Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:74939212-76329221

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480 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29126 15 74953330 to 74953480 150 - pseudogene predicted gene 29126
Tssr134814 15 74954058 to 74954066 8 - TSS region transcription start site region 134814
Tssr131610 15 74954189 to 74954197 8 + TSS region transcription start site region 131610
Ly6e 15 74955051 to 74959905 4854 + protein coding gene lymphocyte antigen 6 complex, locus E
Cpgi7180 15 74955252 to 74955914 662 CpG island CpG island 7180
Tssr134815 15 74955496 to 74955507 11 - TSS region transcription start site region 134815
Tssr134816 15 74955515 to 74955541 26 - TSS region transcription start site region 134816
Tssr131611 15 74955611 to 74955629 18 + TSS region transcription start site region 131611
Tssr131612 15 74955640 to 74955660 20 + TSS region transcription start site region 131612
Tssr131613 15 74955906 to 74955921 15 + TSS region transcription start site region 131613
Tssr131614 15 74956423 to 74956481 58 + TSS region transcription start site region 131614
Tssr131615 15 74957118 to 74957144 26 + TSS region transcription start site region 131615
Tssr131616 15 74957150 to 74957160 10 + TSS region transcription start site region 131616
Tssr131617 15 74957163 to 74957178 15 + TSS region transcription start site region 131617
Tssr131618 15 74957180 to 74957209 29 + TSS region transcription start site region 131618
Tssr131619 15 74957216 to 74957227 11 + TSS region transcription start site region 131619
Tssr131620 15 74957231 to 74957246 15 + TSS region transcription start site region 131620
Tssr131621 15 74957247 to 74957263 16 + TSS region transcription start site region 131621
Tssr131622 15 74957469 to 74957474 5 + TSS region transcription start site region 131622
Tssr131623 15 74957489 to 74957507 18 + TSS region transcription start site region 131623
Tssr131624 15 74957572 to 74957576 4 + TSS region transcription start site region 131624
Tssr131625 15 74957745 to 74957756 11 + TSS region transcription start site region 131625
Tssr131626 15 74957760 to 74957795 35 + TSS region transcription start site region 131626
Tssr131627 15 74957797 to 74957822 25 + TSS region transcription start site region 131627
Tssr131628 15 74958186 to 74958197 11 + TSS region transcription start site region 131628
Tssr131629 15 74958258 to 74958370 112 + TSS region transcription start site region 131629
Tssr131630 15 74958484 to 74958517 33 + TSS region transcription start site region 131630
Tssr131631 15 74958521 to 74958534 13 + TSS region transcription start site region 131631
Tssr131632 15 74958594 to 74958605 11 + TSS region transcription start site region 131632
Tssr134817 15 74958612 to 74958626 14 - TSS region transcription start site region 134817
Tssr131633 15 74958633 to 74958654 21 + TSS region transcription start site region 131633
Tssr131634 15 74958656 to 74958685 29 + TSS region transcription start site region 131634
Tssr134818 15 74958698 to 74958730 32 - TSS region transcription start site region 134818
Tssr131635 15 74958719 to 74958747 28 + TSS region transcription start site region 131635
Tssr134819 15 74958736 to 74958756 20 - TSS region transcription start site region 134819
Tssr134820 15 74958764 to 74958792 28 - TSS region transcription start site region 134820
Tssr131636 15 74958805 to 74958833 28 + TSS region transcription start site region 131636
Tssr134821 15 74958821 to 74958839 18 - TSS region transcription start site region 134821
Tssr131637 15 74958842 to 74958854 12 + TSS region transcription start site region 131637
Tssr134822 15 74958847 to 74958878 31 - TSS region transcription start site region 134822
Tssr131638 15 74958889 to 74958900 11 + TSS region transcription start site region 131638
Tssr134823 15 74958898 to 74958909 11 - TSS region transcription start site region 134823
Tssr131639 15 74958907 to 74958919 12 + TSS region transcription start site region 131639
Tssr134824 15 74958921 to 74958956 35 - TSS region transcription start site region 134824
Tssr131640 15 74958946 to 74958958 12 + TSS region transcription start site region 131640
Tssr131641 15 74959091 to 74959102 11 + TSS region transcription start site region 131641
Tssr131642 15 74959103 to 74959114 11 + TSS region transcription start site region 131642
