Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:74968240-75690355

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119 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ly6i 15 74979534 to 74983430 3896 - protein coding gene lymphocyte antigen 6 complex, locus I
Tssr134827 15 74983369 to 74983389 20 - TSS region transcription start site region 134827
Tssr134828 15 74983415 to 74983431 16 - TSS region transcription start site region 134828
Gm8000 15 74986591 to 74988460 1869 - pseudogene predicted gene 8000
Gm37042 15 74988750 to 74989330 580 + unclassified gene predicted gene, 37042
Tssr131646 15 74989222 to 74989255 33 + TSS region transcription start site region 131646
Tssr131647 15 74989582 to 74989594 12 + TSS region transcription start site region 131647
Tssr131648 15 74989612 to 74989623 11 + TSS region transcription start site region 131648
Gm41348 15 74991998 to 74994447 2449 - lncRNA gene predicted gene, 41348
Ly6a 15 74994877 to 74998031 3154 - protein coding gene lymphocyte antigen 6 complex, locus A
Tssr134829 15 74994936 to 74994947 11 - TSS region transcription start site region 134829
Tssr134830 15 74995091 to 74995112 21 - TSS region transcription start site region 134830
Tssr131649 15 74995391 to 74995397 6 + TSS region transcription start site region 131649
Tssr134831 15 74996492 to 74996529 37 - TSS region transcription start site region 134831
Gm28068 15 75007303 to 75024410 17107 + lincRNA gene predicted gene 28068
Tssr134832 15 75012922 to 75012931 9 - TSS region transcription start site region 134832
Gm28069 15 75025294 to 75025507 213 + pseudogene predicted gene 28069
Ly6c1 15 75044018 to 75048830 4812 - protein coding gene lymphocyte antigen 6 complex, locus C1
Tssr134833 15 75048807 to 75048844 37 - TSS region transcription start site region 134833
Tssr134834 15 75055286 to 75055290 4 - TSS region transcription start site region 134834
Tssr131650 15 75070782 to 75070796 14 + TSS region transcription start site region 131650
Tssr131651 15 75070803 to 75070814 11 + TSS region transcription start site region 131651
Gm5960 15 75071112 to 75074638 3526 + pseudogene predicted gene 5960
Gm28502 15 75076210 to 75079094 2884 - lincRNA gene predicted gene 28502
Cpgi7182 15 75086266 to 75087044 778 CpG island CpG island 7182
Tssr134835 15 75087035 to 75087049 14 - TSS region transcription start site region 134835
Ly6c2 15 75108158 to 75111970 3812 - protein coding gene lymphocyte antigen 6 complex, locus C2
Tssr134836 15 75111967 to 75111972 5 - TSS region transcription start site region 134836
Tssr4630 15 75116736 to 75116749 13 + TSS region transcription start site region 4630
Ly6a2 15 75131377 to 75135128 3751 - pseudogene lymphocyte antigen 6 complex, locus A2
Tssr134837 15 75135038 to 75135070 32 - TSS region transcription start site region 134837
Tssr134838 15 75135125 to 75135129 4 - TSS region transcription start site region 134838
Ly6g 15 75155261 to 75159128 3867 + protein coding gene lymphocyte antigen 6 complex, locus G
Tssr131652 15 75155307 to 75155329 22 + TSS region transcription start site region 131652
Gm28117 15 75193904 to 75197667 3763 - pseudogene predicted gene 28117
Tssr134839 15 75216165 to 75216180 15 - TSS region transcription start site region 134839
Tssr134840 15 75216187 to 75216198 11 - TSS region transcription start site region 134840
Tssr131653 15 75216244 to 75216254 10 + TSS region transcription start site region 131653
Tssr131654 15 75216354 to 75216392 38 + TSS region transcription start site region 131654
Ly6g2 15 75216376 to 75222661 6285 + protein coding gene lymphocyte antigen 6 complex, locus G2
Tssr131655 15 75216676 to 75216692 16 + TSS region transcription start site region 131655
Tssr131656 15 75222537 to 75222548 11 + TSS region transcription start site region 131656
Gm10238 15 75235597 to 75238768 3171 - pseudogene predicted pseudogene 10238
Tssr134841 15 75239072 to 75239089 17 - TSS region transcription start site region 134841
Gm28115 15 75245146 to 75247357 2211 - pseudogene predicted gene 28115
Tssr131657 15 75268379 to 75268402 23 + TSS region transcription start site region 131657
Ly6f 15 75268421 to 75272235 3814 + protein coding gene lymphocyte antigen 6 complex, locus F
Gm28116 15 75293950 to 75297099 3149 - pseudogene predicted gene 28116
Gm3454 15 75311377 to 75314964 3587 - pseudogene predicted gene 3454
Tssr134842 15 75315245 to 75315272 27 - TSS region transcription start site region 134842
Gm28113 15 75326500 to 75326728 228 - pseudogene predicted gene 28113
Gm29517 15 75328240 to 75330355 2115 + pseudogene predicted gene 29517
Gm28114 15 75349006 to 75351181 2175 - pseudogene predicted gene 28114
Tssr134843 15 75352123 to 75352126 3 - TSS region transcription start site region 134843
Gm3142 15 75372463 to 75377269 4806 - pseudogene predicted gene 3142
9030619P08Rik 15 75427606 to 75431829 4223 - pseudogene RIKEN cDNA 9030619P08 gene
Tssr134844 15 75431745 to 75431774 29 - TSS region transcription start site region 134844
Pain1 15 75448997 to 90928982 15479985 QTL pain 1
Ly6l 15 75449457 to 75451406 1949 + protein coding gene lymphocyte antigen 6 complex, locus L
