Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:76017047-78951069

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1039 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
Dpml 15 51141298 to 76910293 25768995 QTL dopamine loss
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
Iqank1 15 76009888 to 76046981 37093 + protein coding gene IQ motif and ankyrin repeat containing 1
Tssr131706 15 76032839 to 76032842 3 + TSS region transcription start site region 131706
Tssr131707 15 76033045 to 76033055 10 + TSS region transcription start site region 131707
Cpgi7209 15 76033894 to 76035171 1277 CpG island CpG island 7209
Tssr131708 15 76034697 to 76034714 17 + TSS region transcription start site region 131708
Gm23027 15 76036459 to 76036616 157 + snRNA gene predicted gene, 23027
Scrib 15 76047162 to 76069784 22622 - protein coding gene scribbled planar cell polarity
Tssr134897 15 76047656 to 76047701 45 - TSS region transcription start site region 134897
Tssr134898 15 76048487 to 76048498 11 - TSS region transcription start site region 134898
Tssr134899 15 76048570 to 76048580 10 - TSS region transcription start site region 134899
Tssr134900 15 76049213 to 76049260 47 - TSS region transcription start site region 134900
Tssr134901 15 76050776 to 76050795 19 - TSS region transcription start site region 134901
Tssr134902 15 76051916 to 76051942 26 - TSS region transcription start site region 134902
Mir6952 15 76064828 to 76064888 60 - miRNA gene microRNA 6952
Cpgi7210 15 76068937 to 76070360 1423 CpG island CpG island 7210
Tssr134903 15 76069394 to 76069455 61 - TSS region transcription start site region 134903
Tssr134904 15 76069681 to 76069759 78 - TSS region transcription start site region 134904
Tssr134905 15 76069760 to 76069777 17 - TSS region transcription start site region 134905
Puf60 15 76070182 to 76080924 10742 - protein coding gene poly-U binding splicing factor 60
Tssr134906 15 76070922 to 76070940 18 - TSS region transcription start site region 134906
Tssr134907 15 76071551 to 76071582 31 - TSS region transcription start site region 134907
Cpgi7211 15 76080017 to 76081466 1449 CpG island CpG island 7211
Tssr131709 15 76080647 to 76080656 9 + TSS region transcription start site region 131709
Tssr134908 15 76080875 to 76080893 18 - TSS region transcription start site region 134908
Tssr134909 15 76080894 to 76080921 27 - TSS region transcription start site region 134909
Tssr134910 15 76080933 to 76080944 11 - TSS region transcription start site region 134910
Gm48952 15 76083764 to 76087655 3891 + lincRNA gene predicted gene, 48952
Nrbp2 15 76085518 to 76091594 6076 - protein coding gene nuclear receptor binding protein 2
Cpgi7212 15 76090079 to 76092137 2058 CpG island CpG island 7212
Tssr134911 15 76091492 to 76091530 38 - TSS region transcription start site region 134911
Tssr134912 15 76091594 to 76091653 59 - TSS region transcription start site region 134912
Tssr134913 15 76091654 to 76091671 17 - TSS region transcription start site region 134913
Tssr134914 15 76091684 to 76091741 57 - TSS region transcription start site region 134914
Gm41349 15 76095575 to 76097668 2093 + lincRNA gene predicted gene, 41349
Eppk1 15 76101488 to 76120195 18707 - protein coding gene epiplakin 1
Cpgi7213 15 76108967 to 76109181 214 CpG island CpG island 7213
Gm46532 15 76110258 to 76114129 3871 + lncRNA gene predicted gene, 46532
Tssr131710 15 76117791 to 76117798 7 + TSS region transcription start site region 131710
Cpgi7214 15 76119016 to 76119190 174 CpG island CpG island 7214
Tssr134915 15 76119148 to 76119162 14 - TSS region transcription start site region 134915
Tssr134916 15 76119293 to 76119315 22 - TSS region transcription start site region 134916
BC024139 15 76119517 to 76126556 7039 - protein coding gene cDNA sequence BC024139
Tssr134917 15 76124649 to 76124664 15 - TSS region transcription start site region 134917
Tssr134918 15 76126538 to 76126550 12 - TSS region transcription start site region 134918
Gm35087 15 76129111 to 76130773 1662 - lncRNA gene predicted gene, 35087
Tssr131711 15 76150278 to 76150279 1 + TSS region transcription start site region 131711
Gm19945 15 76150368 to 76150607 239 + pseudogene predicted gene, 19945
