Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:73181971-74322009

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115 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ago2 15 73101625 to 73184947 83322 - protein coding gene argonaute RISC catalytic subunit 2
Tssr131527 15 73182662 to 73182671 9 + TSS region transcription start site region 131527
Cpgi7161 15 73183784 to 73185744 1960 CpG island CpG island 7161
Tssr134684 15 73184863 to 73184971 108 - TSS region transcription start site region 134684
Tssr134685 15 73185245 to 73185256 11 - TSS region transcription start site region 134685
Tssr134686 15 73185270 to 73185283 13 - TSS region transcription start site region 134686
Tssr134687 15 73185302 to 73185317 15 - TSS region transcription start site region 134687
Tssr134688 15 73185321 to 73185351 30 - TSS region transcription start site region 134688
Ptk2 15 73205102 to 73423275 218173 - protein coding gene PTK2 protein tyrosine kinase 2
8030476L19Rik 15 73227003 to 73228095 1092 unclassified gene RIKEN cDNA 8030476L19 gene
Tssr134689 15 73243006 to 73243037 31 - TSS region transcription start site region 134689
1700085D07Rik 15 73249546 to 73264120 14574 + antisense lncRNA gene RIKEN cDNA 1700085D07 gene
Mir151 15 73254815 to 73254882 67 - miRNA gene microRNA 151
Tssr134690 15 73268367 to 73268370 3 - TSS region transcription start site region 134690
Tssr134691 15 73268491 to 73268528 37 - TSS region transcription start site region 134691
Tssr134692 15 73284761 to 73284771 10 - TSS region transcription start site region 134692
Tssr134693 15 73296670 to 73296692 22 - TSS region transcription start site region 134693
Tssr134694 15 73296711 to 73296724 13 - TSS region transcription start site region 134694
Tssr134695 15 73311064 to 73311066 2 - TSS region transcription start site region 134695
Gm41344 15 73318363 to 73325120 6757 + lncRNA gene predicted gene, 41344
Gm24787 15 73349799 to 73349921 122 + snoRNA gene predicted gene, 24787
Tssr134696 15 73360435 to 73360451 16 - TSS region transcription start site region 134696
Tssr134697 15 73363783 to 73363788 5 - TSS region transcription start site region 134697
C130079B09Rik 15 73400762 to 73403173 2411 unclassified gene RIKEN cDNA C130079B09 gene
Gm7908 15 73407492 to 73408238 746 - pseudogene predicted gene 7908
Cpgi7162 15 73422510 to 73423848 1338 CpG island CpG island 7162
Tssr134698 15 73423035 to 73423055 20 - TSS region transcription start site region 134698
Tssr134699 15 73423077 to 73423179 102 - TSS region transcription start site region 134699
Tssr134700 15 73423180 to 73423218 38 - TSS region transcription start site region 134700
Tssr134701 15 73423226 to 73423239 13 - TSS region transcription start site region 134701
Tssr131528 15 73423281 to 73423326 45 + TSS region transcription start site region 131528
Gm49066 15 73423311 to 73424109 798 + bidirectional promoter lncRNA gene predicted gene, 49066
Gm10362 15 73428359 to 73428910 551 - pseudogene predicted gene 10362
Tssr134702 15 73487268 to 73487278 10 - TSS region transcription start site region 134702
Tssr134703 15 73487308 to 73487318 10 - TSS region transcription start site region 134703
Tssr134704 15 73487323 to 73487333 10 - TSS region transcription start site region 134704
Tssr134705 15 73487335 to 73487342 7 - TSS region transcription start site region 134705
Tssr4621 15 73487822 to 73487831 9 + TSS region transcription start site region 4621
Tssr131529 15 73487834 to 73487860 26 + TSS region transcription start site region 131529
Tssr4622 15 73487884 to 73487894 10 + TSS region transcription start site region 4622
Gm19811 15 73497038 to 73497297 259 - pseudogene predicted gene, 19811
Cpgi7163 15 73512222 to 73513213 991 CpG island CpG island 7163
Tssr131530 15 73512559 to 73512607 48 + TSS region transcription start site region 131530
Dennd3 15 73512560 to 73572242 59682 + protein coding gene DENN/MADD domain containing 3
Tssr131531 15 73512614 to 73512640 26 + TSS region transcription start site region 131531
Tssr131532 15 73512644 to 73512690 46 + TSS region transcription start site region 131532
Tssr131533 15 73512693 to 73512705 12 + TSS region transcription start site region 131533
Tssr131534 15 73518567 to 73518615 48 + TSS region transcription start site region 131534
Tssr131535 15 73558391 to 73558395 4 + TSS region transcription start site region 131535
Slc45a4 15 73577424 to 73645762 68338 - protein coding gene solute carrier family 45, member 4
Tssr134706 15 73622046 to 73622050 4 - TSS region transcription start site region 134706
Tssr134707 15 73643255 to 73643260 5 - TSS region transcription start site region 134707
Cpgi7164 15 73644783 to 73646331 1548 CpG island CpG island 7164
Tssr134708 15 73645665 to 73645750 85 - TSS region transcription start site region 134708
1700010B13Rik 15 73645852 to 73652347 6495 + unclassified non-coding RNA gene RIKEN cDNA 1700010B13 gene
Tssr134709 15 73676443 to 73676461 18 - TSS region transcription start site region 134709
