Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:72212688-72882707

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfnq3 15 40313626 to 72500731 32187105 QTL lung function QTL 3
Gm49457 15 72161346 to 72287314 125968 + lincRNA gene predicted gene, 49457
Gm23217 15 72255350 to 72255456 106 - snRNA gene predicted gene, 23217
Gm24390 15 72490958 to 72491019 61 - snRNA gene predicted gene, 24390
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
Cocia2 15 72500610 to 80014977 7514367 QTL cocaine induced activation 2
D15Mit105 15 72500610 to 72500731 121 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 105
Kcnk9 15 72501089 to 72546340 45251 - protein coding gene potassium channel, subfamily K, member 9
A930009L07Rik 15 72506988 to 72509257 2269 unclassified non-coding RNA gene RIKEN cDNA A930009L07 gene
Cpgi7151 15 72512126 to 72512586 460 CpG island CpG island 7151
D15Mit93 15 72539670 to 72539813 143 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 93
Cpgi7152 15 72545815 to 72548092 2277 CpG island CpG island 7152
Tssr134650 15 72547637 to 72547644 7 - TSS region transcription start site region 134650
Tssr134651 15 72547688 to 72547707 19 - TSS region transcription start site region 134651
Cpgi7153 15 72549399 to 72549645 246 CpG island CpG island 7153
Gm49460 15 72588283 to 72606053 17770 + antisense lncRNA gene predicted gene, 49460
Trappc9 15 72589620 to 73061204 471584 - protein coding gene trafficking protein particle complex 9
Cpgi7154 15 72668493 to 72668758 265 CpG island CpG island 7154
Gm28020 15 72721321 to 72721387 66 - snRNA gene predicted gene, 28020
Gm49459 15 72725404 to 72725860 456 + pseudogene predicted gene, 49459
3100002H20Rik 15 72785715 to 72787085 1370 unclassified gene RIKEN cDNA 3100002H20 gene
Peg13 15 72805604 to 72810324 4720 - sense intronic lncRNA gene paternally expressed 13
Tssr134652 15 72806225 to 72806245 20 - TSS region transcription start site region 134652
Tssr134653 15 72806425 to 72806446 21 - TSS region transcription start site region 134653
Tssr134654 15 72806714 to 72806726 12 - TSS region transcription start site region 134654
Cpgi7155 15 72809377 to 72810812 1435 CpG island CpG island 7155
Tssr134655 15 72809928 to 72809939 11 - TSS region transcription start site region 134655
Tssr134656 15 72809945 to 72809960 15 - TSS region transcription start site region 134656
Tssr134657 15 72809965 to 72810013 48 - TSS region transcription start site region 134657
Tssr134658 15 72810026 to 72810037 11 - TSS region transcription start site region 134658
Tssr134659 15 72810296 to 72810332 36 - TSS region transcription start site region 134659
Tssr4617 15 72814418 to 72814435 17 + TSS region transcription start site region 4617
D15Mit169 15 72816943 to 72817073 130 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 169
Tssr134660 15 72820012 to 72820018 6 - TSS region transcription start site region 134660
Gm41343 15 72845973 to 72848834 2861 + lncRNA gene predicted gene, 41343
Tssr4618 15 72848881 to 72848882 1 + TSS region transcription start site region 4618