Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:76756579-82336588

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1548 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
Dpml 15 51141298 to 76910293 25768995 QTL dopamine loss
Msq1 15 63517797 to 81202235 17684438 QTL MAV-1 susceptibility QTL 1
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
Cocia2 15 72500610 to 80014977 7514367 QTL cocaine induced activation 2
Arhgap39 15 76723985 to 76818170 94185 - protein coding gene Rho GTPase activating protein 39
Gm17271 15 76797696 to 76798050 354 + pseudogene predicted gene, 17271
Tssr135055 15 76805087 to 76805091 4 - TSS region transcription start site region 135055
Cpgi7256 15 76816945 to 76818517 1572 CpG island CpG island 7256
Tssr135056 15 76817022 to 76817033 11 - TSS region transcription start site region 135056
Tssr135057 15 76818093 to 76818174 81 - TSS region transcription start site region 135057
Gm41350 15 76818256 to 76820941 2685 + lncRNA gene predicted gene, 41350
Tssr131826 15 76818280 to 76818294 14 + TSS region transcription start site region 131826
Zfp251 15 76852131 to 76871435 19304 - protein coding gene zinc finger protein 251
Cpgi7257 15 76853348 to 76853820 472 CpG island CpG island 7257
Cpgi7258 15 76870446 to 76871715 1269 CpG island CpG island 7258
Tssr131827 15 76870942 to 76870958 16 + TSS region transcription start site region 131827
Tssr135058 15 76871065 to 76871105 40 - TSS region transcription start site region 135058
Tssr135059 15 76871400 to 76871453 53 - TSS region transcription start site region 135059
Cpgi7259 15 76879086 to 76879578 492 CpG island CpG island 7259
Tssr131828 15 76879232 to 76879246 14 + TSS region transcription start site region 131828
Zfp7 15 76879259 to 76892395 13136 + protein coding gene zinc finger protein 7
Tssr131829 15 76879302 to 76879334 32 + TSS region transcription start site region 131829
Gm49527 15 76879320 to 76901283 21963 + protein coding gene predicted gene, 49527
Cpgi7260 15 76899658 to 76900046 388 CpG island CpG island 7260
Tssr131830 15 76899908 to 76899960 52 + TSS region transcription start site region 131830
Commd5 15 76899941 to 76901297 1356 + protein coding gene COMM domain containing 5
Tssr131831 15 76899962 to 76899973 11 + TSS region transcription start site region 131831
Cpgi7261 15 76900566 to 76901131 565 CpG island CpG island 7261
Cpgi7262 15 76903889 to 76905071 1182 CpG island CpG island 7262
Tssr131832 15 76904070 to 76904092 22 + TSS region transcription start site region 131832
Rpl8 15 76904078 to 76906314 2236 + protein coding gene ribosomal protein L8
Tssr131833 15 76904288 to 76904306 18 + TSS region transcription start site region 131833
Tssr131834 15 76904342 to 76904361 19 + TSS region transcription start site region 131834
Tssr131835 15 76904367 to 76904410 43 + TSS region transcription start site region 131835
Tssr131836 15 76904535 to 76904573 38 + TSS region transcription start site region 131836
Tssr131837 15 76904634 to 76904648 14 + TSS region transcription start site region 131837
Tssr131838 15 76904860 to 76904871 11 + TSS region transcription start site region 131838
Tssr131839 15 76904884 to 76904914 30 + TSS region transcription start site region 131839
Tssr131840 15 76904926 to 76904936 10 + TSS region transcription start site region 131840
Tssr135060 15 76904957 to 76905004 47 - TSS region transcription start site region 135060
Tssr131841 15 76904993 to 76905004 11 + TSS region transcription start site region 131841
Tssr131842 15 76905866 to 76905880 14 + TSS region transcription start site region 131842
Tssr135061 15 76906304 to 76906315 11 - TSS region transcription start site region 135061
D15Mit68 15 76910182 to 76910293 111 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 68
Zfp647 15 76910371 to 76925448 15077 - protein coding gene zinc finger protein 647
Cpgi7263 15 76910778 to 76912108 1330 CpG island CpG island 7263
Cpgi7264 15 76925014 to 76925878 864 CpG island CpG island 7264
Tssr135062 15 76925391 to 76925405 14 - TSS region transcription start site region 135062
Tssr135063 15 76925406 to 76925437 31 - TSS region transcription start site region 135063
