Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78384352-78714384

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139 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tex33 15 78378400 to 78395912 17512 - protein coding gene testis expressed 33
Tssr135209 15 78388738 to 78388749 11 - TSS region transcription start site region 135209
Tssr135210 15 78388757 to 78388776 19 - TSS region transcription start site region 135210
Tssr135211 15 78390265 to 78390274 9 - TSS region transcription start site region 135211
Tssr135212 15 78395876 to 78395893 17 - TSS region transcription start site region 135212
Tssr135213 15 78395899 to 78395914 15 - TSS region transcription start site region 135213
Gm49481 15 78396001 to 78397184 1183 + bidirectional promoter lncRNA gene predicted gene, 49481
Tst 15 78399556 to 78405859 6303 - protein coding gene thiosulfate sulfurtransferase, mitochondrial
Tssr135214 15 78405356 to 78405381 25 - TSS region transcription start site region 135214
Cpgi7286 15 78405516 to 78406945 1429 CpG island CpG island 7286
Tssr135215 15 78405824 to 78405917 93 - TSS region transcription start site region 135215
Tssr135216 15 78405985 to 78405993 8 - TSS region transcription start site region 135216
Tssr131943 15 78406183 to 78406187 4 + TSS region transcription start site region 131943
Tssr135217 15 78406410 to 78406416 6 - TSS region transcription start site region 135217
Tssr131944 15 78406695 to 78406732 37 + TSS region transcription start site region 131944
Mpst 15 78406712 to 78414015 7303 + protein coding gene mercaptopyruvate sulfurtransferase
Tssr131945 15 78406777 to 78406796 19 + TSS region transcription start site region 131945
Tssr131946 15 78409713 to 78409728 15 + TSS region transcription start site region 131946
Tssr131947 15 78409739 to 78409748 9 + TSS region transcription start site region 131947
Tssr131948 15 78409760 to 78409776 16 + TSS region transcription start site region 131948
Cpgi7287 15 78409872 to 78410773 901 CpG island CpG island 7287
Tssr131949 15 78409910 to 78409922 12 + TSS region transcription start site region 131949
Tssr131950 15 78409954 to 78410038 84 + TSS region transcription start site region 131950
Tssr131951 15 78410279 to 78410284 5 + TSS region transcription start site region 131951
Gm41355 15 78416889 to 78426230 9341 + lncRNA gene predicted gene, 41355
Gm36644 15 78420496 to 78424193 3697 - lincRNA gene predicted gene, 36644
Cpgi7288 15 78428267 to 78429150 883 CpG island CpG island 7288
Tssr131952 15 78428447 to 78428457 10 + TSS region transcription start site region 131952
Kctd17 15 78428564 to 78439303 10739 + protein coding gene potassium channel tetramerisation domain containing 17
Tssr131953 15 78428625 to 78428636 11 + TSS region transcription start site region 131953
Tssr131954 15 78428650 to 78428671 21 + TSS region transcription start site region 131954
Tssr131955 15 78430117 to 78430127 10 + TSS region transcription start site region 131955
Cpgi7289 15 78436624 to 78437331 707 CpG island CpG island 7289
Tssr131956 15 78437112 to 78437145 33 + TSS region transcription start site region 131956
Tmprss6 15 78439667 to 78468634 28967 - protein coding gene transmembrane serine protease 6
Tssr131957 15 78449380 to 78449386 6 + TSS region transcription start site region 131957
Tssr135218 15 78468449 to 78468460 11 - TSS region transcription start site region 135218
Tssr135219 15 78468463 to 78468485 22 - TSS region transcription start site region 135219
Tssr135220 15 78468620 to 78468646 26 - TSS region transcription start site region 135220
Tssr135221 15 78468658 to 78468681 23 - TSS region transcription start site region 135221
Il2rb 15 78479256 to 78495271 16015 - protein coding gene interleukin 2 receptor, beta chain
Tssr135222 15 78481676 to 78481714 38 - TSS region transcription start site region 135222
Tssr135223 15 78493607 to 78493617 10 - TSS region transcription start site region 135223
Tssr135224 15 78493726 to 78493747 21 - TSS region transcription start site region 135224
Tssr131958 15 78493851 to 78493860 9 + TSS region transcription start site region 131958
