Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:75676788-75986789

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Top1mt 15 75657035 to 75678800 21765 - protein coding gene DNA topoisomerase 1, mitochondrial
Cpgi7187 15 75678389 to 75678900 511 CpG island CpG island 7187
Tssr134866 15 75678732 to 75678805 73 - TSS region transcription start site region 134866
Tssr134867 15 75683681 to 75683686 5 - TSS region transcription start site region 134867
Cpgi7188 15 75703823 to 75704669 846 CpG island CpG island 7188
Tssr4631 15 75704264 to 75704291 27 + TSS region transcription start site region 4631
Rhpn1 15 75704285 to 75714419 10134 + protein coding gene rhophilin, Rho GTPase binding protein 1
Tssr131677 15 75704300 to 75704317 17 + TSS region transcription start site region 131677
Cpgi7189 15 75711899 to 75712598 699 CpG island CpG island 7189
Cpgi7190 15 75731482 to 75732152 670 CpG island CpG island 7190
Cpgi7191 15 75746077 to 75748824 2747 CpG island CpG island 7191
Mafa 15 75746843 to 75747922 1079 - protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian)
Tssr134868 15 75748207 to 75748239 32 - TSS region transcription start site region 134868
Tssr134869 15 75748318 to 75748322 4 - TSS region transcription start site region 134869
Zc3h3 15 75754430 to 75841915 87485 - protein coding gene zinc finger CCCH type containing 3
Gm23747 15 75759859 to 75759989 130 + snoRNA gene predicted gene, 23747
Tssr134870 15 75810516 to 75810527 11 - TSS region transcription start site region 134870
Tssr134871 15 75812912 to 75812922 10 - TSS region transcription start site region 134871
Tssr131678 15 75822205 to 75822213 8 + TSS region transcription start site region 131678
Tssr134872 15 75831788 to 75831789 1 - TSS region transcription start site region 134872
Cpgi7192 15 75841331 to 75842385 1054 CpG island CpG island 7192
Tssr134873 15 75841907 to 75841932 25 - TSS region transcription start site region 134873
Tssr134874 15 75841937 to 75841954 17 - TSS region transcription start site region 134874
Tssr131679 15 75842084 to 75842133 49 + TSS region transcription start site region 131679
Gm34851 15 75843505 to 75845170 1665 + lncRNA gene predicted gene, 34851
Gm46523 15 75845968 to 75847577 1609 + lncRNA gene predicted gene, 46523
Gm9568 15 75854819 to 75856228 1409 - pseudogene predicted gene 9568
Cpgi7193 15 75862132 to 75862486 354 CpG island CpG island 7193
Tssr131680 15 75862310 to 75862370 60 + TSS region transcription start site region 131680
Gsdmd 15 75862327 to 75867408 5081 + protein coding gene gasdermin D
Tssr131681 15 75863228 to 75863238 10 + TSS region transcription start site region 131681
Tssr131682 15 75863243 to 75863267 24 + TSS region transcription start site region 131682
Tssr131683 15 75863279 to 75863294 15 + TSS region transcription start site region 131683
Tssr131684 15 75863761 to 75863763 2 + TSS region transcription start site region 131684
Tssr131685 15 75866072 to 75866100 28 + TSS region transcription start site region 131685
Tssr131686 15 75867131 to 75867140 9 + TSS region transcription start site region 131686
Cpgi7194 15 75884022 to 75884459 437 CpG island CpG island 7194
Mroh6 15 75884137 to 75888770 4633 - protein coding gene maestro heat-like repeat family member 6
Cpgi7195 15 75885369 to 75886478 1109 CpG island CpG island 7195
Tssr131687 15 75886989 to 75887003 14 + TSS region transcription start site region 131687
Cpgi7196 15 75887623 to 75887957 334 CpG island CpG island 7196
Tssr134875 15 75888754 to 75888785 31 - TSS region transcription start site region 134875
Tssr131688 15 75889832 to 75889839 7 + TSS region transcription start site region 131688
Tssr131689 15 75890658 to 75890672 14 + TSS region transcription start site region 131689
