Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:6577073-12137077

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526 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fyb 15 6522853 to 6663313 140460 + protein coding gene FYN binding protein
Tssr130508 15 6578707 to 6578716 9 + TSS region transcription start site region 130508
Tssr130509 15 6579692 to 6579703 11 + TSS region transcription start site region 130509
Tssr130510 15 6579817 to 6579839 22 + TSS region transcription start site region 130510
Tssr130511 15 6579841 to 6579882 41 + TSS region transcription start site region 130511
Tssr130512 15 6579884 to 6579900 16 + TSS region transcription start site region 130512
Tssr130513 15 6579926 to 6579937 11 + TSS region transcription start site region 130513
Tssr130514 15 6579963 to 6579974 11 + TSS region transcription start site region 130514
Tssr130515 15 6579981 to 6579990 9 + TSS region transcription start site region 130515
Tssr130516 15 6580016 to 6580027 11 + TSS region transcription start site region 130516
Tssr130517 15 6580071 to 6580080 9 + TSS region transcription start site region 130517
Tssr130518 15 6580156 to 6580167 11 + TSS region transcription start site region 130518
Tssr130519 15 6580211 to 6580218 7 + TSS region transcription start site region 130519
Tssr130520 15 6580278 to 6580296 18 + TSS region transcription start site region 130520
Tssr130521 15 6580345 to 6580354 9 + TSS region transcription start site region 130521
Tssr130522 15 6580393 to 6580404 11 + TSS region transcription start site region 130522
Tssr130523 15 6580535 to 6580544 9 + TSS region transcription start site region 130523
Tssr130524 15 6580575 to 6580586 11 + TSS region transcription start site region 130524
Tssr130525 15 6580625 to 6580634 9 + TSS region transcription start site region 130525
Tssr130526 15 6580675 to 6580680 5 + TSS region transcription start site region 130526
Tssr130527 15 6580878 to 6580900 22 + TSS region transcription start site region 130527
Tssr130528 15 6580936 to 6580950 14 + TSS region transcription start site region 130528
Tssr130529 15 6580960 to 6580979 19 + TSS region transcription start site region 130529
Tssr130530 15 6580985 to 6580996 11 + TSS region transcription start site region 130530
Tssr130531 15 6581013 to 6581024 11 + TSS region transcription start site region 130531
Tssr130532 15 6581055 to 6581067 12 + TSS region transcription start site region 130532
Tssr133625 15 6581079 to 6581094 15 - TSS region transcription start site region 133625
Tssr133626 15 6592688 to 6592699 11 - TSS region transcription start site region 133626
Tssr130533 15 6592847 to 6592858 11 + TSS region transcription start site region 130533
Tssr130534 15 6592879 to 6592889 10 + TSS region transcription start site region 130534
Tssr130535 15 6597859 to 6597870 11 + TSS region transcription start site region 130535
Tssr130536 15 6599373 to 6599407 34 + TSS region transcription start site region 130536
Tssr130537 15 6599451 to 6599478 27 + TSS region transcription start site region 130537
Tssr130538 15 6599721 to 6599724 3 + TSS region transcription start site region 130538
Tssr133627 15 6600448 to 6600468 20 - TSS region transcription start site region 133627
Gm2245 15 6604341 to 6654303 49962 - antisense lncRNA gene predicted gene 2245
Tssr130539 15 6607812 to 6607813 1 + TSS region transcription start site region 130539
Tssr130540 15 6619596 to 6619631 35 + TSS region transcription start site region 130540
Tssr130541 15 6619678 to 6619708 30 + TSS region transcription start site region 130541
Tssr130542 15 6619709 to 6619726 17 + TSS region transcription start site region 130542
Tssr130543 15 6630055 to 6630075 20 + TSS region transcription start site region 130543
