Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Epfpq4 | 15 | 75256874 | QTL | epididymal fat percentage QTL 4 | ||
W3q7 | 15 | 75256874 | QTL | weight 3 weeks QTL 7 | ||
Tailaq4 | 15 | 75256874 | QTL | tail length adjusted QTL 4 | ||
Tailq6 | 15 | 75256874 | QTL | tail length QTL 6 | ||
Scfq2 | 15 | 75256874 | QTL | subcutaneous fat pad weight QTL 2 | ||
Myh9 | 15 | 81588 | - | protein coding gene | myosin, heavy polypeptide 9, non-muscle | |
Tssr135127 | 15 | 11 | - | TSS region | transcription start site region 135127 | |
Tssr131876 | 15 | 47 | + | TSS region | transcription start site region 131876 | |
Tssr131877 | 15 | 9 | + | TSS region | transcription start site region 131877 | |
Tssr135128 | 15 | 3 | - | TSS region | transcription start site region 135128 | |
Tssr135129 | 15 | 4 | - | TSS region | transcription start site region 135129 | |
9530001J02Rik | 15 | 1764 | unclassified gene | RIKEN cDNA 9530001J02 gene | ||
Tssr135130 | 15 | 13 | - | TSS region | transcription start site region 135130 | |
Tssr135131 | 15 | 27 | - | TSS region | transcription start site region 135131 | |
Tssr135132 | 15 | 28 | - | TSS region | transcription start site region 135132 | |
Tssr135133 | 15 | 1 | - | TSS region | transcription start site region 135133 | |
Tssr135134 | 15 | 4 | - | TSS region | transcription start site region 135134 | |
Tssr131878 | 15 | 5 | + | TSS region | transcription start site region 131878 | |
Tssr4645 | 15 | 32 | - | TSS region | transcription start site region 4645 | |
Gm22107 | 15 | 99 | - | snRNA gene | predicted gene, 22107 | |
Cpgi7274 | 15 | 1658 | CpG island | CpG island 7274 | ||
Tssr135135 | 15 | 11 | - | TSS region | transcription start site region 135135 | |
Tssr135136 | 15 | 35 | - | TSS region | transcription start site region 135136 | |
Tssr135137 | 15 | 21 | - | TSS region | transcription start site region 135137 | |
Tssr135138 | 15 | 40 | - | TSS region | transcription start site region 135138 | |
Tssr131879 | 15 | 41 | + | TSS region | transcription start site region 131879 | |
Tssr131880 | 15 | 49 | + | TSS region | transcription start site region 131880 | |
Cpgi7275 | 15 | 443 | CpG island | CpG island 7275 | ||
Tssr135139 | 15 | 13 | - | TSS region | transcription start site region 135139 | |
Tssr131881 | 15 | 18 | + | TSS region | transcription start site region 131881 | |
Tssr135140 | 15 | 26 | - | TSS region | transcription start site region 135140 | |
Tssr131882 | 15 | 39 | + | TSS region | transcription start site region 131882 | |
Cpgi7276 | 15 | 315 | CpG island | CpG island 7276 | ||
Tssr135141 | 15 | 17 | - | TSS region | transcription start site region 135141 | |
Tssr131883 | 15 | 42 | + | TSS region | transcription start site region 131883 | |
Tssr131884 | 15 | 13 | + | TSS region | transcription start site region 131884 | |
Tssr131885 | 15 | 7 | + | TSS region | transcription start site region 131885 | |
Tssr131886 | 15 | 11 | + | TSS region | transcription start site region 131886 | |
Txn2 | 15 | 13943 | - | protein coding gene | thioredoxin 2 | |
Tssr135142 | 15 | 45 | - | TSS region | transcription start site region 135142 | |
Tssr135143 | 15 | 18 | - | TSS region | transcription start site region 135143 | |
Tssr135144 | 15 | 19 | - | TSS region | transcription start site region 135144 | |
Tssr135145 | 15 | 22 | - | TSS region | transcription start site region 135145 | |
Tssr135146 | 15 | 18 | - | TSS region | transcription start site region 135146 | |
Tssr135147 | 15 | 32 | - | TSS region | transcription start site region 135147 | |
Cpgi7277 | 15 | 601 | CpG island | CpG island 7277 | ||
Tssr135148 | 15 | 20 | - | TSS region | transcription start site region 135148 | |
Tssr135149 | 15 | 86 | - | TSS region | transcription start site region 135149 | |
Tssr131887 | 15 | 21 | + | TSS region | transcription start site region 131887 | |
Tssr4646 | 15 | 24 | - | TSS region | transcription start site region 4646 | |
Foxred2 | 15 | 16200 | - | protein coding gene | FAD-dependent oxidoreductase domain containing 2 | |
