Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:73232834-73742860

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptk2 15 73205102 to 73423275 218173 - protein coding gene PTK2 protein tyrosine kinase 2
Tssr134689 15 73243006 to 73243037 31 - TSS region transcription start site region 134689
1700085D07Rik 15 73249546 to 73264120 14574 + antisense lncRNA gene RIKEN cDNA 1700085D07 gene
Mir151 15 73254815 to 73254882 67 - miRNA gene microRNA 151
Tssr134690 15 73268367 to 73268370 3 - TSS region transcription start site region 134690
Tssr134691 15 73268491 to 73268528 37 - TSS region transcription start site region 134691
Tssr134692 15 73284761 to 73284771 10 - TSS region transcription start site region 134692
Tssr134693 15 73296670 to 73296692 22 - TSS region transcription start site region 134693
Tssr134694 15 73296711 to 73296724 13 - TSS region transcription start site region 134694
Tssr134695 15 73311064 to 73311066 2 - TSS region transcription start site region 134695
Gm41344 15 73318363 to 73325120 6757 + lncRNA gene predicted gene, 41344
Gm24787 15 73349799 to 73349921 122 + snoRNA gene predicted gene, 24787
Tssr134696 15 73360435 to 73360451 16 - TSS region transcription start site region 134696
Tssr134697 15 73363783 to 73363788 5 - TSS region transcription start site region 134697
C130079B09Rik 15 73400762 to 73403173 2411 unclassified gene RIKEN cDNA C130079B09 gene
Gm7908 15 73407492 to 73408238 746 - pseudogene predicted gene 7908
Cpgi7162 15 73422510 to 73423848 1338 CpG island CpG island 7162
Tssr134698 15 73423035 to 73423055 20 - TSS region transcription start site region 134698
Tssr134699 15 73423077 to 73423179 102 - TSS region transcription start site region 134699
Tssr134700 15 73423180 to 73423218 38 - TSS region transcription start site region 134700
Tssr134701 15 73423226 to 73423239 13 - TSS region transcription start site region 134701
Tssr131528 15 73423281 to 73423326 45 + TSS region transcription start site region 131528
Gm49066 15 73423311 to 73424109 798 + bidirectional promoter lncRNA gene predicted gene, 49066
Gm10362 15 73428359 to 73428910 551 - pseudogene predicted gene 10362
Tssr134702 15 73487268 to 73487278 10 - TSS region transcription start site region 134702
Tssr134703 15 73487308 to 73487318 10 - TSS region transcription start site region 134703
Tssr134704 15 73487323 to 73487333 10 - TSS region transcription start site region 134704
Tssr134705 15 73487335 to 73487342 7 - TSS region transcription start site region 134705
Tssr4621 15 73487822 to 73487831 9 + TSS region transcription start site region 4621
Tssr131529 15 73487834 to 73487860 26 + TSS region transcription start site region 131529
Tssr4622 15 73487884 to 73487894 10 + TSS region transcription start site region 4622
Gm19811 15 73497038 to 73497297 259 - pseudogene predicted gene, 19811
Cpgi7163 15 73512222 to 73513213 991 CpG island CpG island 7163
Tssr131530 15 73512559 to 73512607 48 + TSS region transcription start site region 131530
Dennd3 15 73512560 to 73572242 59682 + protein coding gene DENN/MADD domain containing 3
Tssr131531 15 73512614 to 73512640 26 + TSS region transcription start site region 131531
Tssr131532 15 73512644 to 73512690 46 + TSS region transcription start site region 131532
Tssr131533 15 73512693 to 73512705 12 + TSS region transcription start site region 131533
Tssr131534 15 73518567 to 73518615 48 + TSS region transcription start site region 131534
Tssr131535 15 73558391 to 73558395 4 + TSS region transcription start site region 131535
Slc45a4 15 73577424 to 73645762 68338 - protein coding gene solute carrier family 45, member 4
Tssr134706 15 73622046 to 73622050 4 - TSS region transcription start site region 134706
Tssr134707 15 73643255 to 73643260 5 - TSS region transcription start site region 134707
Cpgi7164 15 73644783 to 73646331 1548 CpG island CpG island 7164
Tssr134708 15 73645665 to 73645750 85 - TSS region transcription start site region 134708
1700010B13Rik 15 73645852 to 73652347 6495 + unclassified non-coding RNA gene RIKEN cDNA 1700010B13 gene
Tssr134709 15 73676443 to 73676461 18 - TSS region transcription start site region 134709
Tssr131536 15 73676661 to 73676675 14 + TSS region transcription start site region 131536
Tssr134710 15 73677338 to 73677355 17 - TSS region transcription start site region 134710
Gpr20 15 73694604 to 73707505 12901 - protein coding gene G protein-coupled receptor 20
Tssr134711 15 73707387 to 73707414 27 - TSS region transcription start site region 134711
Tssr131537 15 73723124 to 73723129 5 + TSS region transcription start site region 131537
Tssr131538 15 73723131 to 73723151 20 + TSS region transcription start site region 131538
Ptp4a3 15 73723145 to 73758766 35621 + protein coding gene protein tyrosine phosphatase 4a3
Tssr4623 15 73723156 to 73723159 3 + TSS region transcription start site region 4623
Tssr131539 15 73723164 to 73723174 10 + TSS region transcription start site region 131539
Cpgi7165 15 73724206 to 73725550 1344 CpG island CpG island 7165
Tssr131540 15 73724754 to 73724826 72 + TSS region transcription start site region 131540
Tssr131541 15 73727690 to 73727714 24 + TSS region transcription start site region 131541
Tssr131542 15 73729148 to 73729167 19 + TSS region transcription start site region 131542
Gm22106 15 73729164 to 73729290 126 + snRNA gene predicted gene, 22106
Tssr134712 15 73735071 to 73735127 56 - TSS region transcription start site region 134712
Tssr131543 15 73742856 to 73742859 3 + TSS region transcription start site region 131543