Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:68253043-68533066

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfat 15 68083764 to 68258856 175092 - protein coding gene zinc finger and AT hook domain containing
Cpgi7146 15 68258006 to 68259250 1244 CpG island CpG island 7146
Tssr131499 15 68258274 to 68258320 46 + TSS region transcription start site region 131499
Tssr131500 15 68258591 to 68258604 13 + TSS region transcription start site region 131500
Tssr134627 15 68258834 to 68258880 46 - TSS region transcription start site region 134627
Tssr131501 15 68259278 to 68259282 4 + TSS region transcription start site region 131501
D15Mit144 15 68288859 to 68288984 125 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 144
Hbtq 15 68288859 to 68288984 125 QTL habituation QTL
Tssr131502 15 68309776 to 68309784 8 + TSS region transcription start site region 131502
Gm10240 15 68309819 to 68310301 482 + pseudogene predicted gene 10240
Gm37320 15 68321381 to 68326333 4952 - unclassified gene predicted gene, 37320
Gm26621 15 68334715 to 68337430 2715 - unclassified non-coding RNA gene predicted gene, 26621
Mir30b 15 68337415 to 68337510 95 - miRNA gene microRNA 30b
Mirc26 15 68337415 to 68341289 3874 complex/cluster/region microRNA cluster 26, including Mir30b through Mir30d
Tssr134628 15 68337427 to 68337432 5 - TSS region transcription start site region 134628
Gm37296 15 68338295 to 68341216 2921 - unclassified gene predicted gene, 37296
Tssr134629 15 68340475 to 68340488 13 - TSS region transcription start site region 134629
Gm20732 15 68340983 to 68363176 22193 - lincRNA gene predicted gene 20732
Mir30d 15 68341208 to 68341289 81 - miRNA gene microRNA 30d
Tssr134630 15 68341210 to 68341215 5 - TSS region transcription start site region 134630
Tssr134631 15 68362090 to 68362104 14 - TSS region transcription start site region 134631
Cpgi7147 15 68362096 to 68363733 1637 CpG island CpG island 7147
Tssr134632 15 68363139 to 68363160 21 - TSS region transcription start site region 134632
Tssr134633 15 68363200 to 68363228 28 - TSS region transcription start site region 134633
Tssr134634 15 68393043 to 68393066 23 - TSS region transcription start site region 134634
Tssr131503 15 68395327 to 68395338 11 + TSS region transcription start site region 131503
Tssr134635 15 68401607 to 68401624 17 - TSS region transcription start site region 134635
D15Mit185 15 68402207 to 68402324 117 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 185
Tssr131504 15 68403753 to 68403755 2 + TSS region transcription start site region 131504