Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78172770-79032787

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388 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
Ift27 15 78159463 to 78174107 14644 - protein coding gene intraflagellar transport 27
Cpgi7283 15 78173604 to 78174586 982 CpG island CpG island 7283
Tssr135172 15 78173827 to 78173840 13 - TSS region transcription start site region 135172
Tssr135173 15 78173926 to 78173947 21 - TSS region transcription start site region 135173
Tssr135174 15 78173956 to 78173988 32 - TSS region transcription start site region 135174
Tssr135175 15 78174026 to 78174089 63 - TSS region transcription start site region 135175
Tssr135176 15 78174090 to 78174109 19 - TSS region transcription start site region 135176
Gm49694 15 78174461 to 78174851 390 + lincRNA gene predicted gene, 49694
Pvalb 15 78191117 to 78206351 15234 - protein coding gene parvalbumin
Tssr135177 15 78191553 to 78191562 9 - TSS region transcription start site region 135177
Tssr135178 15 78191626 to 78191627 1 - TSS region transcription start site region 135178
Tssr135179 15 78191629 to 78191665 36 - TSS region transcription start site region 135179
Tssr135180 15 78191691 to 78191702 11 - TSS region transcription start site region 135180
Tssr135181 15 78200677 to 78200681 4 - TSS region transcription start site region 135181
Tssr135182 15 78201672 to 78201683 11 - TSS region transcription start site region 135182
Cpgi7284 15 78203987 to 78204588 601 CpG island CpG island 7284
Tssr135183 15 78204148 to 78204198 50 - TSS region transcription start site region 135183
Tssr135184 15 78204228 to 78204239 11 - TSS region transcription start site region 135184
Tssr135185 15 78204429 to 78204450 21 - TSS region transcription start site region 135185
Tssr135186 15 78206391 to 78206407 16 - TSS region transcription start site region 135186
Tssr135187 15 78242718 to 78242738 20 - TSS region transcription start site region 135187
Tssr131893 15 78244759 to 78244778 19 + TSS region transcription start site region 131893
Tssr131894 15 78244781 to 78244837 56 + TSS region transcription start site region 131894
Ncf4 15 78244801 to 78262580 17779 + protein coding gene neutrophil cytosolic factor 4
Tssr135188 15 78244839 to 78244850 11 - TSS region transcription start site region 135188
Tssr131895 15 78244853 to 78244866 13 + TSS region transcription start site region 131895
Tssr131896 15 78244948 to 78245006 58 + TSS region transcription start site region 131896
Tssr131897 15 78245020 to 78245051 31 + TSS region transcription start site region 131897
Tssr135189 15 78246241 to 78246270 29 - TSS region transcription start site region 135189
Tssr135190 15 78246273 to 78246299 26 - TSS region transcription start site region 135190
Tssr131898 15 78246408 to 78246440 32 + TSS region transcription start site region 131898
Tssr131899 15 78247438 to 78247456 18 + TSS region transcription start site region 131899
Tssr135191 15 78247721 to 78247763 42 - TSS region transcription start site region 135191
Tssr131900 15 78247931 to 78247953 22 + TSS region transcription start site region 131900
Tssr131901 15 78248059 to 78248073 14 + TSS region transcription start site region 131901
Tssr131902 15 78250615 to 78250629 14 + TSS region transcription start site region 131902
Tssr131903 15 78250888 to 78250902 14 + TSS region transcription start site region 131903
Tssr131904 15 78253221 to 78253233 12 + TSS region transcription start site region 131904
Tssr131905 15 78253272 to 78253303 31 + TSS region transcription start site region 131905
Cpgi7285 15 78254736 to 78255018 282 CpG island CpG island 7285
Tssr131906 15 78254864 to 78254894 30 + TSS region transcription start site region 131906
Tssr131907 15 78260688 to 78260707 19 + TSS region transcription start site region 131907
Tssr131908 15 78260902 to 78260927 25 + TSS region transcription start site region 131908
Tssr131909 15 78261269 to 78261308 39 + TSS region transcription start site region 131909
Tssr131910 15 78261351 to 78261365 14 + TSS region transcription start site region 131910
Tssr131911 15 78261469 to 78261498 29 + TSS region transcription start site region 131911
Csf2rb2 15 78282507 to 78305721 23214 - protein coding gene colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