Tssr131643 15 74959121 to 74959166 45 + TSS region transcription start site region 131643
Tssr134825 15 74959199 to 74959218 19 - TSS region transcription start site region 134825
Tssr131644 15 74959205 to 74959214 9 + TSS region transcription start site region 131644
Tssr131645 15 74959223 to 74959233 10 + TSS region transcription start site region 131645
Tssr134826 15 74959308 to 74959333 25 - TSS region transcription start site region 134826
Ly6i 15 74979534 to 74983430 3896 - protein coding gene lymphocyte antigen 6 complex, locus I
Tssr134827 15 74983369 to 74983389 20 - TSS region transcription start site region 134827
Tssr134828 15 74983415 to 74983431 16 - TSS region transcription start site region 134828
Gm8000 15 74986591 to 74988460 1869 - pseudogene predicted gene 8000
Gm37042 15 74988750 to 74989330 580 + unclassified gene predicted gene, 37042
Tssr131646 15 74989222 to 74989255 33 + TSS region transcription start site region 131646
Tssr131647 15 74989582 to 74989594 12 + TSS region transcription start site region 131647
Tssr131648 15 74989612 to 74989623 11 + TSS region transcription start site region 131648
Gm41348 15 74991998 to 74994447 2449 - lncRNA gene predicted gene, 41348
Ly6a 15 74994877 to 74998031 3154 - protein coding gene lymphocyte antigen 6 complex, locus A
Tssr134829 15 74994936 to 74994947 11 - TSS region transcription start site region 134829
Tssr134830 15 74995091 to 74995112 21 - TSS region transcription start site region 134830
Tssr131649 15 74995391 to 74995397 6 + TSS region transcription start site region 131649
Tssr134831 15 74996492 to 74996529 37 - TSS region transcription start site region 134831
Gm28068 15 75007303 to 75024410 17107 + lincRNA gene predicted gene 28068
Tssr134832 15 75012922 to 75012931 9 - TSS region transcription start site region 134832
Gm28069 15 75025294 to 75025507 213 + pseudogene predicted gene 28069
Ly6c1 15 75044018 to 75048830 4812 - protein coding gene lymphocyte antigen 6 complex, locus C1
Tssr134833 15 75048807 to 75048844 37 - TSS region transcription start site region 134833
Tssr134834 15 75055286 to 75055290 4 - TSS region transcription start site region 134834
Tssr131650 15 75070782 to 75070796 14 + TSS region transcription start site region 131650
Tssr131651 15 75070803 to 75070814 11 + TSS region transcription start site region 131651
Gm5960 15 75071112 to 75074638 3526 + pseudogene predicted gene 5960
Gm28502 15 75076210 to 75079094 2884 - lincRNA gene predicted gene 28502
Cpgi7182 15 75086266 to 75087044 778 CpG island CpG island 7182
Tssr134835 15 75087035 to 75087049 14 - TSS region transcription start site region 134835
Ly6c2 15 75108158 to 75111970 3812 - protein coding gene lymphocyte antigen 6 complex, locus C2
Tssr134836 15 75111967 to 75111972 5 - TSS region transcription start site region 134836
Tssr4630 15 75116736 to 75116749 13 + TSS region transcription start site region 4630
Ly6a2 15 75131377 to 75135128 3751 - pseudogene lymphocyte antigen 6 complex, locus A2
Tssr134837 15 75135038 to 75135070 32 - TSS region transcription start site region 134837
Tssr134838 15 75135125 to 75135129 4 - TSS region transcription start site region 134838
Ly6g 15 75155261 to 75159128 3867 + protein coding gene lymphocyte antigen 6 complex, locus G
Tssr131652 15 75155307 to 75155329 22 + TSS region transcription start site region 131652
Gm28117 15 75193904 to 75197667 3763 - pseudogene predicted gene 28117
Tssr134839 15 75216165 to 75216180 15 - TSS region transcription start site region 134839
Tssr134840 15 75216187 to 75216198 11 - TSS region transcription start site region 134840
Tssr131653 15 75216244 to 75216254 10 + TSS region transcription start site region 131653
Tssr131654 15 75216354 to 75216392 38 + TSS region transcription start site region 131654
Ly6g2 15 75216376 to 75222661 6285 + protein coding gene lymphocyte antigen 6 complex, locus G2
Tssr131655 15 75216676 to 75216692 16 + TSS region transcription start site region 131655
Tssr131656 15 75222537 to 75222548 11 + TSS region transcription start site region 131656
Gm10238 15 75235597 to 75238768 3171 - pseudogene predicted pseudogene 10238
Tssr134841 15 75239072 to 75239089 17 - TSS region transcription start site region 134841
Gm28115 15 75245146 to 75247357 2211 - pseudogene predicted gene 28115
