Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78423869-78563882

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41355 15 78416889 to 78426230 9341 + lncRNA gene predicted gene, 41355
Gm36644 15 78420496 to 78424193 3697 - lincRNA gene predicted gene, 36644
Cpgi7288 15 78428267 to 78429150 883 CpG island CpG island 7288
Tssr131952 15 78428447 to 78428457 10 + TSS region transcription start site region 131952
Kctd17 15 78428564 to 78439303 10739 + protein coding gene potassium channel tetramerisation domain containing 17
Tssr131953 15 78428625 to 78428636 11 + TSS region transcription start site region 131953
Tssr131954 15 78428650 to 78428671 21 + TSS region transcription start site region 131954
Tssr131955 15 78430117 to 78430127 10 + TSS region transcription start site region 131955
Cpgi7289 15 78436624 to 78437331 707 CpG island CpG island 7289
Tssr131956 15 78437112 to 78437145 33 + TSS region transcription start site region 131956
Tmprss6 15 78439667 to 78468634 28967 - protein coding gene transmembrane serine protease 6
Tssr131957 15 78449380 to 78449386 6 + TSS region transcription start site region 131957
Tssr135218 15 78468449 to 78468460 11 - TSS region transcription start site region 135218
Tssr135219 15 78468463 to 78468485 22 - TSS region transcription start site region 135219
Tssr135220 15 78468620 to 78468646 26 - TSS region transcription start site region 135220
Tssr135221 15 78468658 to 78468681 23 - TSS region transcription start site region 135221
Il2rb 15 78479256 to 78495271 16015 - protein coding gene interleukin 2 receptor, beta chain
Tssr135222 15 78481676 to 78481714 38 - TSS region transcription start site region 135222
Tssr135223 15 78493607 to 78493617 10 - TSS region transcription start site region 135223
Tssr135224 15 78493726 to 78493747 21 - TSS region transcription start site region 135224
Tssr131958 15 78493851 to 78493860 9 + TSS region transcription start site region 131958
Tssr131959 15 78493869 to 78493882 13 + TSS region transcription start site region 131959
Tssr135225 15 78494358 to 78494369 11 - TSS region transcription start site region 135225
Tssr135226 15 78494372 to 78494381 9 - TSS region transcription start site region 135226
Tssr135227 15 78495037 to 78495048 11 - TSS region transcription start site region 135227
Tssr135228 15 78495059 to 78495073 14 - TSS region transcription start site region 135228
Tssr135229 15 78495212 to 78495223 11 - TSS region transcription start site region 135229
Tssr135230 15 78495241 to 78495251 10 - TSS region transcription start site region 135230
Tssr135231 15 78511605 to 78511616 11 - TSS region transcription start site region 135231
Tssr135232 15 78512456 to 78512476 20 - TSS region transcription start site region 135232
C1qtnf6 15 78523346 to 78531416 8070 - protein coding gene C1q and tumor necrosis factor related protein 6
Tssr135233 15 78529559 to 78529570 11 - TSS region transcription start site region 135233
Tssr135234 15 78529580 to 78529605 25 - TSS region transcription start site region 135234
Tssr135235 15 78529609 to 78529612 3 - TSS region transcription start site region 135235
Tssr135236 15 78529617 to 78529636 19 - TSS region transcription start site region 135236
Tssr135237 15 78529642 to 78529661 19 - TSS region transcription start site region 135237
Tssr131960 15 78531087 to 78531116 29 + TSS region transcription start site region 131960
Gm49490 15 78531109 to 78532797 1688 + antisense lncRNA gene predicted gene, 49490
Cpgi7290 15 78531990 to 78532459 469 CpG island CpG island 7290
Sstr3 15 78537008 to 78544685 7677 - protein coding gene somatostatin receptor 3
Cpgi7291 15 78539373 to 78540255 882 CpG island CpG island 7291
Cpgi7292 15 78544228 to 78544417 189 CpG island CpG island 7292
Tssr135238 15 78544643 to 78544658 15 - TSS region transcription start site region 135238
Tssr135239 15 78544666 to 78544686 20 - TSS region transcription start site region 135239
Tssr135240 15 78549352 to 78549384 32 - TSS region transcription start site region 135240
Gm6723 15 78554408 to 78554848 440 - pseudogene predicted pseudogene 6723
Cpgi7293 15 78554495 to 78554983 488 CpG island CpG island 7293
Tssr131961 15 78558836 to 78558841 5 + TSS region transcription start site region 131961
Rac2 15 78559169 to 78572783 13614 - protein coding gene Rac family small GTPase 2
Tssr131962 15 78560873 to 78560885 12 + TSS region transcription start site region 131962
Tssr131963 15 78560988 to 78561019 31 + TSS region transcription start site region 131963
Tssr135241 15 78561001 to 78561048 47 - TSS region transcription start site region 135241
Tssr131964 15 78561198 to 78561227 29 + TSS region transcription start site region 131964
Tssr135242 15 78561202 to 78561214 12 - TSS region transcription start site region 135242
Tssr135243 15 78561224 to 78561233 9 - TSS region transcription start site region 135243
Tssr135244 15 78561403 to 78561417 14 - TSS region transcription start site region 135244
Tssr131965 15 78561412 to 78561436 24 + TSS region transcription start site region 131965
Tssr135245 15 78561465 to 78561490 25 - TSS region transcription start site region 135245
Tssr131966 15 78561912 to 78561952 40 + TSS region transcription start site region 131966
Tssr135246 15 78561946 to 78562000 54 - TSS region transcription start site region 135246