Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:75926551-76216582

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131 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tsta3 15 75924669 to 75929821 5152 - protein coding gene tissue specific transplantation antigen P35B
Tssr134887 15 75928646 to 75928688 42 - TSS region transcription start site region 134887
Cpgi7200 15 75929371 to 75929987 616 CpG island CpG island 7200
Tssr134888 15 75929698 to 75929719 21 - TSS region transcription start site region 134888
Tssr134889 15 75929733 to 75929772 39 - TSS region transcription start site region 134889
Tssr134890 15 75929781 to 75929792 11 - TSS region transcription start site region 134890
Cpgi7201 15 75940809 to 75941762 953 CpG island CpG island 7201
Zfp623 15 75940952 to 75949400 8448 + protein coding gene zinc finger protein 623
Tssr131692 15 75940993 to 75941015 22 + TSS region transcription start site region 131692
Tssr131693 15 75941024 to 75941091 67 + TSS region transcription start site region 131693
Eif2s3x-ps1 15 75967227 to 75968335 1108 - pseudogene eukaryotic translation initiation factor 2, subunit 3, pseudogene 1
Cpgi7202 15 75968940 to 75969787 847 CpG island CpG island 7202
Tssr131694 15 75969118 to 75969160 42 + TSS region transcription start site region 131694
Zfp707 15 75969127 to 75975865 6738 + protein coding gene zinc finger protein 707
Tssr131695 15 75969168 to 75969189 21 + TSS region transcription start site region 131695
Tssr131696 15 75969204 to 75969215 11 + TSS region transcription start site region 131696
Tssr131697 15 75969287 to 75969312 25 + TSS region transcription start site region 131697
Ccdc166 15 75979872 to 75982285 2413 - protein coding gene coiled-coil domain containing 166
Cpgi7203 15 75980920 to 75982482 1562 CpG island CpG island 7203
Tssr134891 15 75981823 to 75981838 15 - TSS region transcription start site region 134891
Tssr134892 15 75981944 to 75982000 56 - TSS region transcription start site region 134892
Tssr131698 15 75982038 to 75982061 23 + TSS region transcription start site region 131698
Cpgi7204 15 75993647 to 75994064 417 CpG island CpG island 7204
Tssr131699 15 75993725 to 75993734 9 + TSS region transcription start site region 131699
Tssr131700 15 75993756 to 75993832 76 + TSS region transcription start site region 131700
Mapk15 15 75993769 to 75999154 5385 + protein coding gene mitogen-activated protein kinase 15
Tssr131701 15 75996762 to 75996778 16 + TSS region transcription start site region 131701
Cpgi7205 15 75997450 to 75999081 1631 CpG island CpG island 7205
Fam83h 15 76001093 to 76014336 13243 - protein coding gene family with sequence similarity 83, member H
Cpgi7206 15 76001942 to 76002644 702 CpG island CpG island 7206
Cpgi7207 15 76002902 to 76004745 1843 CpG island CpG island 7207
Cpgi7208 15 76008962 to 76010244 1282 CpG island CpG island 7208
Tssr134893 15 76009440 to 76009479 39 - TSS region transcription start site region 134893
Tssr131702 15 76009575 to 76009591 16 + TSS region transcription start site region 131702
Tssr131703 15 76009863 to 76009893 30 + TSS region transcription start site region 131703
Iqank1 15 76009888 to 76046981 37093 + protein coding gene IQ motif and ankyrin repeat containing 1
Tssr131704 15 76009899 to 76009921 22 + TSS region transcription start site region 131704
Tssr134894 15 76013172 to 76013183 11 - TSS region transcription start site region 134894
Tssr134895 15 76013622 to 76013627 5 - TSS region transcription start site region 134895
Tssr134896 15 76014318 to 76014346 28 - TSS region transcription start site region 134896
Tssr131705 15 76016686 to 76016687 1 + TSS region transcription start site region 131705
Tssr131706 15 76032839 to 76032842 3 + TSS region transcription start site region 131706
