Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78253067-78443079

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncf4 15 78244801 to 78262580 17779 + protein coding gene neutrophil cytosolic factor 4
Tssr131904 15 78253221 to 78253233 12 + TSS region transcription start site region 131904
Tssr131905 15 78253272 to 78253303 31 + TSS region transcription start site region 131905
Cpgi7285 15 78254736 to 78255018 282 CpG island CpG island 7285
Tssr131906 15 78254864 to 78254894 30 + TSS region transcription start site region 131906
Tssr131907 15 78260688 to 78260707 19 + TSS region transcription start site region 131907
Tssr131908 15 78260902 to 78260927 25 + TSS region transcription start site region 131908
Tssr131909 15 78261269 to 78261308 39 + TSS region transcription start site region 131909
Tssr131910 15 78261351 to 78261365 14 + TSS region transcription start site region 131910
Tssr131911 15 78261469 to 78261498 29 + TSS region transcription start site region 131911
Csf2rb2 15 78282507 to 78305721 23214 - protein coding gene colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
Tssr135192 15 78283046 to 78283059 13 - TSS region transcription start site region 135192
Tssr135193 15 78284120 to 78284151 31 - TSS region transcription start site region 135193
Tssr135194 15 78284164 to 78284189 25 - TSS region transcription start site region 135194
Tssr135195 15 78284340 to 78284351 11 - TSS region transcription start site region 135195
Tssr135196 15 78284377 to 78284412 35 - TSS region transcription start site region 135196
Mir7676-1 15 78284788 to 78284849 61 - miRNA gene microRNA 7676-1
Tssr135197 15 78285144 to 78285174 30 - TSS region transcription start site region 135197
Tssr135198 15 78285215 to 78285252 37 - TSS region transcription start site region 135198
Tssr135199 15 78287946 to 78287968 22 - TSS region transcription start site region 135199
Tssr135200 15 78291656 to 78291682 26 - TSS region transcription start site region 135200
Tssr135201 15 78297009 to 78297020 11 - TSS region transcription start site region 135201
Tssr135202 15 78298080 to 78298092 12 - TSS region transcription start site region 135202
Tssr135203 15 78298179 to 78298204 25 - TSS region transcription start site region 135203
Tssr135204 15 78305638 to 78305670 32 - TSS region transcription start site region 135204
Tssr135205 15 78305717 to 78305730 13 - TSS region transcription start site region 135205
Tssr135206 15 78314517 to 78314530 13 - TSS region transcription start site region 135206
Tssr131912 15 78317047 to 78317059 12 + TSS region transcription start site region 131912
Tssr131913 15 78325723 to 78325750 27 + TSS region transcription start site region 131913
Csf2rb 15 78325798 to 78351001 25203 + protein coding gene colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
Tssr131914 15 78325816 to 78325837 21 + TSS region transcription start site region 131914
Tssr131915 15 78325841 to 78325862 21 + TSS region transcription start site region 131915
Tssr131916 15 78326005 to 78326025 20 + TSS region transcription start site region 131916
Tssr131917 15 78326044 to 78326059 15 + TSS region transcription start site region 131917
Tssr131918 15 78329709 to 78329754 45 + TSS region transcription start site region 131918
Tssr131919 15 78331718 to 78331739 21 + TSS region transcription start site region 131919
Tssr131920 15 78331864 to 78331893 29 + TSS region transcription start site region 131920
Tssr131921 15 78334048 to 78334063 15 + TSS region transcription start site region 131921
Tssr131922 15 78335143 to 78335163 20 + TSS region transcription start site region 131922
Tssr131923 15 78335230 to 78335283 53 + TSS region transcription start site region 131923
Tssr131924 15 78335284 to 78335302 18 + TSS region transcription start site region 131924
Tssr131925 15 78336341 to 78336348 7 + TSS region transcription start site region 131925
Tssr135207 15 78336384 to 78336406 22 - TSS region transcription start site region 135207
Tssr135208 15 78336416 to 78336428 12 - TSS region transcription start site region 135208
Tssr131926 15 78336429 to 78336442 13 + TSS region transcription start site region 131926
Tssr131927 15 78337230 to 78337275 45 + TSS region transcription start site region 131927
Tssr131928 15 78341627 to 78341647 20 + TSS region transcription start site region 131928
Tssr131929 15 78342031 to 78342069 38 + TSS region transcription start site region 131929