Plec 15 76170974 to 76231378 60404 - protein coding gene plectin
Tssr134919 15 76172067 to 76172077 10 - TSS region transcription start site region 134919
Tssr131712 15 76172093 to 76172109 16 + TSS region transcription start site region 131712
Tssr134920 15 76180667 to 76180689 22 - TSS region transcription start site region 134920
Cpgi7215 15 76185972 to 76186149 177 CpG island CpG island 7215
Tssr131713 15 76188208 to 76188233 25 + TSS region transcription start site region 131713
Tssr134921 15 76188966 to 76188978 12 - TSS region transcription start site region 134921
Cpgi7216 15 76190116 to 76190383 267 CpG island CpG island 7216
Tssr134922 15 76190173 to 76190182 9 - TSS region transcription start site region 134922
Tssr134923 15 76190299 to 76190315 16 - TSS region transcription start site region 134923
Tssr131714 15 76190474 to 76190482 8 + TSS region transcription start site region 131714
Cpgi7217 15 76195525 to 76195716 191 CpG island CpG island 7217
Tssr134924 15 76195666 to 76195677 11 - TSS region transcription start site region 134924
Tssr134925 15 76195691 to 76195706 15 - TSS region transcription start site region 134925
Tssr134926 15 76195712 to 76195717 5 - TSS region transcription start site region 134926
Tssr4632 15 76196236 to 76196241 5 + TSS region transcription start site region 4632
Tssr134927 15 76196606 to 76196624 18 - TSS region transcription start site region 134927
Cpgi7218 15 76197890 to 76198819 929 CpG island CpG island 7218
Tssr134928 15 76198147 to 76198204 57 - TSS region transcription start site region 134928
Tssr134929 15 76198218 to 76198227 9 - TSS region transcription start site region 134929
Tssr4633 15 76198425 to 76198436 11 - TSS region transcription start site region 4633
Tssr4634 15 76199375 to 76199395 20 - TSS region transcription start site region 4634
Cpgi7219 15 76199446 to 76199910 464 CpG island CpG island 7219
Tssr131715 15 76199523 to 76199536 13 + TSS region transcription start site region 131715
Tssr131716 15 76199550 to 76199562 12 + TSS region transcription start site region 131716
Tssr131717 15 76199579 to 76199590 11 + TSS region transcription start site region 131717
Tssr134930 15 76199812 to 76199831 19 - TSS region transcription start site region 134930
Tssr134931 15 76199835 to 76199859 24 - TSS region transcription start site region 134931
Tssr134932 15 76199862 to 76199894 32 - TSS region transcription start site region 134932
Tssr134933 15 76199958 to 76199972 14 - TSS region transcription start site region 134933
Tssr134934 15 76200552 to 76200563 11 - TSS region transcription start site region 134934
Tssr134935 15 76200567 to 76200576 9 - TSS region transcription start site region 134935
Tssr134936 15 76200577 to 76200621 44 - TSS region transcription start site region 134936
Tssr134937 15 76200623 to 76200634 11 - TSS region transcription start site region 134937
Tssr134938 15 76202228 to 76202246 18 - TSS region transcription start site region 134938
Tssr134939 15 76202261 to 76202274 13 - TSS region transcription start site region 134939
Tssr131718 15 76204351 to 76204367 16 + TSS region transcription start site region 131718
Tssr134940 15 76206235 to 76206243 8 - TSS region transcription start site region 134940
Tssr134941 15 76206297 to 76206302 5 - TSS region transcription start site region 134941
Tssr134942 15 76206309 to 76206357 48 - TSS region transcription start site region 134942
Tssr134943 15 76209056 to 76209126 70 - TSS region transcription start site region 134943
Tssr4635 15 76210717 to 76210718 1 + TSS region transcription start site region 4635
Gm25720 15 76214101 to 76214205 104 - snRNA gene predicted gene, 25720
Mir1942 15 76215611 to 76215673 62 - miRNA gene microRNA 1942
Cpgi7220 15 76229076 to 76229890 814 CpG island CpG island 7220
Tssr134944 15 76229492 to 76229511 19 - TSS region transcription start site region 134944
Tssr134945 15 76229522 to 76229540 18 - TSS region transcription start site region 134945
Cpgi7221 15 76231855 to 76233802 1947 CpG island CpG island 7221
Tssr134946 15 76232046 to 76232054 8 - TSS region transcription start site region 134946
Tssr134947 15 76232061 to 76232076 15 - TSS region transcription start site region 134947