Tssr131536 15 73676661 to 73676675 14 + TSS region transcription start site region 131536
Tssr134710 15 73677338 to 73677355 17 - TSS region transcription start site region 134710
Gpr20 15 73694604 to 73707505 12901 - protein coding gene G protein-coupled receptor 20
Tssr134711 15 73707387 to 73707414 27 - TSS region transcription start site region 134711
Tssr131537 15 73723124 to 73723129 5 + TSS region transcription start site region 131537
Tssr131538 15 73723131 to 73723151 20 + TSS region transcription start site region 131538
Ptp4a3 15 73723145 to 73758766 35621 + protein coding gene protein tyrosine phosphatase 4a3
Tssr4623 15 73723156 to 73723159 3 + TSS region transcription start site region 4623
Tssr131539 15 73723164 to 73723174 10 + TSS region transcription start site region 131539
Cpgi7165 15 73724206 to 73725550 1344 CpG island CpG island 7165
Tssr131540 15 73724754 to 73724826 72 + TSS region transcription start site region 131540
Tssr131541 15 73727690 to 73727714 24 + TSS region transcription start site region 131541
Tssr131542 15 73729148 to 73729167 19 + TSS region transcription start site region 131542
Gm22106 15 73729164 to 73729290 126 + snRNA gene predicted gene, 22106
Tssr134712 15 73735071 to 73735127 56 - TSS region transcription start site region 134712
Tssr131543 15 73742856 to 73742859 3 + TSS region transcription start site region 131543
Cpgi7166 15 73747700 to 73748920 1220 CpG island CpG island 7166
Tssr131544 15 73748365 to 73748384 19 + TSS region transcription start site region 131544
Tssr131545 15 73748416 to 73748418 2 + TSS region transcription start site region 131545
Tssr131546 15 73749582 to 73749596 14 + TSS region transcription start site region 131546
Tssr131547 15 73750778 to 73750783 5 + TSS region transcription start site region 131547
Tssr131548 15 73751309 to 73751325 16 + TSS region transcription start site region 131548
Tssr131549 15 73751393 to 73751402 9 + TSS region transcription start site region 131549
Tssr4624 15 73751415 to 73751439 24 + TSS region transcription start site region 4624
Tssr134713 15 73751971 to 73752009 38 - TSS region transcription start site region 134713
Tssr134714 15 73761075 to 73761090 15 - TSS region transcription start site region 134714
Tssr131550 15 73761420 to 73761428 8 + TSS region transcription start site region 131550
Tssr134715 15 73765735 to 73765739 4 - TSS region transcription start site region 134715
Mroh5 15 73786936 to 73839671 52735 - protein coding gene maestro heat-like repeat family member 5
Ndufb4c 15 73809507 to 73809896 389 - pseudogene NADH:ubiquinone oxidoreductase subunit B4C
Tssr131551 15 73830073 to 73830095 22 + TSS region transcription start site region 131551
Tssr134716 15 73830978 to 73830988 10 - TSS region transcription start site region 134716
Tssr134717 15 73830995 to 73831003 8 - TSS region transcription start site region 134717
Tssr134718 15 73831008 to 73831024 16 - TSS region transcription start site region 134718
Gm6569 15 73834561 to 73839908 5347 + protein coding gene predicted gene 6569
Tssr131552 15 73836130 to 73836138 8 + TSS region transcription start site region 131552
Tssr131553 15 73836139 to 73836163 24 + TSS region transcription start site region 131553
Cpgi7167 15 73838839 to 73840485 1646 CpG island CpG island 7167
D15Mit237 15 73880362 to 73880480 118 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 237
Tssr131554 15 73920014 to 73920018 4 + TSS region transcription start site region 131554
Tssr131555 15 73957121 to 73957158 37 + TSS region transcription start site region 131555
Tssr134719 15 73986112 to 73986153 41 - TSS region transcription start site region 134719
D15Mit235 15 73986731 to 73986853 122 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 235
Gm32355 15 73990025 to 73994048 4023 + lncRNA gene predicted gene, 32355
Gm32405 15 73994102 to 74000010 5908 - lincRNA gene predicted gene, 32405
Tssr131556 15 74044160 to 74044162 2 + TSS region transcription start site region 131556
Gm7935 15 74080234 to 74081511 1277 - pseudogene predicted pseudogene 7935
Gm15387 15 74093686 to 74094333 647 - pseudogene predicted gene 15387
D15Mit1002 15 74180895 to 74181069 174 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 1002
D15Mit1001 15 74181102 to 74181208 106 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 1001
Gm32918 15 74195213 to 74204449 9236 - lncRNA gene predicted gene, 32918
D15Mit279 15 74219017 to 74219123 106 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-279
Gm19859 15 74234588 to 74399215 164627 - lncRNA gene predicted gene, 19859
Ses3 15 74245156 to 74245304 148 QTL salmonella enteritidis susceptibility 3
D15Mit29 15 74245156 to 74245304 148 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 29
Pfat4 15 74245156 to 74245304 148 QTL predicted fat percentage 4
7120482A17Rik 15 74268889 to 74270040 1151 unclassified gene RIKEN cDNA 7120482A17 gene
Gm41345 15 74280642 to 74285397 4755 - lncRNA gene predicted gene, 41345
Gm32839 15 74285568 to 74293815 8247 + lncRNA gene predicted gene, 32839