Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:69679619-72520191

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sicd2 15 3444907 to 71325689 67880782 QTL seizure-induced cell death 2
Lfnq3 15 40313626 to 72500731 32187105 QTL lung function QTL 3
Gm23987 15 69685578 to 69685706 128 - snoRNA gene predicted gene, 23987
D15Mit186 15 69866467 to 69866585 118 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 186
D15Mit145 15 69875976 to 69876121 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 145
D15Nds1 15 69894127 to 69894220 93 DNA segment DNA segment, Chr 15, Nuffield Department of Surgery 1
D15Mit104 15 69936697 to 69936835 138 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 104
Gm19782 15 70011623 to 70077841 66218 + lincRNA gene predicted gene, 19782
Gm5216 15 70063061 to 70064669 1608 - pseudogene predicted gene 5216
D15Mit67 15 70201865 to 70202057 192 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 67
D15Dcr3 15 70257506 to 70257611 105 DNA segment DNA Segment, Chr 15, Derry C. Roopenian 3
Gm18282 15 70504854 to 70505438 584 - pseudogene predicted gene, 18282
Tssr4616 15 70514990 to 70514998 8 - TSS region transcription start site region 4616
Gm18155 15 70758053 to 70758592 539 + pseudogene predicted gene, 18155
Tssr134637 15 70791380 to 70791384 4 - TSS region transcription start site region 134637
D15Mit47 15 70808818 to 70808959 141 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 47
Gm49430 15 70961618 to 70962464 846 - pseudogene predicted gene, 49430
D15Dcr4 15 71057532 to 71057629 97 DNA segment DNA Segment, Chr 15, Derry C. Roopenian 4
Gm19199 15 71099619 to 71100191 572 - pseudogene predicted gene, 19199
D15Mit91 15 71157598 to 71157801 203 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 91
D15Mit92 15 71220054 to 71220200 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 92
Gm5217 15 71309834 to 71311311 1477 + pseudogene predicted gene 5217
D15Mit156 15 71325546 to 71325689 143 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 156
Fam135b 15 71438951 to 71728434 289483 - protein coding gene family with sequence similarity 135, member B
Tssr134638 15 71444063 to 71444067 4 - TSS region transcription start site region 134638
Tssr134639 15 71671421 to 71671441 20 - TSS region transcription start site region 134639
Cpgi7149 15 71727669 to 71728476 807 CpG island CpG island 7149
Tssr134640 15 71727733 to 71727744 11 - TSS region transcription start site region 134640
Tssr134641 15 71727815 to 71727848 33 - TSS region transcription start site region 134641
Tssr134642 15 71727885 to 71727909 24 - TSS region transcription start site region 134642
Tssr134643 15 71728224 to 71728244 20 - TSS region transcription start site region 134643
Tssr134644 15 71728282 to 71728293 11 - TSS region transcription start site region 134644
Gm47309 15 71794186 to 71794290 104 + miRNA gene predicted gene, 47309
Gm22519 15 71794188 to 71794365 177 + snoRNA gene predicted gene, 22519
Gm2999 15 71794570 to 71795107 537 + pseudogene predicted gene 2999
Col22a1 15 71795795 to 72034227 238432 - protein coding gene collagen, type XXII, alpha 1
Hwtf1 15 71800000 to 73000000 1200000 QTL heart weight by femur 1
Gm16308 15 71810108 to 71813780 3672 + antisense lncRNA gene predicted gene 16308
Cath5 15 71917280 to 71917280 0 QTL carotid atherosclerosis 5
Tssr134645 15 71954352 to 71954364 12 - TSS region transcription start site region 134645
Tssr134646 15 71954368 to 71954381 13 - TSS region transcription start site region 134646
Tssr134647 15 71954386 to 71954393 7 - TSS region transcription start site region 134647
Tssr134648 15 71954395 to 71954424 29 - TSS region transcription start site region 134648
Cpgi7150 15 72006738 to 72007054 316 CpG island CpG island 7150
Tssr134649 15 72034202 to 72034224 22 - TSS region transcription start site region 134649
D15Mit157 15 72101571 to 72101673 102 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 157
Gm49457 15 72161346 to 72287314 125968 + lincRNA gene predicted gene, 49457
Milac6 15 72211957 to 72211957 0 QTL methamphetamine induced locomotor activation 6
Gm23217 15 72255350 to 72255456 106 - snRNA gene predicted gene, 23217
Gm24390 15 72490958 to 72491019 61 - snRNA gene predicted gene, 24390
Cocia2 15 72500610 to 80014977 7514367 QTL cocaine induced activation 2
D15Mit105 15 72500610 to 72500731 121 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 105
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
Kcnk9 15 72501089 to 72546340 45251 - protein coding gene potassium channel, subfamily K, member 9
A930009L07Rik 15 72506988 to 72509257 2269 unclassified non-coding RNA gene RIKEN cDNA A930009L07 gene
Cpgi7151 15 72512126 to 72512586 460 CpG island CpG island 7151