Tssr135192 15 78283046 to 78283059 13 - TSS region transcription start site region 135192
Tssr135193 15 78284120 to 78284151 31 - TSS region transcription start site region 135193
Tssr135194 15 78284164 to 78284189 25 - TSS region transcription start site region 135194
Tssr135195 15 78284340 to 78284351 11 - TSS region transcription start site region 135195
Tssr135196 15 78284377 to 78284412 35 - TSS region transcription start site region 135196
Mir7676-1 15 78284788 to 78284849 61 - miRNA gene microRNA 7676-1
Tssr135197 15 78285144 to 78285174 30 - TSS region transcription start site region 135197
Tssr135198 15 78285215 to 78285252 37 - TSS region transcription start site region 135198
Tssr135199 15 78287946 to 78287968 22 - TSS region transcription start site region 135199
Tssr135200 15 78291656 to 78291682 26 - TSS region transcription start site region 135200
Tssr135201 15 78297009 to 78297020 11 - TSS region transcription start site region 135201
Tssr135202 15 78298080 to 78298092 12 - TSS region transcription start site region 135202
Tssr135203 15 78298179 to 78298204 25 - TSS region transcription start site region 135203
Tssr135204 15 78305638 to 78305670 32 - TSS region transcription start site region 135204
Tssr135205 15 78305717 to 78305730 13 - TSS region transcription start site region 135205
Tssr135206 15 78314517 to 78314530 13 - TSS region transcription start site region 135206
Tssr131912 15 78317047 to 78317059 12 + TSS region transcription start site region 131912
Tssr131913 15 78325723 to 78325750 27 + TSS region transcription start site region 131913
Csf2rb 15 78325798 to 78351001 25203 + protein coding gene colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
Tssr131914 15 78325816 to 78325837 21 + TSS region transcription start site region 131914
Tssr131915 15 78325841 to 78325862 21 + TSS region transcription start site region 131915
Tssr131916 15 78326005 to 78326025 20 + TSS region transcription start site region 131916
Tssr131917 15 78326044 to 78326059 15 + TSS region transcription start site region 131917
Tssr131918 15 78329709 to 78329754 45 + TSS region transcription start site region 131918
Tssr131919 15 78331718 to 78331739 21 + TSS region transcription start site region 131919
Tssr131920 15 78331864 to 78331893 29 + TSS region transcription start site region 131920
Tssr131921 15 78334048 to 78334063 15 + TSS region transcription start site region 131921
Tssr131922 15 78335143 to 78335163 20 + TSS region transcription start site region 131922
Tssr131923 15 78335230 to 78335283 53 + TSS region transcription start site region 131923
Tssr131924 15 78335284 to 78335302 18 + TSS region transcription start site region 131924
Tssr131925 15 78336341 to 78336348 7 + TSS region transcription start site region 131925
Tssr135207 15 78336384 to 78336406 22 - TSS region transcription start site region 135207
Tssr135208 15 78336416 to 78336428 12 - TSS region transcription start site region 135208
Tssr131926 15 78336429 to 78336442 13 + TSS region transcription start site region 131926
Tssr131927 15 78337230 to 78337275 45 + TSS region transcription start site region 131927
Tssr131928 15 78341627 to 78341647 20 + TSS region transcription start site region 131928
Tssr131929 15 78342031 to 78342069 38 + TSS region transcription start site region 131929
Tssr131930 15 78344877 to 78344911 34 + TSS region transcription start site region 131930
Tssr131931 15 78345476 to 78345495 19 + TSS region transcription start site region 131931
Tssr131932 15 78348067 to 78348079 12 + TSS region transcription start site region 131932
Tssr131933 15 78348151 to 78348163 12 + TSS region transcription start site region 131933
Tssr131934 15 78348215 to 78348229 14 + TSS region transcription start site region 131934
Tssr131935 15 78348280 to 78348291 11 + TSS region transcription start site region 131935
Mir7676-2 15 78348599 to 78348660 61 + miRNA gene microRNA 7676-2
Tssr131936 15 78348946 to 78348959 13 + TSS region transcription start site region 131936
Tssr131937 15 78348973 to 78348984 11 + TSS region transcription start site region 131937
Tssr131938 15 78349027 to 78349070 43 + TSS region transcription start site region 131938
Tssr131939 15 78349095 to 78349119 24 + TSS region transcription start site region 131939
Tssr131940 15 78349168 to 78349193 25 + TSS region transcription start site region 131940
