Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:77342044-77612048

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7270 15 77343043 to 77343375 332 CpG island CpG island 7270
Tssr131861 15 77356456 to 77356500 44 + TSS region transcription start site region 131861
Tssr131862 15 77357097 to 77357100 3 + TSS region transcription start site region 131862
Tssr131863 15 77357952 to 77357954 2 + TSS region transcription start site region 131863
Cpgi7271 15 77358489 to 77358970 481 CpG island CpG island 7271
Gm49436 15 77365898 to 77366699 801 - unclassified gene predicted gene, 49436
Tssr135097 15 77367140 to 77367150 10 - TSS region transcription start site region 135097
Cpgi7272 15 77368239 to 77368483 244 CpG island CpG island 7272
Gm3787 15 77369494 to 77371010 1516 - lncRNA gene predicted gene 3787
Tssr131864 15 77370827 to 77370832 5 + TSS region transcription start site region 131864
Gm41354 15 77371212 to 77373878 2666 + lncRNA gene predicted gene, 41354
Tssr135098 15 77376910 to 77376919 9 - TSS region transcription start site region 135098
Gm41353 15 77377860 to 77379351 1491 + lncRNA gene predicted gene, 41353
Apol7a 15 77388219 to 77399110 10891 - protein coding gene apolipoprotein L 7a
Gm20688 15 77391702 to 77392381 679 - sense intronic lncRNA gene predicted gene 20688
Tssr135099 15 77399211 to 77399235 24 - TSS region transcription start site region 135099
Apol9a 15 77403789 to 77411080 7291 - protein coding gene apolipoprotein L 9a
Gm36194 15 77418553 to 77423599 5046 + lncRNA gene predicted gene, 36194
Apol7b 15 77422209 to 77447460 25251 - protein coding gene apolipoprotein L 7b
4930571N24Rik 15 77427979 to 77461968 33989 + unclassified gene RIKEN cDNA 4930571N24 gene
Gm6506 15 77443289 to 77444420 1131 - pseudogene predicted gene 6506
Gm8208 15 77444674 to 77445219 545 - pseudogene predicted gene 8208
Gm49551 15 77468202 to 77468459 257 + pseudogene predicted gene, 49551
Tssr131865 15 77477044 to 77477048 4 + TSS region transcription start site region 131865
Apol10a 15 77477047 to 77491069 14022 + protein coding gene apolipoprotein L 10A
Apol11a 15 77508129 to 77517874 9745 + protein coding gene apolipoprotein L 11a
Tssr131866 15 77508268 to 77508270 2 + TSS region transcription start site region 131866
Apol7c 15 77524852 to 77533316 8464 - protein coding gene apolipoprotein L 7c
Tssr135100 15 77533312 to 77533317 5 - TSS region transcription start site region 135100
1700025B11Rik 15 77558239 to 77561892 3653 - protein coding gene RIKEN cDNA 1700025B11 gene
Tssr135101 15 77561857 to 77561887 30 - TSS region transcription start site region 135101
Apol10b 15 77583819 to 77596125 12306 - protein coding gene apolipoprotein L 10B
Tssr135102 15 77584900 to 77584905 5 - TSS region transcription start site region 135102
Tssr135103 15 77596110 to 77596131 21 - TSS region transcription start site region 135103
Gm36245 15 77599258 to 77602854 3596 + lncRNA gene predicted gene, 36245