Tssr131707 15 76033045 to 76033055 10 + TSS region transcription start site region 131707
Cpgi7209 15 76033894 to 76035171 1277 CpG island CpG island 7209
Tssr131708 15 76034697 to 76034714 17 + TSS region transcription start site region 131708
Gm23027 15 76036459 to 76036616 157 + snRNA gene predicted gene, 23027
Scrib 15 76047162 to 76069784 22622 - protein coding gene scribbled planar cell polarity
Tssr134897 15 76047656 to 76047701 45 - TSS region transcription start site region 134897
Tssr134898 15 76048487 to 76048498 11 - TSS region transcription start site region 134898
Tssr134899 15 76048570 to 76048580 10 - TSS region transcription start site region 134899
Tssr134900 15 76049213 to 76049260 47 - TSS region transcription start site region 134900
Tssr134901 15 76050776 to 76050795 19 - TSS region transcription start site region 134901
Tssr134902 15 76051916 to 76051942 26 - TSS region transcription start site region 134902
Mir6952 15 76064828 to 76064888 60 - miRNA gene microRNA 6952
Cpgi7210 15 76068937 to 76070360 1423 CpG island CpG island 7210
Tssr134903 15 76069394 to 76069455 61 - TSS region transcription start site region 134903
Tssr134904 15 76069681 to 76069759 78 - TSS region transcription start site region 134904
Tssr134905 15 76069760 to 76069777 17 - TSS region transcription start site region 134905
Puf60 15 76070182 to 76080924 10742 - protein coding gene poly-U binding splicing factor 60
Tssr134906 15 76070922 to 76070940 18 - TSS region transcription start site region 134906
Tssr134907 15 76071551 to 76071582 31 - TSS region transcription start site region 134907
Cpgi7211 15 76080017 to 76081466 1449 CpG island CpG island 7211
Tssr131709 15 76080647 to 76080656 9 + TSS region transcription start site region 131709
Tssr134908 15 76080875 to 76080893 18 - TSS region transcription start site region 134908
Tssr134909 15 76080894 to 76080921 27 - TSS region transcription start site region 134909
Tssr134910 15 76080933 to 76080944 11 - TSS region transcription start site region 134910
Gm48952 15 76083764 to 76087655 3891 + lincRNA gene predicted gene, 48952
Nrbp2 15 76085518 to 76091594 6076 - protein coding gene nuclear receptor binding protein 2
Cpgi7212 15 76090079 to 76092137 2058 CpG island CpG island 7212
Tssr134911 15 76091492 to 76091530 38 - TSS region transcription start site region 134911
Tssr134912 15 76091594 to 76091653 59 - TSS region transcription start site region 134912
Tssr134913 15 76091654 to 76091671 17 - TSS region transcription start site region 134913
Tssr134914 15 76091684 to 76091741 57 - TSS region transcription start site region 134914
Gm41349 15 76095575 to 76097668 2093 + lincRNA gene predicted gene, 41349
Eppk1 15 76101488 to 76120195 18707 - protein coding gene epiplakin 1
Cpgi7213 15 76108967 to 76109181 214 CpG island CpG island 7213
Gm46532 15 76110258 to 76114129 3871 + lncRNA gene predicted gene, 46532
Tssr131710 15 76117791 to 76117798 7 + TSS region transcription start site region 131710
Cpgi7214 15 76119016 to 76119190 174 CpG island CpG island 7214
Tssr134915 15 76119148 to 76119162 14 - TSS region transcription start site region 134915
Tssr134916 15 76119293 to 76119315 22 - TSS region transcription start site region 134916
BC024139 15 76119517 to 76126556 7039 - protein coding gene cDNA sequence BC024139
Tssr134917 15 76124649 to 76124664 15 - TSS region transcription start site region 134917
Tssr134918 15 76126538 to 76126550 12 - TSS region transcription start site region 134918
Gm35087 15 76129111 to 76130773 1662 - lncRNA gene predicted gene, 35087
Tssr131711 15 76150278 to 76150279 1 + TSS region transcription start site region 131711
Gm19945 15 76150368 to 76150607 239 + pseudogene predicted gene, 19945