Tssr134948 15 76232079 to 76232096 17 - TSS region transcription start site region 134948
Tssr134949 15 76232554 to 76232634 80 - TSS region transcription start site region 134949
Parp10 15 76232995 to 76243440 10445 - protein coding gene poly (ADP-ribose) polymerase family, member 10
Tssr134950 15 76233801 to 76233816 15 - TSS region transcription start site region 134950
Tssr4636 15 76234944 to 76234981 37 - TSS region transcription start site region 4636
Tssr134951 15 76241284 to 76241289 5 - TSS region transcription start site region 134951
Tssr134952 15 76242618 to 76242627 9 - TSS region transcription start site region 134952
Tssr134953 15 76242645 to 76242657 12 - TSS region transcription start site region 134953
Tssr134954 15 76243109 to 76243130 21 - TSS region transcription start site region 134954
Tssr134955 15 76243132 to 76243166 34 - TSS region transcription start site region 134955
Tssr134956 15 76243170 to 76243181 11 - TSS region transcription start site region 134956
Tssr134957 15 76243379 to 76243396 17 - TSS region transcription start site region 134957
Tssr134958 15 76243401 to 76243448 47 - TSS region transcription start site region 134958
Tssr131719 15 76243480 to 76243531 51 + TSS region transcription start site region 131719
Cpgi7222 15 76246486 to 76247710 1224 CpG island CpG island 7222
Tssr4637 15 76246577 to 76246589 12 - TSS region transcription start site region 4637
Tssr134959 15 76246609 to 76246634 25 - TSS region transcription start site region 134959
Tssr131720 15 76246747 to 76246806 59 + TSS region transcription start site region 131720
Grina 15 76246764 to 76249904 3140 + protein coding gene glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
Tssr131721 15 76246816 to 76246831 15 + TSS region transcription start site region 131721
Tssr131722 15 76246838 to 76246856 18 + TSS region transcription start site region 131722
Tssr131723 15 76247012 to 76247023 11 + TSS region transcription start site region 131723
Tssr131724 15 76247371 to 76247408 37 + TSS region transcription start site region 131724
Tssr131725 15 76247526 to 76247541 15 + TSS region transcription start site region 131725
Tssr131726 15 76247598 to 76247609 11 + TSS region transcription start site region 131726
Tssr134960 15 76247612 to 76247661 49 - TSS region transcription start site region 134960
Tssr131727 15 76247664 to 76247676 12 + TSS region transcription start site region 131727
Tssr131728 15 76247684 to 76247695 11 + TSS region transcription start site region 131728
Tssr131729 15 76247823 to 76247836 13 + TSS region transcription start site region 131729
Tssr131730 15 76247844 to 76247856 12 + TSS region transcription start site region 131730
Tssr131731 15 76247907 to 76247923 16 + TSS region transcription start site region 131731
Tssr131732 15 76247932 to 76247953 21 + TSS region transcription start site region 131732
Tssr131733 15 76247977 to 76247989 12 + TSS region transcription start site region 131733
Tssr131734 15 76247994 to 76248018 24 + TSS region transcription start site region 131734
Tssr134961 15 76248014 to 76248048 34 - TSS region transcription start site region 134961
Tssr131735 15 76248061 to 76248072 11 + TSS region transcription start site region 131735
Tssr131736 15 76248105 to 76248142 37 + TSS region transcription start site region 131736
Tssr134962 15 76248144 to 76248173 29 - TSS region transcription start site region 134962
Mir6953 15 76248191 to 76248258 67 + miRNA gene microRNA 6953
Tssr131737 15 76248278 to 76248298 20 + TSS region transcription start site region 131737
Tssr131738 15 76248445 to 76248472 27 + TSS region transcription start site region 131738
Tssr131739 15 76248496 to 76248498 2 + TSS region transcription start site region 131739
Tssr131740 15 76248515 to 76248563 48 + TSS region transcription start site region 131740
Tssr131741 15 76248601 to 76248624 23 + TSS region transcription start site region 131741
Tssr131742 15 76248799 to 76248812 13 + TSS region transcription start site region 131742
Tssr131743 15 76248816 to 76248842 26 + TSS region transcription start site region 131743
Tssr131744 15 76248843 to 76248861 18 + TSS region transcription start site region 131744
Tssr131745 15 76248976 to 76248988 12 + TSS region transcription start site region 131745
