Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:68323420-69706211

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm37320 15 68321381 to 68326333 4952 - unclassified gene predicted gene, 37320
Gm26621 15 68334715 to 68337430 2715 - unclassified non-coding RNA gene predicted gene, 26621
Mirc26 15 68337415 to 68341289 3874 complex/cluster/region microRNA cluster 26, including Mir30b through Mir30d
Mir30b 15 68337415 to 68337510 95 - miRNA gene microRNA 30b
Tssr134628 15 68337427 to 68337432 5 - TSS region transcription start site region 134628
Gm37296 15 68338295 to 68341216 2921 - unclassified gene predicted gene, 37296
Tssr134629 15 68340475 to 68340488 13 - TSS region transcription start site region 134629
Gm20732 15 68340983 to 68363176 22193 - lincRNA gene predicted gene 20732
Mir30d 15 68341208 to 68341289 81 - miRNA gene microRNA 30d
Tssr134630 15 68341210 to 68341215 5 - TSS region transcription start site region 134630
Tssr134631 15 68362090 to 68362104 14 - TSS region transcription start site region 134631
Cpgi7147 15 68362096 to 68363733 1637 CpG island CpG island 7147
Tssr134632 15 68363139 to 68363160 21 - TSS region transcription start site region 134632
Tssr134633 15 68363200 to 68363228 28 - TSS region transcription start site region 134633
Tssr134634 15 68393043 to 68393066 23 - TSS region transcription start site region 134634
Tssr131503 15 68395327 to 68395338 11 + TSS region transcription start site region 131503
Tssr134635 15 68401607 to 68401624 17 - TSS region transcription start site region 134635
D15Mit185 15 68402207 to 68402324 117 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 185
Tssr131504 15 68403753 to 68403755 2 + TSS region transcription start site region 131504
Heal27 15 68546512 to 68546662 150 QTL wound healing/regeneration 29
D15Mit66 15 68546512 to 68546662 150 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 66
Gm49414 15 68611410 to 68611707 297 - pseudogene predicted gene, 49414
Gm25987 15 68671416 to 68671522 106 + snRNA gene predicted gene, 25987
D15Mit212 15 68680304 to 68680390 86 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 212
Gm7859 15 68715009 to 68715763 754 - pseudogene predicted gene 7859
Gm49415 15 68755500 to 68760811 5311 + lincRNA gene predicted gene, 49415
Gm18930 15 68762491 to 68764253 1762 + pseudogene predicted gene, 18930
Pain2 15 68773490 to 68773777 287 QTL pain 2
D15Mit277 15 68773490 to 68773777 287 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-277
Szs13 15 68813983 to 68822600 8617 QTL seizure susceptibility 13
Gm7125 15 68876693 to 68877786 1093 + pseudogene predicted pseudogene 7125
Gm41341 15 68878315 to 68883576 5261 + lncRNA gene predicted gene, 41341
Cpgi7148 15 68927791 to 68929536 1745 CpG island CpG island 7148
Tssr131505 15 68928380 to 68928393 13 + TSS region transcription start site region 131505
Tssr131506 15 68928395 to 68928409 14 + TSS region transcription start site region 131506
Tssr131507 15 68928414 to 68928421 7 + TSS region transcription start site region 131507
Khdrbs3 15 68928420 to 69101211 172791 + protein coding gene KH domain containing, RNA binding, signal transduction associated 3
Tssr131508 15 68928423 to 68928452 29 + TSS region transcription start site region 131508
Tssr131509 15 68928462 to 68928483 21 + TSS region transcription start site region 131509
Tssr131510 15 68928703 to 68928729 26 + TSS region transcription start site region 131510
Tssr131511 15 68929359 to 68929376 17 + TSS region transcription start site region 131511
D15Mit3 15 68934666 to 68934802 136 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 3
Cocrb14 15 68934666 to 68934802 136 QTL cocaine related behavior 14
Gm49422 15 68959531 to 68994444 34913 + sense intronic lncRNA gene predicted gene, 49422
Gm31550 15 69022087 to 69024020 1933 + lncRNA gene predicted gene, 31550
Tssr131512 15 69041007 to 69041010 3 + TSS region transcription start site region 131512
D15Mit90 15 69138786 to 69138900 114 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 90
4930573C08Rik 15 69233931 to 69234999 1068 - unclassified non-coding RNA gene RIKEN cDNA 4930573C08 gene
Tssr134636 15 69234991 to 69234999 8 - TSS region transcription start site region 134636
4930504C09Rik 15 69270533 to 69274718 4185 + lincRNA gene RIKEN cDNA 4930504C09 gene
n-TMcat3 15 69396623 to 69396694 71 - tRNA gene nuclear encoded tRNA methionine 3 (anticodon CAT)
D15Dcr2 15 69412986 to 69413081 95 DNA segment DNA Segment, Chr 15, Derry C. Roopenian 2
Gm24232 15 69451015 to 69451146 131 - snoRNA gene predicted gene, 24232
D15Mit89 15 69490424 to 69490623 199 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 89
Gm23987 15 69685578 to 69685706 128 - snoRNA gene predicted gene, 23987