Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:7550328-8400407

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41264 15 7500373 to 7562384 62011 - lncRNA gene predicted gene, 41264
Gm49206 15 7575993 to 7576242 249 - pseudogene predicted gene, 49206
Gm37743 15 7669965 to 7670340 375 - unclassified gene predicted gene, 37743
Gm49207 15 7760714 to 7760992 278 + lincRNA gene predicted gene, 49207
Gm19227 15 7778948 to 7779481 533 + pseudogene predicted gene, 19227
Cpgi6926 15 7809916 to 7811505 1589 CpG island CpG island 6926
Tssr130579 15 7810041 to 7810056 15 + TSS region transcription start site region 130579
Gdnf 15 7810846 to 7837575 26729 + protein coding gene glial cell line derived neurotrophic factor
Cpgi6927 15 7812091 to 7812295 204 CpG island CpG island 6927
Cpgi6928 15 7812858 to 7814119 1261 CpG island CpG island 6928
Cpgi6929 15 7815142 to 7815958 816 CpG island CpG island 6929
D15Mit80 15 7865616 to 7865765 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 80
Wdr70 15 7873055 to 8099209 226154 - protein coding gene WD repeat domain 70
Tssr133646 15 7885199 to 7885242 43 - TSS region transcription start site region 133646
Gm7686 15 7889183 to 7894528 5345 + pseudogene predicted gene 7686
Tssr133647 15 7923593 to 7923595 2 - TSS region transcription start site region 133647
Tssr130580 15 7975034 to 7975048 14 + TSS region transcription start site region 130580
Rpl19-ps6 15 7975075 to 7975660 585 + pseudogene ribosomal protein L19, pseudogene 6
Gm27529 15 7975328 to 7975407 79 + miRNA gene predicted gene, 27529
Cpgi6930 15 8098790 to 8099429 639 CpG island CpG island 6930
Tssr133648 15 8099182 to 8099215 33 - TSS region transcription start site region 133648
Tssr130581 15 8103017 to 8103018 1 + TSS region transcription start site region 130581
Cpgi6931 15 8108967 to 8109696 729 CpG island CpG island 6931
Nup155 15 8109256 to 8159859 50603 + protein coding gene nucleoporin 155
Tssr130582 15 8109296 to 8109307 11 + TSS region transcription start site region 130582
Tssr130583 15 8109322 to 8109356 34 + TSS region transcription start site region 130583
Tssr130584 15 8109367 to 8109374 7 + TSS region transcription start site region 130584
Tssr130585 15 8109377 to 8109386 9 + TSS region transcription start site region 130585
Tssr130586 15 8112662 to 8112665 3 + TSS region transcription start site region 130586
Tssr130587 15 8113668 to 8113679 11 + TSS region transcription start site region 130587
Cpgi6932 15 8168739 to 8169459 720 CpG island CpG island 6932
Tssr130588 15 8169031 to 8169066 35 + TSS region transcription start site region 130588
Tssr130589 15 8169067 to 8169105 38 + TSS region transcription start site region 130589
Cplane1 15 8169106 to 8271158 102052 + protein coding gene ciliogenesis and planar polarity effector 1
Gm46494 15 8171978 to 8173524 1546 + pseudogene predicted gene, 46494
Gm24144 15 8220004 to 8220114 110 + snRNA gene predicted gene, 24144
Gm41265 15 8221454 to 8223111 1657 - lncRNA gene predicted gene, 41265
Tssr130590 15 8225260 to 8225268 8 + TSS region transcription start site region 130590
Nipbl 15 8290617 to 8444463 153846 - protein coding gene NIPBL cohesin loading factor
Tssr133649 15 8347471 to 8347476 5 - TSS region transcription start site region 133649
Tssr133650 15 8350315 to 8350336 21 - TSS region transcription start site region 133650
Tssr133651 15 8350421 to 8350440 19 - TSS region transcription start site region 133651
Tssr133652 15 8350473 to 8350488 15 - TSS region transcription start site region 133652
Tssr133653 15 8350876 to 8350890 14 - TSS region transcription start site region 133653
Tssr133654 15 8351402 to 8351415 13 - TSS region transcription start site region 133654
Tssr133655 15 8351533 to 8351551 18 - TSS region transcription start site region 133655
Tssr133656 15 8351635 to 8351668 33 - TSS region transcription start site region 133656
Tssr133657 15 8351696 to 8351712 16 - TSS region transcription start site region 133657
Tssr133658 15 8359256 to 8359273 17 - TSS region transcription start site region 133658
Tssr133659 15 8361751 to 8361768 17 - TSS region transcription start site region 133659
Tssr133660 15 8387078 to 8387081 3 - TSS region transcription start site region 133660
Tssr133661 15 8398018 to 8398021 3 - TSS region transcription start site region 133661