24276369 QTL epididymal fat percentage QTL 3
W3q6 15 102993272 to 78716903 -24276369 QTL weight 3 weeks QTL 6