Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:76059111-76200773

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scrib 15 76047162 to 76069784 22622 - protein coding gene scribbled planar cell polarity
Mir6952 15 76064828 to 76064888 60 - miRNA gene microRNA 6952
Cpgi7210 15 76068937 to 76070360 1423 CpG island CpG island 7210
Tssr134903 15 76069394 to 76069455 61 - TSS region transcription start site region 134903
Tssr134904 15 76069681 to 76069759 78 - TSS region transcription start site region 134904
Tssr134905 15 76069760 to 76069777 17 - TSS region transcription start site region 134905
Puf60 15 76070182 to 76080924 10742 - protein coding gene poly-U binding splicing factor 60
Tssr134906 15 76070922 to 76070940 18 - TSS region transcription start site region 134906
Tssr134907 15 76071551 to 76071582 31 - TSS region transcription start site region 134907
Cpgi7211 15 76080017 to 76081466 1449 CpG island CpG island 7211
Tssr131709 15 76080647 to 76080656 9 + TSS region transcription start site region 131709
Tssr134908 15 76080875 to 76080893 18 - TSS region transcription start site region 134908
Tssr134909 15 76080894 to 76080921 27 - TSS region transcription start site region 134909
Tssr134910 15 76080933 to 76080944 11 - TSS region transcription start site region 134910
Gm48952 15 76083764 to 76087655 3891 + lincRNA gene predicted gene, 48952
Nrbp2 15 76085518 to 76091594 6076 - protein coding gene nuclear receptor binding protein 2
Cpgi7212 15 76090079 to 76092137 2058 CpG island CpG island 7212
Tssr134911 15 76091492 to 76091530 38 - TSS region transcription start site region 134911
Tssr134912 15 76091594 to 76091653 59 - TSS region transcription start site region 134912
Tssr134913 15 76091654 to 76091671 17 - TSS region transcription start site region 134913
Tssr134914 15 76091684 to 76091741 57 - TSS region transcription start site region 134914
Gm41349 15 76095575 to 76097668 2093 + lincRNA gene predicted gene, 41349
Eppk1 15 76101488 to 76120195 18707 - protein coding gene epiplakin 1
Cpgi7213 15 76108967 to 76109181 214 CpG island CpG island 7213
Gm46532 15 76110258 to 76114129 3871 + lncRNA gene predicted gene, 46532
Tssr131710 15 76117791 to 76117798 7 + TSS region transcription start site region 131710
Cpgi7214 15 76119016 to 76119190 174 CpG island CpG island 7214
Tssr134915 15 76119148 to 76119162 14 - TSS region transcription start site region 134915
Tssr134916 15 76119293 to 76119315 22 - TSS region transcription start site region 134916
BC024139 15 76119517 to 76126556 7039 - protein coding gene cDNA sequence BC024139
Tssr134917 15 76124649 to 76124664 15 - TSS region transcription start site region 134917
Tssr134918 15 76126538 to 76126550 12 - TSS region transcription start site region 134918
Gm35087 15 76129111 to 76130773 1662 - lncRNA gene predicted gene, 35087
Tssr131711 15 76150278 to 76150279 1 + TSS region transcription start site region 131711
Gm19945 15 76150368 to 76150607 239 + pseudogene predicted gene, 19945
Plec 15 76170974 to 76231378 60404 - protein coding gene plectin
Tssr134919 15 76172067 to 76172077 10 - TSS region transcription start site region 134919
Tssr131712 15 76172093 to 76172109 16 + TSS region transcription start site region 131712
Tssr134920 15 76180667 to 76180689 22 - TSS region transcription start site region 134920
Cpgi7215 15 76185972 to 76186149 177 CpG island CpG island 7215
Tssr131713 15 76188208 to 76188233 25 + TSS region transcription start site region 131713
Tssr134921 15 76188966 to 76188978 12 - TSS region transcription start site region 134921
Cpgi7216 15 76190116 to 76190383 267 CpG island CpG island 7216
Tssr134922 15 76190173 to 76190182 9 - TSS region transcription start site region 134922
Tssr134923 15 76190299 to 76190315 16 - TSS region transcription start site region 134923
Tssr131714 15 76190474 to 76190482 8 + TSS region transcription start site region 131714
Cpgi7217 15 76195525 to 76195716 191 CpG island CpG island 7217
Tssr134924 15 76195666 to 76195677 11 - TSS region transcription start site region 134924
Tssr134925 15 76195691 to 76195706 15 - TSS region transcription start site region 134925
Tssr134926 15 76195712 to 76195717 5 - TSS region transcription start site region 134926
Tssr4632 15 76196236 to 76196241 5 + TSS region transcription start site region 4632
Tssr134927 15 76196606 to 76196624 18 - TSS region transcription start site region 134927
Cpgi7218 15 76197890 to 76198819 929 CpG island CpG island 7218
Tssr134928 15 76198147 to 76198204 57 - TSS region transcription start site region 134928
Tssr134929 15 76198218 to 76198227 9 - TSS region transcription start site region 134929
Tssr4633 15 76198425 to 76198436 11 - TSS region transcription start site region 4633
Tssr4634 15 76199375 to 76199395 20 - TSS region transcription start site region 4634
Cpgi7219 15 76199446 to 76199910 464 CpG island CpG island 7219
Tssr131715 15 76199523 to 76199536 13 + TSS region transcription start site region 131715
Tssr131716 15 76199550 to 76199562 12 + TSS region transcription start site region 131716
Tssr131717 15 76199579 to 76199590 11 + TSS region transcription start site region 131717
Tssr134930 15 76199812 to 76199831 19 - TSS region transcription start site region 134930
Tssr134931 15 76199835 to 76199859 24 - TSS region transcription start site region 134931
Tssr134932 15 76199862 to 76199894 32 - TSS region transcription start site region 134932
Tssr134933 15 76199958 to 76199972 14 - TSS region transcription start site region 134933
Tssr134934 15 76200552 to 76200563 11 - TSS region transcription start site region 134934
Tssr134935 15 76200567 to 76200576 9 - TSS region transcription start site region 134935
Tssr134936 15 76200577 to 76200621 44 - TSS region transcription start site region 134936
Tssr134937 15 76200623 to 76200634 11 - TSS region transcription start site region 134937