Gm18283 15 76933765 to 76934648 883 - pseudogene predicted gene, 18283
Cpgi7265 15 76934143 to 76934398 255 CpG island CpG island 7265
Gm46531 15 76934993 to 76942073 7080 - pseudogene predicted gene, 46531
Gm46534 15 76942143 to 76948349 6206 - lncRNA gene predicted gene, 46534
Cpgi7266 15 76948013 to 76949126 1113 CpG island CpG island 7266
Tssr131843 15 76948225 to 76948314 89 + TSS region transcription start site region 131843
1110038F14Rik 15 76948266 to 76950734 2468 + protein coding gene RIKEN cDNA 1110038F14 gene
Tssr131844 15 76948490 to 76948539 49 + TSS region transcription start site region 131844
Tssr131845 15 76948728 to 76948778 50 + TSS region transcription start site region 131845
Tssr131846 15 76948780 to 76948791 11 + TSS region transcription start site region 131846
Tssr131847 15 76949508 to 76949543 35 + TSS region transcription start site region 131847
Tssr131848 15 76949544 to 76949555 11 + TSS region transcription start site region 131848
Tssr131849 15 76949557 to 76949568 11 + TSS region transcription start site region 131849
Tssr131850 15 76949574 to 76949584 10 + TSS region transcription start site region 131850
Tssr131851 15 76950167 to 76950174 7 + TSS region transcription start site region 131851
Tssr131852 15 76974615 to 76974631 16 + TSS region transcription start site region 131852
Cpgi7267 15 76987465 to 76987858 393 CpG island CpG island 7267
Gm35933 15 76988024 to 76997054 9030 + lincRNA gene predicted gene, 35933
Gm49540 15 77014093 to 77015898 1805 + antisense lncRNA gene predicted gene, 49540
Mb 15 77015487 to 77050668 35181 - protein coding gene myoglobin
Tssr131853 15 77015778 to 77015787 9 + TSS region transcription start site region 131853
Tssr131854 15 77015813 to 77015838 25 + TSS region transcription start site region 131854
Tssr131855 15 77015921 to 77015956 35 + TSS region transcription start site region 131855
Tssr131856 15 77016012 to 77016036 24 + TSS region transcription start site region 131856
Tssr135064 15 77016059 to 77016078 19 - TSS region transcription start site region 135064
Tssr131857 15 77017631 to 77017657 26 + TSS region transcription start site region 131857
Tssr135065 15 77017644 to 77017655 11 - TSS region transcription start site region 135065
Tssr131858 15 77017707 to 77017732 25 + TSS region transcription start site region 131858
Tssr135066 15 77021949 to 77021971 22 - TSS region transcription start site region 135066
Tssr135067 15 77022429 to 77022469 40 - TSS region transcription start site region 135067
Tssr135068 15 77022632 to 77022648 16 - TSS region transcription start site region 135068
D0Nds1 15 77023053 to 77023216 163 DNA segment DNA segment, Nuffield Department of Surgery 1
D15Mit236 15 77044466 to 77044582 116 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 236
Apol6 15 77045043 to 77057108 12065 + protein coding gene apolipoprotein L 6
Tssr131859 15 77045103 to 77045139 36 + TSS region transcription start site region 131859
Tssr135069 15 77058551 to 77058563 12 - TSS region transcription start site region 135069
Gm24753 15 77067791 to 77067897 106 + snRNA gene predicted gene, 24753
Rbfox2 15 77078990 to 77307004 228014 - protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 2
Tssr131860 15 77084367 to 77084411 44 + TSS region transcription start site region 131860
1700109K24Rik 15 77084398 to 77096314 11916 + antisense lncRNA gene RIKEN cDNA 1700109K24 gene
3010033E01Rik 15 77087531 to 77087727 196 unclassified gene RIKEN cDNA 3010033E01 gene
4833412C15Rik 15 77113732 to 77115802 2070 - unclassified gene RIKEN cDNA 4833412C15 gene
Tssr135070 15 77134928 to 77134931 3 - TSS region transcription start site region 135070
Tssr135071 15 77153602 to 77153611 9 - TSS region transcription start site region 135071
Tssr135072 15 77153639 to 77153648 9 - TSS region transcription start site region 135072
Tssr135073 15 77153673 to 77153674 1 - TSS region transcription start site region 135073
Tssr135074 15 77153696 to 77153724 28 - TSS region transcription start site region 135074
Tssr135075 15 77153726 to 77153750 24 - TSS region transcription start site region 135075