Tssr131657 15 75268379 to 75268402 23 + TSS region transcription start site region 131657
Ly6f 15 75268421 to 75272235 3814 + protein coding gene lymphocyte antigen 6 complex, locus F
Gm28116 15 75293950 to 75297099 3149 - pseudogene predicted gene 28116
Gm3454 15 75311377 to 75314964 3587 - pseudogene predicted gene 3454
Tssr134842 15 75315245 to 75315272 27 - TSS region transcription start site region 134842
Gm28113 15 75326500 to 75326728 228 - pseudogene predicted gene 28113
Gm29517 15 75328240 to 75330355 2115 + pseudogene predicted gene 29517
Gm28114 15 75349006 to 75351181 2175 - pseudogene predicted gene 28114
Tssr134843 15 75352123 to 75352126 3 - TSS region transcription start site region 134843
Gm3142 15 75372463 to 75377269 4806 - pseudogene predicted gene 3142
9030619P08Rik 15 75427606 to 75431829 4223 - pseudogene RIKEN cDNA 9030619P08 gene
Tssr134844 15 75431745 to 75431774 29 - TSS region transcription start site region 134844
Pain1 15 75448997 to 90928982 15479985 QTL pain 1
Ly6l 15 75449457 to 75451406 1949 + protein coding gene lymphocyte antigen 6 complex, locus L
D15Mit117 15 75474286 to 75474431 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 117
Tssr131658 15 75474470 to 75474477 7 + TSS region transcription start site region 131658
Tssr131659 15 75474486 to 75474495 9 + TSS region transcription start site region 131659
Tssr131660 15 75474501 to 75474532 31 + TSS region transcription start site region 131660
Gm34531 15 75474546 to 75476466 1920 + lncRNA gene predicted gene, 34531
Tssr131661 15 75498718 to 75498725 7 + TSS region transcription start site region 131661
Tssr131662 15 75498737 to 75498759 22 + TSS region transcription start site region 131662
Gm34593 15 75498774 to 75500720 1946 + lncRNA gene predicted gene, 34593
Gm34646 15 75517209 to 75519657 2448 + lncRNA gene predicted gene, 34646
Tssr131663 15 75517259 to 75517273 14 + TSS region transcription start site region 131663
Ly6h 15 75564745 to 75567249 2504 - protein coding gene lymphocyte antigen 6 complex, locus H
Cpgi7183 15 75565518 to 75567519 2001 CpG island CpG island 7183
Tssr134845 15 75566264 to 75566276 12 - TSS region transcription start site region 134845
Tssr134846 15 75566310 to 75566354 44 - TSS region transcription start site region 134846
Tssr134847 15 75566552 to 75566567 15 - TSS region transcription start site region 134847
Tssr134848 15 75566568 to 75566604 36 - TSS region transcription start site region 134848
Tssr134849 15 75566608 to 75566658 50 - TSS region transcription start site region 134849
Tssr134850 15 75566811 to 75566896 85 - TSS region transcription start site region 134850
Tssr134851 15 75566897 to 75566909 12 - TSS region transcription start site region 134851
Tssr134852 15 75566911 to 75566919 8 - TSS region transcription start site region 134852
Tssr134853 15 75567015 to 75567053 38 - TSS region transcription start site region 134853
Tssr134854 15 75567164 to 75567175 11 - TSS region transcription start site region 134854
Tssr134855 15 75567176 to 75567259 83 - TSS region transcription start site region 134855
Tssr134856 15 75567279 to 75567280 1 - TSS region transcription start site region 134856
Tssr134857 15 75567651 to 75567700 49 - TSS region transcription start site region 134857
Tssr131664 15 75596624 to 75596643 19 + TSS region transcription start site region 131664
Gpihbp1 15 75596635 to 75598213 1578 + protein coding gene GPI-anchored HDL-binding protein 1
Tssr131665 15 75596645 to 75596662 17 + TSS region transcription start site region 131665
Tssr134858 15 75603921 to 75603922 1 - TSS region transcription start site region 134858
Tssr131666 15 75615117 to 75615130 13 + TSS region transcription start site region 131666
Tssr131667 15 75615160 to 75615166 6 + TSS region transcription start site region 131667
Cpgi7184 15 75615964 to 75617210 1246 CpG island CpG island 7184
Zfp41 15 75616142 to 75625477 9335 + protein coding gene zinc finger protein 41
Tssr134859 15 75616403 to 75616445 42 - TSS region transcription start site region 134859
Tssr131668 15 75616675 to 75616729 54 + TSS region transcription start site region 131668
Tssr131669 15 75616732 to 75616787 55 + TSS region transcription start site region 131669
Tssr131670 15 75626265 to 75626311 46 + TSS region transcription start site region 131670
