Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:77991328-78201482

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cacng2 15 77991919 to 78119474 127555 - protein coding gene calcium channel, voltage-dependent, gamma subunit 2
Tssr135161 15 77991982 to 77992006 24 - TSS region transcription start site region 135161
Tssr135162 15 77994898 to 77994904 6 - TSS region transcription start site region 135162
Cpgi7280 15 77995060 to 77995766 706 CpG island CpG island 7280
Tssr135163 15 77995069 to 77995085 16 - TSS region transcription start site region 135163
Tssr135164 15 77995090 to 77995107 17 - TSS region transcription start site region 135164
Gm46520 15 78012298 to 78054407 42109 + lncRNA gene predicted gene, 46520
Tssr131890 15 78044111 to 78044118 7 + TSS region transcription start site region 131890
Tssr131891 15 78044136 to 78044147 11 + TSS region transcription start site region 131891
Cpgi7281 15 78096328 to 78096482 154 CpG island CpG island 7281
Cpgi7282 15 78119225 to 78120296 1071 CpG island CpG island 7282
Tssr135165 15 78119580 to 78119624 44 - TSS region transcription start site region 135165
Tssr135166 15 78119629 to 78119652 23 - TSS region transcription start site region 135166
A730060N03Rik 15 78119706 to 78144142 24436 + antisense lncRNA gene RIKEN cDNA A730060N03 gene
Tssr135167 15 78119954 to 78120005 51 - TSS region transcription start site region 135167
Tssr135168 15 78120011 to 78120033 22 - TSS region transcription start site region 135168
Tssr135169 15 78120163 to 78120184 21 - TSS region transcription start site region 135169
Tssr135170 15 78120188 to 78120241 53 - TSS region transcription start site region 135170
D15Let8 15 78149844 to 78149990 146 DNA segment DNA segment, Chr. 15, Verity A. Letts 8
Ift27 15 78159463 to 78174107 14644 - protein coding gene intraflagellar transport 27
Tssr131892 15 78163631 to 78163645 14 + TSS region transcription start site region 131892
D15Let9 15 78167446 to 78167629 183 DNA segment DNA segment, Chr. 15, Verity A. Letts 8
Tssr135171 15 78172415 to 78172459 44 - TSS region transcription start site region 135171
Cpgi7283 15 78173604 to 78174586 982 CpG island CpG island 7283
Tssr135172 15 78173827 to 78173840 13 - TSS region transcription start site region 135172
Tssr135173 15 78173926 to 78173947 21 - TSS region transcription start site region 135173
Tssr135174 15 78173956 to 78173988 32 - TSS region transcription start site region 135174
Tssr135175 15 78174026 to 78174089 63 - TSS region transcription start site region 135175
Tssr135176 15 78174090 to 78174109 19 - TSS region transcription start site region 135176
Gm49694 15 78174461 to 78174851 390 + lincRNA gene predicted gene, 49694
Pvalb 15 78191117 to 78206351 15234 - protein coding gene parvalbumin
Tssr135177 15 78191553 to 78191562 9 - TSS region transcription start site region 135177
Tssr135178 15 78191626 to 78191627 1 - TSS region transcription start site region 135178
Tssr135179 15 78191629 to 78191665 36 - TSS region transcription start site region 135179
Tssr135180 15 78191691 to 78191702 11 - TSS region transcription start site region 135180
Tssr135181 15 78200677 to 78200681 4 - TSS region transcription start site region 135181