Naprt 15 75890964 to 75894481 3517 - protein coding gene nicotinate phosphoribosyltransferase
Cpgi7197 15 75893550 to 75894622 1072 CpG island CpG island 7197
Tssr134876 15 75894232 to 75894322 90 - TSS region transcription start site region 134876
Tssr134877 15 75894474 to 75894529 55 - TSS region transcription start site region 134877
Tssr134878 15 75894538 to 75894549 11 - TSS region transcription start site region 134878
Eef1d 15 75894796 to 75909577 14781 - protein coding gene eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Tssr134879 15 75901495 to 75901513 18 - TSS region transcription start site region 134879
Tssr134880 15 75905349 to 75905388 39 - TSS region transcription start site region 134880
Tssr131690 15 75905465 to 75905474 9 + TSS region transcription start site region 131690
Cpgi7198 15 75908811 to 75911010 2199 CpG island CpG island 7198
Tssr134881 15 75909289 to 75909311 22 - TSS region transcription start site region 134881
Tssr134882 15 75909319 to 75909330 11 - TSS region transcription start site region 134882
Tssr134883 15 75909543 to 75909567 24 - TSS region transcription start site region 134883
Tssr134884 15 75909568 to 75909593 25 - TSS region transcription start site region 134884
Tigd5 15 75909735 to 75914535 4800 + protein coding gene tigger transposable element derived 5
Tssr131691 15 75909751 to 75909766 15 + TSS region transcription start site region 131691
Pycrl 15 75916477 to 75921560 5083 - protein coding gene pyrroline-5-carboxylate reductase-like
Cpgi7199 15 75921183 to 75921563 380 CpG island CpG island 7199
Tssr134885 15 75921226 to 75921274 48 - TSS region transcription start site region 134885
Tssr134886 15 75921463 to 75921533 70 - TSS region transcription start site region 134886
Tsta3 15 75924669 to 75929821 5152 - protein coding gene tissue specific transplantation antigen P35B
Tssr134887 15 75928646 to 75928688 42 - TSS region transcription start site region 134887
Cpgi7200 15 75929371 to 75929987 616 CpG island CpG island 7200
Tssr134888 15 75929698 to 75929719 21 - TSS region transcription start site region 134888
Tssr134889 15 75929733 to 75929772 39 - TSS region transcription start site region 134889
Tssr134890 15 75929781 to 75929792 11 - TSS region transcription start site region 134890
Cpgi7201 15 75940809 to 75941762 953 CpG island CpG island 7201
Zfp623 15 75940952 to 75949400 8448 + protein coding gene zinc finger protein 623
Tssr131692 15 75940993 to 75941015 22 + TSS region transcription start site region 131692
Tssr131693 15 75941024 to 75941091 67 + TSS region transcription start site region 131693
Eif2s3x-ps1 15 75967227 to 75968335 1108 - pseudogene eukaryotic translation initiation factor 2, subunit 3, pseudogene 1
Cpgi7202 15 75968940 to 75969787 847 CpG island CpG island 7202
Tssr131694 15 75969118 to 75969160 42 + TSS region transcription start site region 131694
Zfp707 15 75969127 to 75975865 6738 + protein coding gene zinc finger protein 707
Tssr131695 15 75969168 to 75969189 21 + TSS region transcription start site region 131695
Tssr131696 15 75969204 to 75969215 11 + TSS region transcription start site region 131696
Tssr131697 15 75969287 to 75969312 25 + TSS region transcription start site region 131697
Ccdc166 15 75979872 to 75982285 2413 - protein coding gene coiled-coil domain containing 166
Cpgi7203 15 75980920 to 75982482 1562 CpG island CpG island 7203
Tssr134891 15 75981823 to 75981838 15 - TSS region transcription start site region 134891
Tssr134892 15 75981944 to 75982000 56 - TSS region transcription start site region 134892
Tssr131698 15 75982038 to 75982061 23 + TSS region transcription start site region 131698