Tssr135076 15 77153772 to 77153817 45 - TSS region transcription start site region 135076
Tssr135077 15 77153905 to 77153963 58 - TSS region transcription start site region 135077
Tssr135078 15 77162907 to 77162915 8 - TSS region transcription start site region 135078
Tssr135079 15 77162974 to 77162985 11 - TSS region transcription start site region 135079
Tssr135080 15 77163070 to 77163086 16 - TSS region transcription start site region 135080
Tssr135081 15 77163095 to 77163114 19 - TSS region transcription start site region 135081
Tssr135082 15 77163116 to 77163177 61 - TSS region transcription start site region 135082
Tssr135083 15 77163336 to 77163339 3 - TSS region transcription start site region 135083
Gm49411 15 77175789 to 77178264 2475 - unclassified gene predicted gene, 49411
Tssr135084 15 77203286 to 77203304 18 - TSS region transcription start site region 135084
Tssr135085 15 77203575 to 77203583 8 - TSS region transcription start site region 135085
Tssr135086 15 77203763 to 77203776 13 - TSS region transcription start site region 135086
Gm24056 15 77242406 to 77242551 145 - snRNA gene predicted gene, 24056
Tssr135087 15 77245516 to 77245562 46 - TSS region transcription start site region 135087
Tssr135088 15 77245593 to 77245604 11 - TSS region transcription start site region 135088
Tssr135089 15 77257668 to 77257672 4 - TSS region transcription start site region 135089
D15Mit146 15 77257787 to 77257911 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 146
Cpgi7268 15 77305930 to 77307468 1538 CpG island CpG island 7268
Tssr135090 15 77306573 to 77306607 34 - TSS region transcription start site region 135090
Tssr135091 15 77306612 to 77306651 39 - TSS region transcription start site region 135091
Tssr135092 15 77306879 to 77306927 48 - TSS region transcription start site region 135092
Tssr135093 15 77306962 to 77306969 7 - TSS region transcription start site region 135093
Tssr135094 15 77307005 to 77307032 27 - TSS region transcription start site region 135094
Tssr135095 15 77307043 to 77307058 15 - TSS region transcription start site region 135095
Tssr135096 15 77307067 to 77307103 36 - TSS region transcription start site region 135096
Gm41352 15 77313609 to 77324452 10843 + lncRNA gene predicted gene, 41352
Cpgi7269 15 77336498 to 77336911 413 CpG island CpG island 7269
Cpgi7270 15 77343043 to 77343375 332 CpG island CpG island 7270
Tssr131861 15 77356456 to 77356500 44 + TSS region transcription start site region 131861
Tssr131862 15 77357097 to 77357100 3 + TSS region transcription start site region 131862
Tssr131863 15 77357952 to 77357954 2 + TSS region transcription start site region 131863
Cpgi7271 15 77358489 to 77358970 481 CpG island CpG island 7271
Gm49436 15 77365898 to 77366699 801 - unclassified gene predicted gene, 49436
Tssr135097 15 77367140 to 77367150 10 - TSS region transcription start site region 135097
Cpgi7272 15 77368239 to 77368483 244 CpG island CpG island 7272
Gm3787 15 77369494 to 77371010 1516 - lncRNA gene predicted gene 3787
Tssr131864 15 77370827 to 77370832 5 + TSS region transcription start site region 131864
Gm41354 15 77371212 to 77373878 2666 + lncRNA gene predicted gene, 41354
Tssr135098 15 77376910 to 77376919 9 - TSS region transcription start site region 135098
Gm41353 15 77377860 to 77379351 1491 + lncRNA gene predicted gene, 41353
Apol7a 15 77388219 to 77399110 10891 - protein coding gene apolipoprotein L 7a
Gm20688 15 77391702 to 77392381 679 - sense intronic lncRNA gene predicted gene 20688
Tssr135099 15 77399211 to 77399235 24 - TSS region transcription start site region 135099
Apol9a 15 77403789 to 77411080 7291 - protein coding gene apolipoprotein L 9a
Gm36194 15 77418553 to 77423599 5046 + lncRNA gene predicted gene, 36194
Apol7b 15 77422209 to 77447460 25251 - protein coding gene apolipoprotein L 7b
4930571N24Rik 15 77427979 to 77461968 33989 + unclassified gene RIKEN cDNA 4930571N24 gene
Gm6506 15 77443289 to 77444420 1131 - pseudogene predicted gene 6506
Gm8208 15 77444674 to 77445219 545 - pseudogene predicted gene 8208