Tssr131930 15 78344877 to 78344911 34 + TSS region transcription start site region 131930
Tssr131931 15 78345476 to 78345495 19 + TSS region transcription start site region 131931
Tssr131932 15 78348067 to 78348079 12 + TSS region transcription start site region 131932
Tssr131933 15 78348151 to 78348163 12 + TSS region transcription start site region 131933
Tssr131934 15 78348215 to 78348229 14 + TSS region transcription start site region 131934
Tssr131935 15 78348280 to 78348291 11 + TSS region transcription start site region 131935
Mir7676-2 15 78348599 to 78348660 61 + miRNA gene microRNA 7676-2
Tssr131936 15 78348946 to 78348959 13 + TSS region transcription start site region 131936
Tssr131937 15 78348973 to 78348984 11 + TSS region transcription start site region 131937
Tssr131938 15 78349027 to 78349070 43 + TSS region transcription start site region 131938
Tssr131939 15 78349095 to 78349119 24 + TSS region transcription start site region 131939
Tssr131940 15 78349168 to 78349193 25 + TSS region transcription start site region 131940
Tssr131941 15 78349262 to 78349282 20 + TSS region transcription start site region 131941
Tssr131942 15 78349300 to 78349311 11 + TSS region transcription start site region 131942
Gm26329 15 78369248 to 78369357 109 + unclassified non-coding RNA gene predicted gene, 26329
Tex33 15 78378400 to 78395912 17512 - protein coding gene testis expressed 33
Tssr135209 15 78388738 to 78388749 11 - TSS region transcription start site region 135209
Tssr135210 15 78388757 to 78388776 19 - TSS region transcription start site region 135210
Tssr135211 15 78390265 to 78390274 9 - TSS region transcription start site region 135211
Tssr135212 15 78395876 to 78395893 17 - TSS region transcription start site region 135212
Tssr135213 15 78395899 to 78395914 15 - TSS region transcription start site region 135213
Gm49481 15 78396001 to 78397184 1183 + bidirectional promoter lncRNA gene predicted gene, 49481
Tst 15 78399556 to 78405859 6303 - protein coding gene thiosulfate sulfurtransferase, mitochondrial
Tssr135214 15 78405356 to 78405381 25 - TSS region transcription start site region 135214
Cpgi7286 15 78405516 to 78406945 1429 CpG island CpG island 7286
Tssr135215 15 78405824 to 78405917 93 - TSS region transcription start site region 135215
Tssr135216 15 78405985 to 78405993 8 - TSS region transcription start site region 135216
Tssr131943 15 78406183 to 78406187 4 + TSS region transcription start site region 131943
Tssr135217 15 78406410 to 78406416 6 - TSS region transcription start site region 135217
Tssr131944 15 78406695 to 78406732 37 + TSS region transcription start site region 131944
Mpst 15 78406712 to 78414015 7303 + protein coding gene mercaptopyruvate sulfurtransferase
Tssr131945 15 78406777 to 78406796 19 + TSS region transcription start site region 131945
Tssr131946 15 78409713 to 78409728 15 + TSS region transcription start site region 131946
Tssr131947 15 78409739 to 78409748 9 + TSS region transcription start site region 131947
Tssr131948 15 78409760 to 78409776 16 + TSS region transcription start site region 131948
Cpgi7287 15 78409872 to 78410773 901 CpG island CpG island 7287
Tssr131949 15 78409910 to 78409922 12 + TSS region transcription start site region 131949
Tssr131950 15 78409954 to 78410038 84 + TSS region transcription start site region 131950
Tssr131951 15 78410279 to 78410284 5 + TSS region transcription start site region 131951
Gm41355 15 78416889 to 78426230 9341 + lncRNA gene predicted gene, 41355
Gm36644 15 78420496 to 78424193 3697 - lincRNA gene predicted gene, 36644
Cpgi7288 15 78428267 to 78429150 883 CpG island CpG island 7288
Tssr131952 15 78428447 to 78428457 10 + TSS region transcription start site region 131952
Kctd17 15 78428564 to 78439303 10739 + protein coding gene potassium channel tetramerisation domain containing 17
Tssr131953 15 78428625 to 78428636 11 + TSS region transcription start site region 131953
Tssr131954 15 78428650 to 78428671 21 + TSS region transcription start site region 131954
Tssr131955 15 78430117 to 78430127 10 + TSS region transcription start site region 131955
Cpgi7289 15 78436624 to 78437331 707 CpG island CpG island 7289
Tssr131956 15 78437112 to 78437145 33 + TSS region transcription start site region 131956
Tmprss6 15 78439667 to 78468634 28967 - protein coding gene transmembrane serine protease 6