Plec 15 76170974 to 76231378 60404 - protein coding gene plectin
Tssr134919 15 76172067 to 76172077 10 - TSS region transcription start site region 134919
Tssr131712 15 76172093 to 76172109 16 + TSS region transcription start site region 131712
Tssr134920 15 76180667 to 76180689 22 - TSS region transcription start site region 134920
Cpgi7215 15 76185972 to 76186149 177 CpG island CpG island 7215
Tssr131713 15 76188208 to 76188233 25 + TSS region transcription start site region 131713
Tssr134921 15 76188966 to 76188978 12 - TSS region transcription start site region 134921
Cpgi7216 15 76190116 to 76190383 267 CpG island CpG island 7216
Tssr134922 15 76190173 to 76190182 9 - TSS region transcription start site region 134922
Tssr134923 15 76190299 to 76190315 16 - TSS region transcription start site region 134923
Tssr131714 15 76190474 to 76190482 8 + TSS region transcription start site region 131714
Cpgi7217 15 76195525 to 76195716 191 CpG island CpG island 7217
Tssr134924 15 76195666 to 76195677 11 - TSS region transcription start site region 134924
Tssr134925 15 76195691 to 76195706 15 - TSS region transcription start site region 134925
Tssr134926 15 76195712 to 76195717 5 - TSS region transcription start site region 134926
Tssr4632 15 76196236 to 76196241 5 + TSS region transcription start site region 4632
Tssr134927 15 76196606 to 76196624 18 - TSS region transcription start site region 134927
Cpgi7218 15 76197890 to 76198819 929 CpG island CpG island 7218
Tssr134928 15 76198147 to 76198204 57 - TSS region transcription start site region 134928
Tssr134929 15 76198218 to 76198227 9 - TSS region transcription start site region 134929
Tssr4633 15 76198425 to 76198436 11 - TSS region transcription start site region 4633
Tssr4634 15 76199375 to 76199395 20 - TSS region transcription start site region 4634
Cpgi7219 15 76199446 to 76199910 464 CpG island CpG island 7219
Tssr131715 15 76199523 to 76199536 13 + TSS region transcription start site region 131715
Tssr131716 15 76199550 to 76199562 12 + TSS region transcription start site region 131716
Tssr131717 15 76199579 to 76199590 11 + TSS region transcription start site region 131717
Tssr134930 15 76199812 to 76199831 19 - TSS region transcription start site region 134930
Tssr134931 15 76199835 to 76199859 24 - TSS region transcription start site region 134931
Tssr134932 15 76199862 to 76199894 32 - TSS region transcription start site region 134932
Tssr134933 15 76199958 to 76199972 14 - TSS region transcription start site region 134933
Tssr134934 15 76200552 to 76200563 11 - TSS region transcription start site region 134934
Tssr134935 15 76200567 to 76200576 9 - TSS region transcription start site region 134935
Tssr134936 15 76200577 to 76200621 44 - TSS region transcription start site region 134936
Tssr134937 15 76200623 to 76200634 11 - TSS region transcription start site region 134937
Tssr134938 15 76202228 to 76202246 18 - TSS region transcription start site region 134938
Tssr134939 15 76202261 to 76202274 13 - TSS region transcription start site region 134939
Tssr131718 15 76204351 to 76204367 16 + TSS region transcription start site region 131718
Tssr134940 15 76206235 to 76206243 8 - TSS region transcription start site region 134940
Tssr134941 15 76206297 to 76206302 5 - TSS region transcription start site region 134941
Tssr134942 15 76206309 to 76206357 48 - TSS region transcription start site region 134942
Tssr134943 15 76209056 to 76209126 70 - TSS region transcription start site region 134943
Tssr4635 15 76210717 to 76210718 1 + TSS region transcription start site region 4635
Gm25720 15 76214101 to 76214205 104 - snRNA gene predicted gene, 25720
Mir1942 15 76215611 to 76215673 62 - miRNA gene microRNA 1942