Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:76540912-76690960

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc52a2 15 76538832 to 76544608 5776 + protein coding gene solute carrier protein 52, member 2
Gm35739 15 76557435 to 76559860 2425 + lncRNA gene predicted gene, 35739
Cpgi7240 15 76576173 to 76576753 580 CpG island CpG island 7240
Gm10869 15 76576181 to 76576892 711 protein coding gene predicted gene 10869
Tssr131803 15 76576352 to 76576380 28 + TSS region transcription start site region 131803
Adck5 15 76576359 to 76595812 19453 + protein coding gene aarF domain containing kinase 5
Tssr131804 15 76576386 to 76576457 71 + TSS region transcription start site region 131804
Tssr135014 15 76576748 to 76576752 4 - TSS region transcription start site region 135014
Tssr135015 15 76576807 to 76576814 7 - TSS region transcription start site region 135015
Gm49413 15 76577825 to 76580863 3038 + unclassified gene predicted gene, 49413
Tssr135016 15 76583969 to 76583978 9 - TSS region transcription start site region 135016
5730521K06Rik 15 76590120 to 76591727 1607 + unclassified gene RIKEN cDNA 5730521K06 gene
Cpsf1 15 76595808 to 76607591 11783 - protein coding gene cleavage and polyadenylation specific factor 1
Cpgi7241 15 76607054 to 76607945 891 CpG island CpG island 7241
Tssr135017 15 76607484 to 76607542 58 - TSS region transcription start site region 135017
Tssr135018 15 76607568 to 76607593 25 - TSS region transcription start site region 135018
Slc39a4 15 76612383 to 76617379 4996 - protein coding gene solute carrier family 39 (zinc transporter), member 4
Cpgi7242 15 76612554 to 76613443 889 CpG island CpG island 7242
Tssr135019 15 76612700 to 76612715 15 - TSS region transcription start site region 135019
Tssr135020 15 76612923 to 76612962 39 - TSS region transcription start site region 135020
Tssr135021 15 76612965 to 76612972 7 - TSS region transcription start site region 135021
Tssr135022 15 76614217 to 76614251 34 - TSS region transcription start site region 135022
Tssr135023 15 76614357 to 76614367 10 - TSS region transcription start site region 135023
Tssr135024 15 76615041 to 76615055 14 - TSS region transcription start site region 135024
Tssr135025 15 76615912 to 76615960 48 - TSS region transcription start site region 135025
Tssr135026 15 76616458 to 76616479 21 - TSS region transcription start site region 135026
Tssr131805 15 76616646 to 76616651 5 + TSS region transcription start site region 131805
Tssr135027 15 76616825 to 76616837 12 - TSS region transcription start site region 135027
Tssr135028 15 76616841 to 76616876 35 - TSS region transcription start site region 135028
Tssr135029 15 76617115 to 76617126 11 - TSS region transcription start site region 135029
Tssr135030 15 76617129 to 76617146 17 - TSS region transcription start site region 135030
Tssr135031 15 76617325 to 76617374 49 - TSS region transcription start site region 135031
Vps28 15 76622086 to 76626084 3998 - protein coding gene vacuolar protein sorting 28
Cpgi7243 15 76625606 to 76626297 691 CpG island CpG island 7243
Tssr135032 15 76626007 to 76626089 82 - TSS region transcription start site region 135032
Tssr131806 15 76626189 to 76626208 19 + TSS region transcription start site region 131806
Tssr131807 15 76626213 to 76626226 13 + TSS region transcription start site region 131807
Tonsl 15 76626237 to 76639929 13692 - protein coding gene tonsoku-like, DNA repair protein
Cpgi7244 15 76639410 to 76640086 676 CpG island CpG island 7244
Tssr135033 15 76639795 to 76639798 3 - TSS region transcription start site region 135033
Tssr135034 15 76639898 to 76639952 54 - TSS region transcription start site region 135034
Cyhr1 15 76643395 to 76660117 16722 - protein coding gene cysteine and histidine rich 1
Cpgi7245 15 76656131 to 76657418 1287 CpG island CpG island 7245
Tssr135035 15 76656735 to 76656747 12 - TSS region transcription start site region 135035
Tssr135036 15 76656750 to 76656769 19 - TSS region transcription start site region 135036
Tssr135037 15 76656905 to 76656934 29 - TSS region transcription start site region 135037
Cpgi7246 15 76659599 to 76661422 1823 CpG island CpG island 7246
Tssr135038 15 76659658 to 76659681 23 - TSS region transcription start site region 135038
Tssr135039 15 76659691 to 76659743 52 - TSS region transcription start site region 135039
Tssr131808 15 76659849 to 76659903 54 + TSS region transcription start site region 131808
Kifc2 15 76659858 to 76668196 8338 + protein coding gene kinesin family member C2
Tssr135040 15 76660087 to 76660098 11 - TSS region transcription start site region 135040
Tssr135041 15 76660111 to 76660142 31 - TSS region transcription start site region 135041
Tssr131809 15 76660328 to 76660361 33 + TSS region transcription start site region 131809
Tssr131810 15 76660564 to 76660610 46 + TSS region transcription start site region 131810
Tssr131811 15 76667479 to 76667496 17 + TSS region transcription start site region 131811
Tssr131812 15 76667689 to 76667700 11 + TSS region transcription start site region 131812
Foxh1 15 76668225 to 76669948 1723 - protein coding gene forkhead box H1
Cpgi7247 15 76668996 to 76669221 225 CpG island CpG island 7247
Tssr135042 15 76669669 to 76669681 12 - TSS region transcription start site region 135042
Tssr135043 15 76669799 to 76669804 5 - TSS region transcription start site region 135043
Tssr135044 15 76669811 to 76669820 9 - TSS region transcription start site region 135044
Tssr135045 15 76669832 to 76669851 19 - TSS region transcription start site region 135045
Tssr135046 15 76669865 to 76669890 25 - TSS region transcription start site region 135046
Cpgi7248 15 76671478 to 76672041 563 CpG island CpG island 7248
Ppp1r16a 15 76671620 to 76694919 23299 + protein coding gene protein phosphatase 1, regulatory subunit 16A
Tssr131813 15 76671626 to 76671710 84 + TSS region transcription start site region 131813
Tssr4643 15 76671713 to 76671731 18 + TSS region transcription start site region 4643
Tssr131814 15 76690558 to 76690579 21 + TSS region transcription start site region 131814
Tssr131815 15 76690584 to 76690610 26 + TSS region transcription start site region 131815