D15Mit117 15 75474286 to 75474431 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 117
Tssr131658 15 75474470 to 75474477 7 + TSS region transcription start site region 131658
Tssr131659 15 75474486 to 75474495 9 + TSS region transcription start site region 131659
Tssr131660 15 75474501 to 75474532 31 + TSS region transcription start site region 131660
Gm34531 15 75474546 to 75476466 1920 + lncRNA gene predicted gene, 34531
Tssr131661 15 75498718 to 75498725 7 + TSS region transcription start site region 131661
Tssr131662 15 75498737 to 75498759 22 + TSS region transcription start site region 131662
Gm34593 15 75498774 to 75500720 1946 + lncRNA gene predicted gene, 34593
Gm34646 15 75517209 to 75519657 2448 + lncRNA gene predicted gene, 34646
Tssr131663 15 75517259 to 75517273 14 + TSS region transcription start site region 131663
Ly6h 15 75564745 to 75567249 2504 - protein coding gene lymphocyte antigen 6 complex, locus H
Cpgi7183 15 75565518 to 75567519 2001 CpG island CpG island 7183
Tssr134845 15 75566264 to 75566276 12 - TSS region transcription start site region 134845
Tssr134846 15 75566310 to 75566354 44 - TSS region transcription start site region 134846
Tssr134847 15 75566552 to 75566567 15 - TSS region transcription start site region 134847
Tssr134848 15 75566568 to 75566604 36 - TSS region transcription start site region 134848
Tssr134849 15 75566608 to 75566658 50 - TSS region transcription start site region 134849
Tssr134850 15 75566811 to 75566896 85 - TSS region transcription start site region 134850
Tssr134851 15 75566897 to 75566909 12 - TSS region transcription start site region 134851
Tssr134852 15 75566911 to 75566919 8 - TSS region transcription start site region 134852
Tssr134853 15 75567015 to 75567053 38 - TSS region transcription start site region 134853
Tssr134854 15 75567164 to 75567175 11 - TSS region transcription start site region 134854
Tssr134855 15 75567176 to 75567259 83 - TSS region transcription start site region 134855
Tssr134856 15 75567279 to 75567280 1 - TSS region transcription start site region 134856
Tssr134857 15 75567651 to 75567700 49 - TSS region transcription start site region 134857
Tssr131664 15 75596624 to 75596643 19 + TSS region transcription start site region 131664
Gpihbp1 15 75596635 to 75598213 1578 + protein coding gene GPI-anchored HDL-binding protein 1
Tssr131665 15 75596645 to 75596662 17 + TSS region transcription start site region 131665
Tssr134858 15 75603921 to 75603922 1 - TSS region transcription start site region 134858
Tssr131666 15 75615117 to 75615130 13 + TSS region transcription start site region 131666
Tssr131667 15 75615160 to 75615166 6 + TSS region transcription start site region 131667
Cpgi7184 15 75615964 to 75617210 1246 CpG island CpG island 7184
Zfp41 15 75616142 to 75625477 9335 + protein coding gene zinc finger protein 41
Tssr134859 15 75616403 to 75616445 42 - TSS region transcription start site region 134859
Tssr131668 15 75616675 to 75616729 54 + TSS region transcription start site region 131668
Tssr131669 15 75616732 to 75616787 55 + TSS region transcription start site region 131669
Tssr131670 15 75626265 to 75626311 46 + TSS region transcription start site region 131670
Gm46519 15 75631965 to 75634377 2412 - lincRNA gene predicted gene, 46519
Tssr131671 15 75632276 to 75632306 30 + TSS region transcription start site region 131671
Tssr134860 15 75633827 to 75633846 19 - TSS region transcription start site region 134860
Tssr131672 15 75634212 to 75634221 9 + TSS region transcription start site region 131672
Tssr131673 15 75634240 to 75634262 22 + TSS region transcription start site region 131673
Gm38506 15 75634629 to 75644020 9391 + lncRNA gene predicted gene, 38506
Tssr131674 15 75641876 to 75641897 21 + TSS region transcription start site region 131674
Cpgi7185 15 75642130 to 75642712 582 CpG island CpG island 7185
Tssr131675 15 75642452 to 75642496 44 + TSS region transcription start site region 131675
Tssr131676 15 75642534 to 75642545 11 + TSS region transcription start site region 131676
2810039B14Rik 15 75644977 to 75647437 2460 + pseudogene RIKEN cDNA 2810039B14 gene
Cpgi7186 15 75646334 to 75647059 725 CpG island CpG island 7186
Gm46518 15 75651934 to 75655560 3626 - lncRNA gene predicted gene, 46518
Top1mt 15 75657035 to 75678800 21765 - protein coding gene DNA topoisomerase 1, mitochondrial
Gm15945 15 75661407 to 75663529 2122 + antisense lncRNA gene predicted gene 15945
Tssr134861 15 75664082 to 75664091 9 - TSS region transcription start site region 134861
Tssr134862 15 75664099 to 75664141 42 - TSS region transcription start site region 134862
Tssr134863 15 75664144 to 75664166 22 - TSS region transcription start site region 134863
Tssr134864 15 75664168 to 75664175 7 - TSS region transcription start site region 134864
Tssr134865 15 75664183 to 75664190 7 - TSS region transcription start site region 134865
Cpgi7187 15 75678389 to 75678900 511 CpG island CpG island 7187
Tssr134866 15 75678732 to 75678805 73 - TSS region transcription start site region 134866
Tssr134867 15 75683681 to 75683686 5 - TSS region transcription start site region 134867