Tssr131941 15 78349262 to 78349282 20 + TSS region transcription start site region 131941
Tssr131942 15 78349300 to 78349311 11 + TSS region transcription start site region 131942
Gm26329 15 78369248 to 78369357 109 + unclassified non-coding RNA gene predicted gene, 26329
Tex33 15 78378400 to 78395912 17512 - protein coding gene testis expressed 33
Tssr135209 15 78388738 to 78388749 11 - TSS region transcription start site region 135209
Tssr135210 15 78388757 to 78388776 19 - TSS region transcription start site region 135210
Tssr135211 15 78390265 to 78390274 9 - TSS region transcription start site region 135211
Tssr135212 15 78395876 to 78395893 17 - TSS region transcription start site region 135212
Tssr135213 15 78395899 to 78395914 15 - TSS region transcription start site region 135213
Gm49481 15 78396001 to 78397184 1183 + bidirectional promoter lncRNA gene predicted gene, 49481
Tst 15 78399556 to 78405859 6303 - protein coding gene thiosulfate sulfurtransferase, mitochondrial
Tssr135214 15 78405356 to 78405381 25 - TSS region transcription start site region 135214
Cpgi7286 15 78405516 to 78406945 1429 CpG island CpG island 7286
Tssr135215 15 78405824 to 78405917 93 - TSS region transcription start site region 135215
Tssr135216 15 78405985 to 78405993 8 - TSS region transcription start site region 135216
Tssr131943 15 78406183 to 78406187 4 + TSS region transcription start site region 131943
Tssr135217 15 78406410 to 78406416 6 - TSS region transcription start site region 135217
Tssr131944 15 78406695 to 78406732 37 + TSS region transcription start site region 131944
Mpst 15 78406712 to 78414015 7303 + protein coding gene mercaptopyruvate sulfurtransferase
Tssr131945 15 78406777 to 78406796 19 + TSS region transcription start site region 131945
Tssr131946 15 78409713 to 78409728 15 + TSS region transcription start site region 131946
Tssr131947 15 78409739 to 78409748 9 + TSS region transcription start site region 131947
Tssr131948 15 78409760 to 78409776 16 + TSS region transcription start site region 131948
Cpgi7287 15 78409872 to 78410773 901 CpG island CpG island 7287
Tssr131949 15 78409910 to 78409922 12 + TSS region transcription start site region 131949
Tssr131950 15 78409954 to 78410038 84 + TSS region transcription start site region 131950
Tssr131951 15 78410279 to 78410284 5 + TSS region transcription start site region 131951
Gm41355 15 78416889 to 78426230 9341 + lncRNA gene predicted gene, 41355
Gm36644 15 78420496 to 78424193 3697 - lincRNA gene predicted gene, 36644
Cpgi7288 15 78428267 to 78429150 883 CpG island CpG island 7288
Tssr131952 15 78428447 to 78428457 10 + TSS region transcription start site region 131952
Kctd17 15 78428564 to 78439303 10739 + protein coding gene potassium channel tetramerisation domain containing 17
Tssr131953 15 78428625 to 78428636 11 + TSS region transcription start site region 131953
Tssr131954 15 78428650 to 78428671 21 + TSS region transcription start site region 131954
Tssr131955 15 78430117 to 78430127 10 + TSS region transcription start site region 131955
Cpgi7289 15 78436624 to 78437331 707 CpG island CpG island 7289
Tssr131956 15 78437112 to 78437145 33 + TSS region transcription start site region 131956
Tmprss6 15 78439667 to 78468634 28967 - protein coding gene transmembrane serine protease 6
Tssr131957 15 78449380 to 78449386 6 + TSS region transcription start site region 131957
Tssr135218 15 78468449 to 78468460 11 - TSS region transcription start site region 135218
Tssr135219 15 78468463 to 78468485 22 - TSS region transcription start site region 135219
Tssr135220 15 78468620 to 78468646 26 - TSS region transcription start site region 135220
Tssr135221 15 78468658 to 78468681 23 - TSS region transcription start site region 135221
Il2rb 15 78479256 to 78495271 16015 - protein coding gene interleukin 2 receptor, beta chain
Tssr135222 15 78481676 to 78481714 38 - TSS region transcription start site region 135222
Tssr135223 15 78493607 to 78493617 10 - TSS region transcription start site region 135223
Tssr135224 15 78493726 to 78493747 21 - TSS region transcription start site region 135224
Tssr131958 15 78493851 to 78493860 9 + TSS region transcription start site region 131958
Tssr131959 15 78493869 to 78493882 13 + TSS region transcription start site region 131959