Tssr131746 15 76249018 to 76249042 24 + TSS region transcription start site region 131746
Tssr131747 15 76249076 to 76249090 14 + TSS region transcription start site region 131747
Tssr131748 15 76249237 to 76249266 29 + TSS region transcription start site region 131748
Tssr131749 15 76249267 to 76249342 75 + TSS region transcription start site region 131749
Tssr134963 15 76249309 to 76249350 41 - TSS region transcription start site region 134963
Tssr134964 15 76249359 to 76249381 22 - TSS region transcription start site region 134964
Tssr134965 15 76249391 to 76249406 15 - TSS region transcription start site region 134965
Tssr131750 15 76249474 to 76249489 15 + TSS region transcription start site region 131750
Tssr134966 15 76249505 to 76249539 34 - TSS region transcription start site region 134966
Tssr131751 15 76249546 to 76249560 14 + TSS region transcription start site region 131751
Tssr134967 15 76249901 to 76249914 13 - TSS region transcription start site region 134967
D15Mit188a 15 76257854 to 76258033 179 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 188a
D15Mit188b 15 76257897 to 76258033 136 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 188b
Tssr131752 15 76266520 to 76266531 11 + TSS region transcription start site region 131752
Tssr131753 15 76266555 to 76266576 21 + TSS region transcription start site region 131753
Tssr131754 15 76266584 to 76266593 9 + TSS region transcription start site region 131754
Mirt2 15 76266787 to 76269839 3052 - lncRNA gene myocardial infraction associated transcript 2
Tssr131755 15 76266949 to 76266962 13 + TSS region transcription start site region 131755
Tssr131756 15 76268076 to 76268093 17 + TSS region transcription start site region 131756
Spatc1 15 76268089 to 76292572 24483 + protein coding gene spermatogenesis and centriole associated 1
Tssr4638 15 76269161 to 76269170 9 - TSS region transcription start site region 4638
Tssr134968 15 76269827 to 76269847 20 - TSS region transcription start site region 134968
Tssr134969 15 76269848 to 76269858 10 - TSS region transcription start site region 134969
Tssr4639 15 76269992 to 76270002 10 + TSS region transcription start site region 4639
Tssr4640 15 76270003 to 76270013 10 + TSS region transcription start site region 4640
Tssr131757 15 76270934 to 76270945 11 + TSS region transcription start site region 131757
Tssr131758 15 76270961 to 76270978 17 + TSS region transcription start site region 131758
Tssr4641 15 76270985 to 76270988 3 + TSS region transcription start site region 4641
Tssr134970 15 76273825 to 76273839 14 - TSS region transcription start site region 134970
Tssr134971 15 76273882 to 76273914 32 - TSS region transcription start site region 134971
Tssr131759 15 76274133 to 76274140 7 + TSS region transcription start site region 131759
Tssr131760 15 76274223 to 76274230 7 + TSS region transcription start site region 131760
Tssr131761 15 76274231 to 76274236 5 + TSS region transcription start site region 131761
Tssr131762 15 76274358 to 76274375 17 + TSS region transcription start site region 131762
Tssr131763 15 76274390 to 76274402 12 + TSS region transcription start site region 131763
Tssr134972 15 76280949 to 76280955 6 - TSS region transcription start site region 134972
Tssr134973 15 76280971 to 76280978 7 - TSS region transcription start site region 134973
Tssr4642 15 76280987 to 76281000 13 - TSS region transcription start site region 4642
Cpgi7223 15 76284584 to 76285015 431 CpG island CpG island 7223
Tssr134974 15 76287750 to 76287771 21 - TSS region transcription start site region 134974
Mir3079 15 76290879 to 76290968 89 - miRNA gene microRNA 3079
Cpgi7224 15 76292216 to 76292533 317 CpG island CpG island 7224
Cpgi7225 15 76294301 to 76295423 1122 CpG island CpG island 7225
Tssr131764 15 76294343 to 76294355 12 + TSS region transcription start site region 131764
Smpd5 15 76294348 to 76296896 2548 + protein coding gene sphingomyelin phosphodiesterase 5
Tssr131765 15 76294357 to 76294380 23 + TSS region transcription start site region 131765
Tssr131766 15 76294391 to 76294409 18 + TSS region transcription start site region 131766
Tssr134975 15 76294722 to 76294754 32 - TSS region transcription start site region 134975