Tssr4647 | 15 | 4 | - | TSS region | transcription start site region 4647 | |
Tssr135150 | 15 | 16 | - | TSS region | transcription start site region 135150 | |
Tssr135151 | 15 | 15 | - | TSS region | transcription start site region 135151 | |
Tssr135152 | 15 | 10 | - | TSS region | transcription start site region 135152 | |
Tssr135153 | 15 | 22 | - | TSS region | transcription start site region 135153 | |
Cpgi7278 | 15 | 1376 | CpG island | CpG island 7278 | ||
Tssr135154 | 15 | 21 | - | TSS region | transcription start site region 135154 | |
Tssr135155 | 15 | 65 | - | TSS region | transcription start site region 135155 | |
Tssr131888 | 15 | 13 | + | TSS region | transcription start site region 131888 | |
Eif3d | 15 | 11815 | - | protein coding gene | eukaryotic translation initiation factor 3, subunit D | |
Gm17638 | 15 | 5452 | + | antisense lncRNA gene | predicted gene, 17638 | |
Tssr131889 | 15 | 23 | + | TSS region | transcription start site region 131889 | |
Tssr135156 | 15 | 7 | - | TSS region | transcription start site region 135156 | |
Tssr135157 | 15 | 6 | - | TSS region | transcription start site region 135157 | |
Cpgi7279 | 15 | 1330 | CpG island | CpG island 7279 | ||
Tssr135158 | 15 | 49 | - | TSS region | transcription start site region 135158 | |
Tssr135159 | 15 | 13 | - | TSS region | transcription start site region 135159 | |
Tssr135160 | 15 | 74 | - | TSS region | transcription start site region 135160 | |
Cacng2 | 15 | 127555 | - | protein coding gene | calcium channel, voltage-dependent, gamma subunit 2 | |
Tssr135161 | 15 | 24 | - | TSS region | transcription start site region 135161 | |
Tssr135162 | 15 | 6 | - | TSS region | transcription start site region 135162 | |
Cpgi7280 | 15 | 706 | CpG island | CpG island 7280 | ||
Tssr135163 | 15 | 16 | - | TSS region | transcription start site region 135163 | |
Tssr135164 | 15 | 17 | - | TSS region | transcription start site region 135164 | |
Gm46520 | 15 | 42109 | + | lncRNA gene | predicted gene, 46520 | |
Tssr131890 | 15 | 7 | + | TSS region | transcription start site region 131890 | |
Tssr131891 | 15 | 11 | + | TSS region | transcription start site region 131891 | |
Cpgi7281 | 15 | 154 | CpG island | CpG island 7281 | ||
Cpgi7282 | 15 | 1071 | CpG island | CpG island 7282 | ||
Tssr135165 | 15 | 44 | - | TSS region | transcription start site region 135165 | |
Tssr135166 | 15 | 23 | - | TSS region | transcription start site region 135166 | |
A730060N03Rik | 15 | 24436 | + | antisense lncRNA gene | RIKEN cDNA A730060N03 gene | |
Tssr135167 | 15 | 51 | - | TSS region | transcription start site region 135167 | |
Tssr135168 | 15 | 22 | - | TSS region | transcription start site region 135168 | |
Tssr135169 | 15 | 21 | - | TSS region | transcription start site region 135169 | |
Tssr135170 | 15 | 53 | - | TSS region | transcription start site region 135170 | |
D15Let8 | 15 | 146 | DNA segment | DNA segment, Chr. 15, Verity A. Letts 8 | ||
Ift27 | 15 | 14644 | - | protein coding gene | intraflagellar transport 27 | |
Tssr131892 | 15 | 14 | + | TSS region | transcription start site region 131892 | |
D15Let9 | 15 | 183 | DNA segment | DNA segment, Chr. 15, Verity A. Letts 8 | ||
Tssr135171 | 15 | 44 | - | TSS region | transcription start site region 135171 | |
Cpgi7283 | 15 | 982 | CpG island | CpG island 7283 | ||
Tssr135172 | 15 | 13 | - | TSS region | transcription start site region 135172 | |
Tssr135173 | 15 | 21 | - | TSS region | transcription start site region 135173 | |
Tssr135174 | 15 | 32 | - | TSS region | transcription start site region 135174 | |
Tssr135175 | 15 | 63 | - | TSS region | transcription start site region 135175 | |
Tssr135176 | 15 | 19 | - | TSS region | transcription start site region 135176 | |
Gm49694 | 15 | 390 | + | lincRNA gene | predicted gene, 49694 | |
Pvalb | 15 | 15234 | - | protein coding gene | parvalbumin | |
Tssr135177 | 15 | 9 | - | TSS region | transcription start site region 135177 | |
Tssr135178 | 15 | 1 | - | TSS region | transcription start site region 135178 | |
