Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:76896949-77146971

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dpml 15 51141298 to 76910293 25768995 QTL dopamine loss
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
Gm49527 15 76879320 to 76901283 21963 + protein coding gene predicted gene, 49527
Cpgi7260 15 76899658 to 76900046 388 CpG island CpG island 7260
Tssr131830 15 76899908 to 76899960 52 + TSS region transcription start site region 131830
Commd5 15 76899941 to 76901297 1356 + protein coding gene COMM domain containing 5
Tssr131831 15 76899962 to 76899973 11 + TSS region transcription start site region 131831
Cpgi7261 15 76900566 to 76901131 565 CpG island CpG island 7261
Cpgi7262 15 76903889 to 76905071 1182 CpG island CpG island 7262
Tssr131832 15 76904070 to 76904092 22 + TSS region transcription start site region 131832
Rpl8 15 76904078 to 76906314 2236 + protein coding gene ribosomal protein L8
Tssr131833 15 76904288 to 76904306 18 + TSS region transcription start site region 131833
Tssr131834 15 76904342 to 76904361 19 + TSS region transcription start site region 131834
Tssr131835 15 76904367 to 76904410 43 + TSS region transcription start site region 131835
Tssr131836 15 76904535 to 76904573 38 + TSS region transcription start site region 131836
Tssr131837 15 76904634 to 76904648 14 + TSS region transcription start site region 131837
Tssr131838 15 76904860 to 76904871 11 + TSS region transcription start site region 131838
Tssr131839 15 76904884 to 76904914 30 + TSS region transcription start site region 131839
Tssr131840 15 76904926 to 76904936 10 + TSS region transcription start site region 131840
Tssr135060 15 76904957 to 76905004 47 - TSS region transcription start site region 135060
Tssr131841 15 76904993 to 76905004 11 + TSS region transcription start site region 131841
Tssr131842 15 76905866 to 76905880 14 + TSS region transcription start site region 131842
Tssr135061 15 76906304 to 76906315 11 - TSS region transcription start site region 135061
D15Mit68 15 76910182 to 76910293 111 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 68
Zfp647 15 76910371 to 76925448 15077 - protein coding gene zinc finger protein 647
Cpgi7263 15 76910778 to 76912108 1330 CpG island CpG island 7263
Cpgi7264 15 76925014 to 76925878 864 CpG island CpG island 7264
Tssr135062 15 76925391 to 76925405 14 - TSS region transcription start site region 135062
Tssr135063 15 76925406 to 76925437 31 - TSS region transcription start site region 135063
Gm18283 15 76933765 to 76934648 883 - pseudogene predicted gene, 18283
Cpgi7265 15 76934143 to 76934398 255 CpG island CpG island 7265
Gm46531 15 76934993 to 76942073 7080 - pseudogene predicted gene, 46531
Gm46534 15 76942143 to 76948349 6206 - lncRNA gene predicted gene, 46534
Cpgi7266 15 76948013 to 76949126 1113 CpG island CpG island 7266
Tssr131843 15 76948225 to 76948314 89 + TSS region transcription start site region 131843
1110038F14Rik 15 76948266 to 76950734 2468 + protein coding gene RIKEN cDNA 1110038F14 gene
Tssr131844 15 76948490 to 76948539 49 + TSS region transcription start site region 131844
Tssr131845 15 76948728 to 76948778 50 + TSS region transcription start site region 131845
Tssr131846 15 76948780 to 76948791 11 + TSS region transcription start site region 131846
Tssr131847 15 76949508 to 76949543 35 + TSS region transcription start site region 131847
Tssr131848 15 76949544 to 76949555 11 + TSS region transcription start site region 131848
Tssr131849 15 76949557 to 76949568 11 + TSS region transcription start site region 131849
Tssr131850 15 76949574 to 76949584 10 + TSS region transcription start site region 131850
Tssr131851 15 76950167 to 76950174 7 + TSS region transcription start site region 131851
Tssr131852 15 76974615 to 76974631 16 + TSS region transcription start site region 131852
Cpgi7267 15 76987465 to 76987858 393 CpG island CpG island 7267
Gm35933 15 76988024 to 76997054 9030 + lincRNA gene predicted gene, 35933
Gm49540 15 77014093 to 77015898 1805 + antisense lncRNA gene predicted gene, 49540
Mb 15 77015487 to 77050668 35181 - protein coding gene myoglobin
Tssr131853 15 77015778 to 77015787 9 + TSS region transcription start site region 131853
Tssr131854 15 77015813 to 77015838 25 + TSS region transcription start site region 131854
Tssr131855 15 77015921 to 77015956 35 + TSS region transcription start site region 131855
Tssr131856 15 77016012 to 77016036 24 + TSS region transcription start site region 131856
Tssr135064 15 77016059 to 77016078 19 - TSS region transcription start site region 135064
Tssr131857 15 77017631 to 77017657 26 + TSS region transcription start site region 131857
Tssr135065 15 77017644 to 77017655 11 - TSS region transcription start site region 135065
Tssr131858 15 77017707 to 77017732 25 + TSS region transcription start site region 131858
Tssr135066 15 77021949 to 77021971 22 - TSS region transcription start site region 135066
Tssr135067 15 77022429 to 77022469 40 - TSS region transcription start site region 135067
Tssr135068 15 77022632 to 77022648 16 - TSS region transcription start site region 135068
D0Nds1 15 77023053 to 77023216 163 DNA segment DNA segment, Nuffield Department of Surgery 1
D15Mit236 15 77044466 to 77044582 116 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 236
Apol6 15 77045043 to 77057108 12065 + protein coding gene apolipoprotein L 6
Tssr131859 15 77045103 to 77045139 36 + TSS region transcription start site region 131859
Tssr135069 15 77058551 to 77058563 12 - TSS region transcription start site region 135069
Gm24753 15 77067791 to 77067897 106 + snRNA gene predicted gene, 24753
Rbfox2 15 77078990 to 77307004 228014 - protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 2
Tssr131860 15 77084367 to 77084411 44 + TSS region transcription start site region 131860
1700109K24Rik 15 77084398 to 77096314 11916 + antisense lncRNA gene RIKEN cDNA 1700109K24 gene
3010033E01Rik 15 77087531 to 77087727 196 unclassified gene RIKEN cDNA 3010033E01 gene
4833412C15Rik 15 77113732 to 77115802 2070 - unclassified gene RIKEN cDNA 4833412C15 gene
Tssr135070 15 77134928 to 77134931 3 - TSS region transcription start site region 135070