Tssr135225 15 78494358 to 78494369 11 - TSS region transcription start site region 135225
Tssr135226 15 78494372 to 78494381 9 - TSS region transcription start site region 135226
Tssr135227 15 78495037 to 78495048 11 - TSS region transcription start site region 135227
Tssr135228 15 78495059 to 78495073 14 - TSS region transcription start site region 135228
Tssr135229 15 78495212 to 78495223 11 - TSS region transcription start site region 135229
Tssr135230 15 78495241 to 78495251 10 - TSS region transcription start site region 135230
Tssr135231 15 78511605 to 78511616 11 - TSS region transcription start site region 135231
Tssr135232 15 78512456 to 78512476 20 - TSS region transcription start site region 135232
C1qtnf6 15 78523346 to 78531416 8070 - protein coding gene C1q and tumor necrosis factor related protein 6
Tssr135233 15 78529559 to 78529570 11 - TSS region transcription start site region 135233
Tssr135234 15 78529580 to 78529605 25 - TSS region transcription start site region 135234
Tssr135235 15 78529609 to 78529612 3 - TSS region transcription start site region 135235
Tssr135236 15 78529617 to 78529636 19 - TSS region transcription start site region 135236
Tssr135237 15 78529642 to 78529661 19 - TSS region transcription start site region 135237
Tssr131960 15 78531087 to 78531116 29 + TSS region transcription start site region 131960
Gm49490 15 78531109 to 78532797 1688 + antisense lncRNA gene predicted gene, 49490
Cpgi7290 15 78531990 to 78532459 469 CpG island CpG island 7290
Sstr3 15 78537008 to 78544685 7677 - protein coding gene somatostatin receptor 3
Cpgi7291 15 78539373 to 78540255 882 CpG island CpG island 7291
Cpgi7292 15 78544228 to 78544417 189 CpG island CpG island 7292
Tssr135238 15 78544643 to 78544658 15 - TSS region transcription start site region 135238
Tssr135239 15 78544666 to 78544686 20 - TSS region transcription start site region 135239
Tssr135240 15 78549352 to 78549384 32 - TSS region transcription start site region 135240
Gm6723 15 78554408 to 78554848 440 - pseudogene predicted pseudogene 6723
Cpgi7293 15 78554495 to 78554983 488 CpG island CpG island 7293
Tssr131961 15 78558836 to 78558841 5 + TSS region transcription start site region 131961
Rac2 15 78559169 to 78572783 13614 - protein coding gene Rac family small GTPase 2
Tssr131962 15 78560873 to 78560885 12 + TSS region transcription start site region 131962
Tssr131963 15 78560988 to 78561019 31 + TSS region transcription start site region 131963
Tssr135241 15 78561001 to 78561048 47 - TSS region transcription start site region 135241
Tssr131964 15 78561198 to 78561227 29 + TSS region transcription start site region 131964
Tssr135242 15 78561202 to 78561214 12 - TSS region transcription start site region 135242
Tssr135243 15 78561224 to 78561233 9 - TSS region transcription start site region 135243
Tssr135244 15 78561403 to 78561417 14 - TSS region transcription start site region 135244
Tssr131965 15 78561412 to 78561436 24 + TSS region transcription start site region 131965
Tssr135245 15 78561465 to 78561490 25 - TSS region transcription start site region 135245
Tssr131966 15 78561912 to 78561952 40 + TSS region transcription start site region 131966
Tssr135246 15 78561946 to 78562000 54 - TSS region transcription start site region 135246
Tssr131967 15 78564908 to 78564968 60 + TSS region transcription start site region 131967
Tssr135247 15 78564985 to 78565030 45 - TSS region transcription start site region 135247
Tssr135248 15 78565944 to 78565957 13 - TSS region transcription start site region 135248
Tssr135249 15 78565963 to 78565981 18 - TSS region transcription start site region 135249
Tssr131968 15 78565978 to 78565996 18 + TSS region transcription start site region 131968
Tssr135250 15 78570774 to 78570806 32 - TSS region transcription start site region 135250
Cpgi7294 15 78571723 to 78572033 310 CpG island CpG island 7294
Tssr131969 15 78571798 to 78571811 13 + TSS region transcription start site region 131969
Tssr135251 15 78572668 to 78572675 7 - TSS region transcription start site region 135251
Tssr135252 15 78572686 to 78572690 4 - TSS region transcription start site region 135252
Tssr135253 15 78572709 to 78572750 41 - TSS region transcription start site region 135253
Tssr135254 15 78572754 to 78572790 36 - TSS region transcription start site region 135254