Tssr135179 | 15 | 36 | - | TSS region | transcription start site region 135179 | |
Tssr135180 | 15 | 11 | - | TSS region | transcription start site region 135180 | |
Tssr135181 | 15 | 4 | - | TSS region | transcription start site region 135181 | |
Tssr135182 | 15 | 11 | - | TSS region | transcription start site region 135182 | |
Cpgi7284 | 15 | 601 | CpG island | CpG island 7284 | ||
Tssr135183 | 15 | 50 | - | TSS region | transcription start site region 135183 | |
Tssr135184 | 15 | 11 | - | TSS region | transcription start site region 135184 | |
Tssr135185 | 15 | 21 | - | TSS region | transcription start site region 135185 | |
Tssr135186 | 15 | 16 | - | TSS region | transcription start site region 135186 | |
Tssr135187 | 15 | 20 | - | TSS region | transcription start site region 135187 | |
Tssr131893 | 15 | 19 | + | TSS region | transcription start site region 131893 | |
Tssr131894 | 15 | 56 | + | TSS region | transcription start site region 131894 | |
Ncf4 | 15 | 17779 | + | protein coding gene | neutrophil cytosolic factor 4 | |
Tssr135188 | 15 | 11 | - | TSS region | transcription start site region 135188 | |
Tssr131895 | 15 | 13 | + | TSS region | transcription start site region 131895 | |
Tssr131896 | 15 | 58 | + | TSS region | transcription start site region 131896 | |
Tssr131897 | 15 | 31 | + | TSS region | transcription start site region 131897 | |
Tssr135189 | 15 | 29 | - | TSS region | transcription start site region 135189 | |
Tssr135190 | 15 | 26 | - | TSS region | transcription start site region 135190 | |
Tssr131898 | 15 | 32 | + | TSS region | transcription start site region 131898 | |
Tssr131899 | 15 | 18 | + | TSS region | transcription start site region 131899 | |
Tssr135191 | 15 | 42 | - | TSS region | transcription start site region 135191 | |
Tssr131900 | 15 | 22 | + | TSS region | transcription start site region 131900 | |
Tssr131901 | 15 | 14 | + | TSS region | transcription start site region 131901 | |
Tssr131902 | 15 | 14 | + | TSS region | transcription start site region 131902 | |
Tssr131903 | 15 | 14 | + | TSS region | transcription start site region 131903 | |
Tssr131904 | 15 | 12 | + | TSS region | transcription start site region 131904 | |
Tssr131905 | 15 | 31 | + | TSS region | transcription start site region 131905 | |
Cpgi7285 | 15 | 282 | CpG island | CpG island 7285 | ||
Tssr131906 | 15 | 30 | + | TSS region | transcription start site region 131906 | |
Tssr131907 | 15 | 19 | + | TSS region | transcription start site region 131907 | |
Tssr131908 | 15 | 25 | + | TSS region | transcription start site region 131908 | |
Tssr131909 | 15 | 39 | + | TSS region | transcription start site region 131909 | |
Tssr131910 | 15 | 14 | + | TSS region | transcription start site region 131910 | |
Tssr131911 | 15 | 29 | + | TSS region | transcription start site region 131911 | |
Csf2rb2 | 15 | 23214 | - | protein coding gene | colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage) | |
Tssr135192 | 15 | 13 | - | TSS region | transcription start site region 135192 | |
Tssr135193 | 15 | 31 | - | TSS region | transcription start site region 135193 | |
Tssr135194 | 15 | 25 | - | TSS region | transcription start site region 135194 | |
Tssr135195 | 15 | 11 | - | TSS region | transcription start site region 135195 | |
Tssr135196 | 15 | 35 | - | TSS region | transcription start site region 135196 | |
Mir7676-1 | 15 | 61 | - | miRNA gene | microRNA 7676-1 | |
Tssr135197 | 15 | 30 | - | TSS region | transcription start site region 135197 | |
Tssr135198 | 15 | 37 | - | TSS region | transcription start site region 135198 | |
Tssr135199 | 15 | 22 | - | TSS region | transcription start site region 135199 | |
Tssr135200 | 15 | 26 | - | TSS region | transcription start site region 135200 | |
Tssr135201 | 15 | 11 | - | TSS region | transcription start site region 135201 | |
Tssr135202 | 15 | 12 | - | TSS region | transcription start site region 135202 | |
Tssr135203 | 15 | 25 | - | TSS region | transcription start site region 135203 | |