Gm49551 15 77468202 to 77468459 257 + pseudogene predicted gene, 49551
Tssr131865 15 77477044 to 77477048 4 + TSS region transcription start site region 131865
Apol10a 15 77477047 to 77491069 14022 + protein coding gene apolipoprotein L 10A
Apol11a 15 77508129 to 77517874 9745 + protein coding gene apolipoprotein L 11a
Tssr131866 15 77508268 to 77508270 2 + TSS region transcription start site region 131866
Apol7c 15 77524852 to 77533316 8464 - protein coding gene apolipoprotein L 7c
Tssr135100 15 77533312 to 77533317 5 - TSS region transcription start site region 135100
1700025B11Rik 15 77558239 to 77561892 3653 - protein coding gene RIKEN cDNA 1700025B11 gene
Tssr135101 15 77561857 to 77561887 30 - TSS region transcription start site region 135101
Apol10b 15 77583819 to 77596125 12306 - protein coding gene apolipoprotein L 10B
Tssr135102 15 77584900 to 77584905 5 - TSS region transcription start site region 135102
Tssr135103 15 77596110 to 77596131 21 - TSS region transcription start site region 135103
Gm36245 15 77599258 to 77602854 3596 + lncRNA gene predicted gene, 36245
Tssr131867 15 77618965 to 77618970 5 + TSS region transcription start site region 131867
Gm8221 15 77621834 to 77626637 4803 + pseudogene predicted gene 8221
Apol11b 15 77633951 to 77643286 9335 - protein coding gene apolipoprotein L 11b
Apol10c-ps 15 77656048 to 77656836 788 - pseudogene apolipoprotein L 10C, pseudogene
Tssr135104 15 77659844 to 77659849 5 - TSS region transcription start site region 135104
Gm49407 15 77668493 to 77668736 243 - pseudogene predicted gene, 49407
Apol7e 15 77698857 to 77719285 20428 + protein coding gene apolipoprotein L 7e
Tssr131868 15 77698904 to 77698910 6 + TSS region transcription start site region 131868
Gm8233 15 77701124 to 77701675 551 + pseudogene predicted gene 8233
Gm18911 15 77702003 to 77703000 997 + pseudogene predicted gene, 18911
Gm36329 15 77717897 to 77723009 5112 - antisense lncRNA gene predicted gene, 36329
Apol9b 15 77729072 to 77736382 7310 + protein coding gene apolipoprotein L 9b
Tssr131869 15 77729091 to 77729096 5 + TSS region transcription start site region 131869
Tssr131870 15 77729152 to 77729172 20 + TSS region transcription start site region 131870
Tssr131871 15 77733610 to 77733654 44 + TSS region transcription start site region 131871
Tssr4644 15 77740751 to 77740769 18 + TSS region transcription start site region 4644
Gm49410 15 77740761 to 77743890 3129 + unclassified gene predicted gene, 49410
Apol8 15 77747798 to 77757003 9205 - protein coding gene apolipoprotein L 8
Tssr135105 15 77755218 to 77755265 47 - TSS region transcription start site region 135105
Tssr135106 15 77755266 to 77755281 15 - TSS region transcription start site region 135106
Myh9 15 77760587 to 77842175 81588 - protein coding gene myosin, heavy polypeptide 9, non-muscle
Tssr135107 15 77760786 to 77760802 16 - TSS region transcription start site region 135107
Tssr135108 15 77760867 to 77760950 83 - TSS region transcription start site region 135108
Tssr135109 15 77760951 to 77760963 12 - TSS region transcription start site region 135109
Tssr135110 15 77760990 to 77761013 23 - TSS region transcription start site region 135110
Tssr135111 15 77761078 to 77761111 33 - TSS region transcription start site region 135111
Tssr135112 15 77761767 to 77761783 16 - TSS region transcription start site region 135112
Tssr135113 15 77763831 to 77763843 12 - TSS region transcription start site region 135113
Cpgi7273 15 77764329 to 77764638 309 CpG island CpG island 7273
Tssr135114 15 77765766 to 77765780 14 - TSS region transcription start site region 135114
Tssr135115 15 77766829 to 77766861 32 - TSS region transcription start site region 135115
Tssr135116 15 77767567 to 77767593 26 - TSS region transcription start site region 135116
Tssr135117 15 77767643 to 77767656 13 - TSS region transcription start site region 135117
Tssr135118 15 77769873 to 77769892 19 - TSS region transcription start site region 135118
Tssr135119 15 77771174 to 77771191 17 - TSS region transcription start site region 135119
Tssr135120 15 77771210 to 77771227 17 - TSS region transcription start site region 135120