Gm46519 15 75631965 to 75634377 2412 - lincRNA gene predicted gene, 46519
Tssr131671 15 75632276 to 75632306 30 + TSS region transcription start site region 131671
Tssr134860 15 75633827 to 75633846 19 - TSS region transcription start site region 134860
Tssr131672 15 75634212 to 75634221 9 + TSS region transcription start site region 131672
Tssr131673 15 75634240 to 75634262 22 + TSS region transcription start site region 131673
Gm38506 15 75634629 to 75644020 9391 + lncRNA gene predicted gene, 38506
Tssr131674 15 75641876 to 75641897 21 + TSS region transcription start site region 131674
Cpgi7185 15 75642130 to 75642712 582 CpG island CpG island 7185
Tssr131675 15 75642452 to 75642496 44 + TSS region transcription start site region 131675
Tssr131676 15 75642534 to 75642545 11 + TSS region transcription start site region 131676
2810039B14Rik 15 75644977 to 75647437 2460 + pseudogene RIKEN cDNA 2810039B14 gene
Cpgi7186 15 75646334 to 75647059 725 CpG island CpG island 7186
Gm46518 15 75651934 to 75655560 3626 - lncRNA gene predicted gene, 46518
Top1mt 15 75657035 to 75678800 21765 - protein coding gene DNA topoisomerase 1, mitochondrial
Gm15945 15 75661407 to 75663529 2122 + antisense lncRNA gene predicted gene 15945
Tssr134861 15 75664082 to 75664091 9 - TSS region transcription start site region 134861
Tssr134862 15 75664099 to 75664141 42 - TSS region transcription start site region 134862
Tssr134863 15 75664144 to 75664166 22 - TSS region transcription start site region 134863
Tssr134864 15 75664168 to 75664175 7 - TSS region transcription start site region 134864
Tssr134865 15 75664183 to 75664190 7 - TSS region transcription start site region 134865
Cpgi7187 15 75678389 to 75678900 511 CpG island CpG island 7187
Tssr134866 15 75678732 to 75678805 73 - TSS region transcription start site region 134866
Tssr134867 15 75683681 to 75683686 5 - TSS region transcription start site region 134867
Cpgi7188 15 75703823 to 75704669 846 CpG island CpG island 7188
Tssr4631 15 75704264 to 75704291 27 + TSS region transcription start site region 4631
Rhpn1 15 75704285 to 75714419 10134 + protein coding gene rhophilin, Rho GTPase binding protein 1
Tssr131677 15 75704300 to 75704317 17 + TSS region transcription start site region 131677
Cpgi7189 15 75711899 to 75712598 699 CpG island CpG island 7189
Cpgi7190 15 75731482 to 75732152 670 CpG island CpG island 7190
Cpgi7191 15 75746077 to 75748824 2747 CpG island CpG island 7191
Mafa 15 75746843 to 75747922 1079 - protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian)
Tssr134868 15 75748207 to 75748239 32 - TSS region transcription start site region 134868
Tssr134869 15 75748318 to 75748322 4 - TSS region transcription start site region 134869
Zc3h3 15 75754430 to 75841915 87485 - protein coding gene zinc finger CCCH type containing 3
Gm23747 15 75759859 to 75759989 130 + snoRNA gene predicted gene, 23747
Tssr134870 15 75810516 to 75810527 11 - TSS region transcription start site region 134870
Tssr134871 15 75812912 to 75812922 10 - TSS region transcription start site region 134871
Tssr131678 15 75822205 to 75822213 8 + TSS region transcription start site region 131678
Tssr134872 15 75831788 to 75831789 1 - TSS region transcription start site region 134872
Cpgi7192 15 75841331 to 75842385 1054 CpG island CpG island 7192
Tssr134873 15 75841907 to 75841932 25 - TSS region transcription start site region 134873
Tssr134874 15 75841937 to 75841954 17 - TSS region transcription start site region 134874
Tssr131679 15 75842084 to 75842133 49 + TSS region transcription start site region 131679
Gm34851 15 75843505 to 75845170 1665 + lncRNA gene predicted gene, 34851
Gm46523 15 75845968 to 75847577 1609 + lncRNA gene predicted gene, 46523
Gm9568 15 75854819 to 75856228 1409 - pseudogene predicted gene 9568
Cpgi7193 15 75862132 to 75862486 354 CpG island CpG island 7193
Tssr131680 15 75862310 to 75862370 60 + TSS region transcription start site region 131680
Gsdmd 15 75862327 to 75867408 5081 + protein coding gene gasdermin D
Tssr131681 15 75863228 to 75863238 10 + TSS region transcription start site region 131681
Tssr131682 15 75863243 to 75863267 24 + TSS region transcription start site region 131682
Tssr131683 15 75863279 to 75863294 15 + TSS region transcription start site region 131683