Tssr135204 | 15 | 32 | - | TSS region | transcription start site region 135204 | |
Tssr135205 | 15 | 13 | - | TSS region | transcription start site region 135205 | |
Tssr135206 | 15 | 13 | - | TSS region | transcription start site region 135206 | |
Tssr131912 | 15 | 12 | + | TSS region | transcription start site region 131912 | |
Tssr131913 | 15 | 27 | + | TSS region | transcription start site region 131913 | |
Csf2rb | 15 | 25203 | + | protein coding gene | colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) | |
Tssr131914 | 15 | 21 | + | TSS region | transcription start site region 131914 | |
Tssr131915 | 15 | 21 | + | TSS region | transcription start site region 131915 | |
Tssr131916 | 15 | 20 | + | TSS region | transcription start site region 131916 | |
Tssr131917 | 15 | 15 | + | TSS region | transcription start site region 131917 | |
Tssr131918 | 15 | 45 | + | TSS region | transcription start site region 131918 | |
Tssr131919 | 15 | 21 | + | TSS region | transcription start site region 131919 | |
Tssr131920 | 15 | 29 | + | TSS region | transcription start site region 131920 | |
Tssr131921 | 15 | 15 | + | TSS region | transcription start site region 131921 | |
Tssr131922 | 15 | 20 | + | TSS region | transcription start site region 131922 | |
Tssr131923 | 15 | 53 | + | TSS region | transcription start site region 131923 | |
Tssr131924 | 15 | 18 | + | TSS region | transcription start site region 131924 | |
Tssr131925 | 15 | 7 | + | TSS region | transcription start site region 131925 | |
Tssr135207 | 15 | 22 | - | TSS region | transcription start site region 135207 | |
Tssr135208 | 15 | 12 | - | TSS region | transcription start site region 135208 | |
Tssr131926 | 15 | 13 | + | TSS region | transcription start site region 131926 | |
Tssr131927 | 15 | 45 | + | TSS region | transcription start site region 131927 | |
Tssr131928 | 15 | 20 | + | TSS region | transcription start site region 131928 | |
Tssr131929 | 15 | 38 | + | TSS region | transcription start site region 131929 | |
Tssr131930 | 15 | 34 | + | TSS region | transcription start site region 131930 | |
Tssr131931 | 15 | 19 | + | TSS region | transcription start site region 131931 | |
Tssr131932 | 15 | 12 | + | TSS region | transcription start site region 131932 | |
Tssr131933 | 15 | 12 | + | TSS region | transcription start site region 131933 | |
Tssr131934 | 15 | 14 | + | TSS region | transcription start site region 131934 | |
Tssr131935 | 15 | 11 | + | TSS region | transcription start site region 131935 | |
Mir7676-2 | 15 | 61 | + | miRNA gene | microRNA 7676-2 | |
Tssr131936 | 15 | 13 | + | TSS region | transcription start site region 131936 | |
Tssr131937 | 15 | 11 | + | TSS region | transcription start site region 131937 | |
Tssr131938 | 15 | 43 | + | TSS region | transcription start site region 131938 | |
Tssr131939 | 15 | 24 | + | TSS region | transcription start site region 131939 | |
Tssr131940 | 15 | 25 | + | TSS region | transcription start site region 131940 | |
Tssr131941 | 15 | 20 | + | TSS region | transcription start site region 131941 | |
Tssr131942 | 15 | 11 | + | TSS region | transcription start site region 131942 | |
Gm26329 | 15 | 109 | + | unclassified non-coding RNA gene | predicted gene, 26329 | |
Tex33 | 15 | 17512 | - | protein coding gene | testis expressed 33 | |
Tssr135209 | 15 | 11 | - | TSS region | transcription start site region 135209 | |
Tssr135210 | 15 | 19 | - | TSS region | transcription start site region 135210 | |
Tssr135211 | 15 | 9 | - | TSS region | transcription start site region 135211 | |
Tssr135212 | 15 | 17 | - | TSS region | transcription start site region 135212 | |
Tssr135213 | 15 | 15 | - | TSS region | transcription start site region 135213 | |
Gm49481 | 15 | 1183 | + | bidirectional promoter lncRNA gene | predicted gene, 49481 | |
Tst | 15 | 6303 | - | protein coding gene | thiosulfate sulfurtransferase, mitochondrial | |
Tssr135214 | 15 | 25 | - | TSS region | transcription start site region 135214 | |
Cpgi7286 | 15 | 1429 | CpG island | CpG island 7286 |