Tssr131959 15 78493869 to 78493882 13 + TSS region transcription start site region 131959
Tssr135225 15 78494358 to 78494369 11 - TSS region transcription start site region 135225
Tssr135226 15 78494372 to 78494381 9 - TSS region transcription start site region 135226
Tssr135227 15 78495037 to 78495048 11 - TSS region transcription start site region 135227
Tssr135228 15 78495059 to 78495073 14 - TSS region transcription start site region 135228
Tssr135229 15 78495212 to 78495223 11 - TSS region transcription start site region 135229
Tssr135230 15 78495241 to 78495251 10 - TSS region transcription start site region 135230
Tssr135231 15 78511605 to 78511616 11 - TSS region transcription start site region 135231
Tssr135232 15 78512456 to 78512476 20 - TSS region transcription start site region 135232
C1qtnf6 15 78523346 to 78531416 8070 - protein coding gene C1q and tumor necrosis factor related protein 6
Tssr135233 15 78529559 to 78529570 11 - TSS region transcription start site region 135233
Tssr135234 15 78529580 to 78529605 25 - TSS region transcription start site region 135234
Tssr135235 15 78529609 to 78529612 3 - TSS region transcription start site region 135235
Tssr135236 15 78529617 to 78529636 19 - TSS region transcription start site region 135236
Tssr135237 15 78529642 to 78529661 19 - TSS region transcription start site region 135237
Tssr131960 15 78531087 to 78531116 29 + TSS region transcription start site region 131960
Gm49490 15 78531109 to 78532797 1688 + antisense lncRNA gene predicted gene, 49490
Cpgi7290 15 78531990 to 78532459 469 CpG island CpG island 7290
Sstr3 15 78537008 to 78544685 7677 - protein coding gene somatostatin receptor 3
Cpgi7291 15 78539373 to 78540255 882 CpG island CpG island 7291
Cpgi7292 15 78544228 to 78544417 189 CpG island CpG island 7292
Tssr135238 15 78544643 to 78544658 15 - TSS region transcription start site region 135238
Tssr135239 15 78544666 to 78544686 20 - TSS region transcription start site region 135239
Tssr135240 15 78549352 to 78549384 32 - TSS region transcription start site region 135240
Gm6723 15 78554408 to 78554848 440 - pseudogene predicted pseudogene 6723
Cpgi7293 15 78554495 to 78554983 488 CpG island CpG island 7293
Tssr131961 15 78558836 to 78558841 5 + TSS region transcription start site region 131961
Rac2 15 78559169 to 78572783 13614 - protein coding gene Rac family small GTPase 2
Tssr131962 15 78560873 to 78560885 12 + TSS region transcription start site region 131962
Tssr131963 15 78560988 to 78561019 31 + TSS region transcription start site region 131963
Tssr135241 15 78561001 to 78561048 47 - TSS region transcription start site region 135241
Tssr131964 15 78561198 to 78561227 29 + TSS region transcription start site region 131964
Tssr135242 15 78561202 to 78561214 12 - TSS region transcription start site region 135242
Tssr135243 15 78561224 to 78561233 9 - TSS region transcription start site region 135243
Tssr135244 15 78561403 to 78561417 14 - TSS region transcription start site region 135244
Tssr131965 15 78561412 to 78561436 24 + TSS region transcription start site region 131965
Tssr135245 15 78561465 to 78561490 25 - TSS region transcription start site region 135245
Tssr131966 15 78561912 to 78561952 40 + TSS region transcription start site region 131966
Tssr135246 15 78561946 to 78562000 54 - TSS region transcription start site region 135246
Tssr131967 15 78564908 to 78564968 60 + TSS region transcription start site region 131967
Tssr135247 15 78564985 to 78565030 45 - TSS region transcription start site region 135247
Tssr135248 15 78565944 to 78565957 13 - TSS region transcription start site region 135248
Tssr135249 15 78565963 to 78565981 18 - TSS region transcription start site region 135249
Tssr131968 15 78565978 to 78565996 18 + TSS region transcription start site region 131968
Tssr135250 15 78570774 to 78570806 32 - TSS region transcription start site region 135250
Cpgi7294 15 78571723 to 78572033 310 CpG island CpG island 7294
Tssr131969 15 78571798 to 78571811 13 + TSS region transcription start site region 131969
