Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:77800790-78090800

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myh9 15 77760587 to 77842175 81588 - protein coding gene myosin, heavy polypeptide 9, non-muscle
Tssr131873 15 77800757 to 77800791 34 + TSS region transcription start site region 131873
Tssr131874 15 77800815 to 77800826 11 + TSS region transcription start site region 131874
Tssr131875 15 77805943 to 77805954 11 + TSS region transcription start site region 131875
Tssr135125 15 77813151 to 77813167 16 - TSS region transcription start site region 135125
Tssr135126 15 77813203 to 77813237 34 - TSS region transcription start site region 135126
Tssr135127 15 77815916 to 77815927 11 - TSS region transcription start site region 135127
Tssr131876 15 77816354 to 77816401 47 + TSS region transcription start site region 131876
Tssr131877 15 77822473 to 77822482 9 + TSS region transcription start site region 131877
Tssr135128 15 77829455 to 77829458 3 - TSS region transcription start site region 135128
Tssr135129 15 77829604 to 77829608 4 - TSS region transcription start site region 135129
9530001J02Rik 15 77835088 to 77836852 1764 unclassified gene RIKEN cDNA 9530001J02 gene
Tssr135130 15 77836161 to 77836174 13 - TSS region transcription start site region 135130
Tssr135131 15 77836241 to 77836268 27 - TSS region transcription start site region 135131
Tssr135132 15 77836288 to 77836316 28 - TSS region transcription start site region 135132
Tssr135133 15 77836831 to 77836832 1 - TSS region transcription start site region 135133
Tssr135134 15 77838572 to 77838576 4 - TSS region transcription start site region 135134
Tssr131878 15 77840271 to 77840276 5 + TSS region transcription start site region 131878
Tssr4645 15 77840614 to 77840646 32 - TSS region transcription start site region 4645
Gm22107 15 77840657 to 77840756 99 - snRNA gene predicted gene, 22107
Cpgi7274 15 77841068 to 77842726 1658 CpG island CpG island 7274
Tssr135135 15 77842047 to 77842058 11 - TSS region transcription start site region 135135
Tssr135136 15 77842088 to 77842123 35 - TSS region transcription start site region 135136
Tssr135137 15 77842133 to 77842154 21 - TSS region transcription start site region 135137
Tssr135138 15 77849561 to 77849601 40 - TSS region transcription start site region 135138
Tssr131879 15 77849778 to 77849819 41 + TSS region transcription start site region 131879
Tssr131880 15 77855543 to 77855592 49 + TSS region transcription start site region 131880
Cpgi7275 15 77857663 to 77858106 443 CpG island CpG island 7275
Tssr135139 15 77857752 to 77857765 13 - TSS region transcription start site region 135139
Tssr131881 15 77857922 to 77857940 18 + TSS region transcription start site region 131881
Tssr135140 15 77874941 to 77874967 26 - TSS region transcription start site region 135140
Tssr131882 15 77881969 to 77882008 39 + TSS region transcription start site region 131882
Cpgi7276 15 77905307 to 77905622 315 CpG island CpG island 7276
Tssr135141 15 77905382 to 77905399 17 - TSS region transcription start site region 135141
Tssr131883 15 77905554 to 77905596 42 + TSS region transcription start site region 131883
Tssr131884 15 77905621 to 77905634 13 + TSS region transcription start site region 131884
Tssr131885 15 77906034 to 77906041 7 + TSS region transcription start site region 131885
Tssr131886 15 77911330 to 77911341 11 + TSS region transcription start site region 131886
Txn2 15 77915051 to 77928994 13943 - protein coding gene thioredoxin 2
Tssr135142 15 77915368 to 77915413 45 - TSS region transcription start site region 135142
Tssr135143 15 77915436 to 77915454 18 - TSS region transcription start site region 135143
Tssr135144 15 77915632 to 77915651 19 - TSS region transcription start site region 135144
Tssr135145 15 77915675 to 77915697 22 - TSS region transcription start site region 135145
Tssr135146 15 77915721 to 77915739 18 - TSS region transcription start site region 135146
Tssr135147 15 77927863 to 77927895 32 - TSS region transcription start site region 135147
Cpgi7277 15 77928611 to 77929212 601 CpG island CpG island 7277
Tssr135148 15 77928697 to 77928717 20 - TSS region transcription start site region 135148
Tssr135149 15 77928925 to 77929011 86 - TSS region transcription start site region 135149
Tssr131887 15 77929229 to 77929250 21 + TSS region transcription start site region 131887
Tssr4646 15 77933618 to 77933642 24 - TSS region transcription start site region 4646
Foxred2 15 77940522 to 77956722 16200 - protein coding gene FAD-dependent oxidoreductase domain containing 2
Tssr4647 15 77942122 to 77942126 4 - TSS region transcription start site region 4647
Tssr135150 15 77945717 to 77945733 16 - TSS region transcription start site region 135150
Tssr135151 15 77945765 to 77945780 15 - TSS region transcription start site region 135151
Tssr135152 15 77945790 to 77945800 10 - TSS region transcription start site region 135152
Tssr135153 15 77945872 to 77945894 22 - TSS region transcription start site region 135153
Cpgi7278 15 77955573 to 77956949 1376 CpG island CpG island 7278
Tssr135154 15 77956448 to 77956469 21 - TSS region transcription start site region 135154
Tssr135155 15 77956658 to 77956723 65 - TSS region transcription start site region 135155
Tssr131888 15 77956795 to 77956808 13 + TSS region transcription start site region 131888
Eif3d 15 77958998 to 77970813 11815 - protein coding gene eukaryotic translation initiation factor 3, subunit D
Gm17638 15 77961674 to 77967126 5452 + antisense lncRNA gene predicted gene, 17638
Tssr131889 15 77966673 to 77966696 23 + TSS region transcription start site region 131889
Tssr135156 15 77967592 to 77967599 7 - TSS region transcription start site region 135156
Tssr135157 15 77969768 to 77969774 6 - TSS region transcription start site region 135157
Cpgi7279 15 77970149 to 77971479 1330 CpG island CpG island 7279
Tssr135158 15 77970512 to 77970561 49 - TSS region transcription start site region 135158
Tssr135159 15 77970730 to 77970743 13 - TSS region transcription start site region 135159
Tssr135160 15 77970750 to 77970824 74 - TSS region transcription start site region 135160
Cacng2 15 77991919 to 78119474 127555 - protein coding gene calcium channel, voltage-dependent, gamma subunit 2
Tssr135161 15 77991982 to 77992006 24 - TSS region transcription start site region 135161
Tssr135162 15 77994898 to 77994904 6 - TSS region transcription start site region 135162
Cpgi7280 15 77995060 to 77995766 706 CpG island CpG island 7280
Tssr135163 15 77995069 to 77995085 16 - TSS region transcription start site region 135163
Tssr135164 15 77995090 to 77995107 17 - TSS region transcription start site region 135164
Gm46520 15 78012298 to 78054407 42109 + lncRNA gene predicted gene, 46520
Tssr131890 15 78044111 to 78044118 7 + TSS region transcription start site region 131890
Tssr131891 15 78044136 to 78044147 11 + TSS region transcription start site region 131891