Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:66577857-67007858

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7142 15 66577282 to 66578206 924 CpG island CpG island 7142
Phf20l1 15 66577519 to 66647043 69524 + protein coding gene PHD finger protein 20-like 1
Tssr131470 15 66579182 to 66579185 3 + TSS region transcription start site region 131470
Tssr131471 15 66604080 to 66604091 11 + TSS region transcription start site region 131471
Tssr131472 15 66615717 to 66615734 17 + TSS region transcription start site region 131472
Tssr131473 15 66615763 to 66615799 36 + TSS region transcription start site region 131473
Tssr131474 15 66642899 to 66642924 25 + TSS region transcription start site region 131474
D15Ertd509e 15 66646789 to 66647019 230 DNA segment DNA segment, Chr 15, ERATO Doi 509, expressed
Tssr131475 15 66670749 to 66670754 5 + TSS region transcription start site region 131475
Lcho4 15 66670754 to 66850721 179967 QTL liver cholesterol 4
Tg 15 66670754 to 66850721 179967 + protein coding gene thyroglobulin
Tssr131476 15 66700956 to 66700961 5 + TSS region transcription start site region 131476
Tssr134568 15 66702583 to 66702612 29 - TSS region transcription start site region 134568
Tssr134569 15 66702664 to 66702686 22 - TSS region transcription start site region 134569
Gm17140 15 66739059 to 66744327 5268 - antisense lncRNA gene predicted gene 17140
D15Mit211 15 66754868 to 66754992 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 211
Sla 15 66780819 to 66831829 51010 - protein coding gene src-like adaptor
Tssr4614 15 66782880 to 66782882 2 - TSS region transcription start site region 4614
Tssr134570 15 66783070 to 66783108 38 - TSS region transcription start site region 134570
Tssr134571 15 66792787 to 66792800 13 - TSS region transcription start site region 134571
Tssr134572 15 66792857 to 66792858 1 - TSS region transcription start site region 134572
Tssr131477 15 66798697 to 66798706 9 + TSS region transcription start site region 131477
Tssr131478 15 66798732 to 66798742 10 + TSS region transcription start site region 131478
Tssr131479 15 66798744 to 66798751 7 + TSS region transcription start site region 131479
Tssr134573 15 66801542 to 66801567 25 - TSS region transcription start site region 134573
Tssr134574 15 66801577 to 66801599 22 - TSS region transcription start site region 134574
Tssr134575 15 66801605 to 66801620 15 - TSS region transcription start site region 134575
Tssr134576 15 66801621 to 66801637 16 - TSS region transcription start site region 134576
Tssr131480 15 66801666 to 66801670 4 + TSS region transcription start site region 131480
Tssr134577 15 66801674 to 66801693 19 - TSS region transcription start site region 134577
Tssr134578 15 66803844 to 66803857 13 - TSS region transcription start site region 134578
Tssr131481 15 66803979 to 66804001 22 + TSS region transcription start site region 131481
Tssr134579 15 66804018 to 66804034 16 - TSS region transcription start site region 134579
Tssr134580 15 66804043 to 66804054 11 - TSS region transcription start site region 134580
Tssr134581 15 66804060 to 66804069 9 - TSS region transcription start site region 134581
Tssr134582 15 66804078 to 66804093 15 - TSS region transcription start site region 134582
Tssr131482 15 66804157 to 66804205 48 + TSS region transcription start site region 131482
Tssr131483 15 66807506 to 66807528 22 + TSS region transcription start site region 131483
Tssr134583 15 66810140 to 66810143 3 - TSS region transcription start site region 134583
Tssr134584 15 66810613 to 66810627 14 - TSS region transcription start site region 134584
Tssr134585 15 66812058 to 66812103 45 - TSS region transcription start site region 134585
Tssr134586 15 66812112 to 66812135 23 - TSS region transcription start site region 134586
Tssr134587 15 66812187 to 66812214 27 - TSS region transcription start site region 134587
Tssr131484 15 66812234 to 66812244 10 + TSS region transcription start site region 131484
Tssr131485 15 66812360 to 66812378 18 + TSS region transcription start site region 131485
Tssr134588 15 66812637 to 66812649 12 - TSS region transcription start site region 134588
Tssr134589 15 66812659 to 66812680 21 - TSS region transcription start site region 134589
Tssr134590 15 66812685 to 66812710 25 - TSS region transcription start site region 134590
Tssr134591 15 66812716 to 66812732 16 - TSS region transcription start site region 134591
Tssr134592 15 66813197 to 66813226 29 - TSS region transcription start site region 134592
Tssr134593 15 66831625 to 66831668 43 - TSS region transcription start site region 134593
D15Mit106 15 66843674 to 66843764 90 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 106
Tssr134594 15 66865197 to 66865207 10 - TSS region transcription start site region 134594
Tssr131486 15 66868800 to 66868805 5 + TSS region transcription start site region 131486
Gm46514 15 66876880 to 66891331 14451 - lncRNA gene predicted gene, 46514
Ccn4 15 66891325 to 66923205 31880 + protein coding gene cellular communication network factor 4
Tssr131487 15 66891363 to 66891375 12 + TSS region transcription start site region 131487
Tssr131488 15 66891378 to 66891389 11 + TSS region transcription start site region 131488
Cpgi7143 15 66891391 to 66891572 181 CpG island CpG island 7143
Tssr131489 15 66891414 to 66891430 16 + TSS region transcription start site region 131489
Tssr131490 15 66891457 to 66891468 11 + TSS region transcription start site region 131490
Tssr131491 15 66891477 to 66891495 18 + TSS region transcription start site region 131491
Tssr131492 15 66891539 to 66891546 7 + TSS region transcription start site region 131492
Tssr131493 15 66909255 to 66909272 17 + TSS region transcription start site region 131493
Tssr131494 15 66909289 to 66909300 11 + TSS region transcription start site region 131494
Ndrg1 15 66929318 to 66969640 40322 - protein coding gene N-myc downstream regulated gene 1
Gm17035 15 66929607 to 66931107 1500 + antisense lncRNA gene predicted gene 17035
Tssr134595 15 66935115 to 66935123 8 - TSS region transcription start site region 134595
Tssr134596 15 66940216 to 66940229 13 - TSS region transcription start site region 134596
Tssr134597 15 66943113 to 66943136 23 - TSS region transcription start site region 134597
Tssr134598 15 66944025 to 66944063 38 - TSS region transcription start site region 134598
Tssr134599 15 66948419 to 66948427 8 - TSS region transcription start site region 134599
Tssr134600 15 66949050 to 66949068 18 - TSS region transcription start site region 134600
Tssr134601 15 66949228 to 66949234 6 - TSS region transcription start site region 134601
Cpgi7144 15 66968530 to 66970456 1926 CpG island CpG island 7144
Tssr134602 15 66969632 to 66969647 15 - TSS region transcription start site region 134602
Gm2895 15 66969780 to 67012703 42923 + bidirectional promoter lncRNA gene predicted gene 2895
Tssr134603 15 66969938 to 66969953 15 - TSS region transcription start site region 134603
Tssr134604 15 66978407 to 66978408 1 - TSS region transcription start site region 134604