Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:66895063-67315085

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccn4 15 66891325 to 66923205 31880 + protein coding gene cellular communication network factor 4
Tssr131493 15 66909255 to 66909272 17 + TSS region transcription start site region 131493
Tssr131494 15 66909289 to 66909300 11 + TSS region transcription start site region 131494
Ndrg1 15 66929318 to 66969640 40322 - protein coding gene N-myc downstream regulated gene 1
Gm17035 15 66929607 to 66931107 1500 + antisense lncRNA gene predicted gene 17035
Tssr134595 15 66935115 to 66935123 8 - TSS region transcription start site region 134595
Tssr134596 15 66940216 to 66940229 13 - TSS region transcription start site region 134596
Tssr134597 15 66943113 to 66943136 23 - TSS region transcription start site region 134597
Tssr134598 15 66944025 to 66944063 38 - TSS region transcription start site region 134598
Tssr134599 15 66948419 to 66948427 8 - TSS region transcription start site region 134599
Tssr134600 15 66949050 to 66949068 18 - TSS region transcription start site region 134600
Tssr134601 15 66949228 to 66949234 6 - TSS region transcription start site region 134601
Cpgi7144 15 66968530 to 66970456 1926 CpG island CpG island 7144
Tssr134602 15 66969632 to 66969647 15 - TSS region transcription start site region 134602
Gm2895 15 66969780 to 67012703 42923 + bidirectional promoter lncRNA gene predicted gene 2895
Tssr134603 15 66969938 to 66969953 15 - TSS region transcription start site region 134603
Tssr134604 15 66978407 to 66978408 1 - TSS region transcription start site region 134604
Gm31286 15 67020386 to 67033257 12871 + lncRNA gene predicted gene, 31286
Gm31342 15 67040058 to 67040824 766 + lincRNA gene predicted gene, 31342
Tssr134605 15 67083065 to 67083072 7 - TSS region transcription start site region 134605
Tssr134606 15 67102023 to 67102041 18 - TSS region transcription start site region 134606
St3gal1 15 67102875 to 67176830 73955 - protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 1
Tssr134607 15 67104954 to 67104964 10 - TSS region transcription start site region 134607
Tssr134608 15 67105063 to 67105085 22 - TSS region transcription start site region 134608
Tssr134609 15 67105136 to 67105178 42 - TSS region transcription start site region 134609
Tssr4615 15 67107395 to 67107396 1 + TSS region transcription start site region 4615
Tssr134610 15 67113909 to 67113946 37 - TSS region transcription start site region 134610
Tssr134611 15 67114888 to 67114909 21 - TSS region transcription start site region 134611
Tssr134612 15 67115176 to 67115193 17 - TSS region transcription start site region 134612
Tssr134613 15 67128852 to 67128874 22 - TSS region transcription start site region 134613
Tssr134614 15 67128895 to 67128896 1 - TSS region transcription start site region 134614
Tssr134615 15 67128920 to 67128929 9 - TSS region transcription start site region 134615
Tssr134616 15 67128952 to 67128963 11 - TSS region transcription start site region 134616
Tssr134617 15 67128987 to 67129005 18 - TSS region transcription start site region 134617
Tssr134618 15 67129013 to 67129027 14 - TSS region transcription start site region 134618
Tssr134619 15 67131562 to 67131568 6 - TSS region transcription start site region 134619
Tssr134620 15 67146453 to 67146497 44 - TSS region transcription start site region 134620
Gm31400 15 67169705 to 67171881 2176 + lncRNA gene predicted gene, 31400
Cpgi7145 15 67174889 to 67177581 2692 CpG island CpG island 7145
Tssr134621 15 67176718 to 67176735 17 - TSS region transcription start site region 134621
Tssr134622 15 67176747 to 67176791 44 - TSS region transcription start site region 134622
Tssr134623 15 67176800 to 67176807 7 - TSS region transcription start site region 134623
Tssr134624 15 67176824 to 67176841 17 - TSS region transcription start site region 134624
Tssr131495 15 67176990 to 67177055 65 + TSS region transcription start site region 131495
1700012I11Rik 15 67226769 to 67377094 150325 + lincRNA gene RIKEN cDNA 1700012I11 gene
D15Mit123 15 67294616 to 67294756 140 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 123