Tssr135251 15 78572668 to 78572675 7 - TSS region transcription start site region 135251
Tssr135252 15 78572686 to 78572690 4 - TSS region transcription start site region 135252
Tssr135253 15 78572709 to 78572750 41 - TSS region transcription start site region 135253
Tssr135254 15 78572754 to 78572790 36 - TSS region transcription start site region 135254
Tssr135255 15 78573165 to 78573204 39 - TSS region transcription start site region 135255
Tssr135256 15 78573214 to 78573229 15 - TSS region transcription start site region 135256
Gm36738 15 78574411 to 78581616 7205 - lincRNA gene predicted gene, 36738
D15Mit239 15 78576815 to 78576927 112 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 239
Tssr135257 15 78581563 to 78581621 58 - TSS region transcription start site region 135257
Cyth4 15 78597047 to 78622019 24972 + protein coding gene cytohesin 4
Tssr131970 15 78597112 to 78597121 9 + TSS region transcription start site region 131970
Tssr131971 15 78597133 to 78597152 19 + TSS region transcription start site region 131971
Tssr135258 15 78597768 to 78597787 19 - TSS region transcription start site region 135258
Tssr135259 15 78597940 to 78597974 34 - TSS region transcription start site region 135259
Tssr131972 15 78598059 to 78598117 58 + TSS region transcription start site region 131972
Tssr135260 15 78599187 to 78599223 36 - TSS region transcription start site region 135260
Tssr131973 15 78602712 to 78602733 21 + TSS region transcription start site region 131973
Tssr131974 15 78602770 to 78602787 17 + TSS region transcription start site region 131974
Tssr131975 15 78608115 to 78608128 13 + TSS region transcription start site region 131975
Tssr131976 15 78609814 to 78609835 21 + TSS region transcription start site region 131976
Tssr4648 15 78611414 to 78611425 11 + TSS region transcription start site region 4648
Tssr4649 15 78611427 to 78611507 80 + TSS region transcription start site region 4649
Tssr131977 15 78615740 to 78615749 9 + TSS region transcription start site region 131977
Tssr131978 15 78615761 to 78615780 19 + TSS region transcription start site region 131978
Tssr131979 15 78615822 to 78615837 15 + TSS region transcription start site region 131979
Tssr131980 15 78615839 to 78615850 11 + TSS region transcription start site region 131980
Tssr131981 15 78615926 to 78615952 26 + TSS region transcription start site region 131981
Tssr131982 15 78615974 to 78615983 9 + TSS region transcription start site region 131982
Tssr131983 15 78616295 to 78616483 188 + TSS region transcription start site region 131983
Gm36877 15 78638613 to 78645475 6862 - lncRNA gene predicted gene, 36877
Elfn2 15 78667331 to 78718771 51440 - protein coding gene leucine rich repeat and fibronectin type III, extracellular 2
Tssr135261 15 78670477 to 78670480 3 - TSS region transcription start site region 135261
Tssr135262 15 78670513 to 78670535 22 - TSS region transcription start site region 135262
Tssr135263 15 78670539 to 78670545 6 - TSS region transcription start site region 135263
Tssr135264 15 78670548 to 78670549 1 - TSS region transcription start site region 135264
Tssr131984 15 78670630 to 78670650 20 + TSS region transcription start site region 131984
Tssr131985 15 78670670 to 78670680 10 + TSS region transcription start site region 131985
Tssr131986 15 78670782 to 78670802 20 + TSS region transcription start site region 131986
Cpgi7295 15 78672153 to 78672724 571 CpG island CpG island 7295
Tssr135265 15 78673230 to 78673259 29 - TSS region transcription start site region 135265
Tssr135266 15 78673680 to 78673689 9 - TSS region transcription start site region 135266
1700041B01Rik 15 78674687 to 78676124 1437 + antisense lncRNA gene RIKEN cDNA 1700041B01 gene
Tssr131987 15 78687192 to 78687194 2 + TSS region transcription start site region 131987
V25Dq8 15 78700000 to 78700000 0 QTL vitamin D inactive form serum level QTL 8
Tssr135267 15 78710774 to 78710793 19 - TSS region transcription start site region 135267
Tssr135268 15 78710794 to 78710806 12 - TSS region transcription start site region 135268
Cpgi7296 15 78712132 to 78713411 1279 CpG island CpG island 7296