Tssr130544 15 6632862 to 6632883 21 + TSS region transcription start site region 130544
Tssr130545 15 6633671 to 6633685 14 + TSS region transcription start site region 130545
Tssr130546 15 6638981 to 6638995 14 + TSS region transcription start site region 130546
Tssr130547 15 6642574 to 6642588 14 + TSS region transcription start site region 130547
Tssr130548 15 6643687 to 6643706 19 + TSS region transcription start site region 130548
Tssr130549 15 6643715 to 6643733 18 + TSS region transcription start site region 130549
Tssr130550 15 6644754 to 6644792 38 + TSS region transcription start site region 130550
Tssr130551 15 6644796 to 6644820 24 + TSS region transcription start site region 130551
Tssr130552 15 6644821 to 6644833 12 + TSS region transcription start site region 130552
Tssr130553 15 6644889 to 6644933 44 + TSS region transcription start site region 130553
Tssr130554 15 6647639 to 6647651 12 + TSS region transcription start site region 130554
Tssr130555 15 6648090 to 6648104 14 + TSS region transcription start site region 130555
Gm7666 15 6653923 to 6654741 818 + pseudogene predicted pseudogene 7666
Tssr130556 15 6656537 to 6656563 26 + TSS region transcription start site region 130556
Tssr130557 15 6663349 to 6663364 15 + TSS region transcription start site region 130557
Tssr130558 15 6665059 to 6665073 14 + TSS region transcription start site region 130558
Tssr130559 15 6665296 to 6665318 22 + TSS region transcription start site region 130559
Tssr130560 15 6665854 to 6665866 12 + TSS region transcription start site region 130560
Tssr130561 15 6669515 to 6669556 41 + TSS region transcription start site region 130561
Cpgi6921 15 6707483 to 6709595 2112 CpG island CpG island 6921
Tssr130562 15 6708372 to 6708396 24 + TSS region transcription start site region 130562
Rictor 15 6708379 to 6800401 92022 + protein coding gene RPTOR independent companion of MTOR, complex 2
In(15Rictor;Slc1a3)1Ove 15 6708379 to 8710764 2002385 chromosomal inversion inversion, Chr 15, Paul A Overbeek 1
Tssr133628 15 6708879 to 6708886 7 - TSS region transcription start site region 133628
Tssr130563 15 6741954 to 6741959 5 + TSS region transcription start site region 130563
D15Ertd180e 15 6793304 to 6793552 248 DNA segment DNA segment, Chr 15, ERATO Doi 180, expressed
Tssr130564 15 6800075 to 6800080 5 + TSS region transcription start site region 130564
Osmr 15 6813577 to 6874969 61392 - protein coding gene oncostatin M receptor
Tssr133629 15 6831864 to 6831868 4 - TSS region transcription start site region 133629
Tssr133630 15 6837597 to 6837600 3 - TSS region transcription start site region 133630
Tssr133631 15 6853125 to 6853129 4 - TSS region transcription start site region 133631
Cpgi6922 15 6873925 to 6874744 819 CpG island CpG island 6922
Tssr133632 15 6874231 to 6874248 17 - TSS region transcription start site region 133632
Tssr133633 15 6874260 to 6874285 25 - TSS region transcription start site region 133633
Tssr133634 15 6874291 to 6874293 2 - TSS region transcription start site region 133634
Tssr133635 15 6874301 to 6874306 5 - TSS region transcription start site region 133635
Tssr133636 15 6874307 to 6874318 11 - TSS region transcription start site region 133636
Tssr133637 15 6874742 to 6874787 45 - TSS region transcription start site region 133637
Cpgi6923 15 6909135 to 6909308 173 CpG island CpG island 6923
Gm30559 15 6993261 to 7031161 37900 + lncRNA gene predicted gene, 30559
Gm38282 15 6996037 to 7002508 6471 + unclassified gene predicted gene, 38282
Gm30663 15 7034400 to 7041382 6982 + lncRNA gene predicted gene, 30663
Gm30971 15 7074356 to 7075632 1276 + lncRNA gene predicted gene, 30971
Tssr130565 15 7090608 to 7090615 7 + TSS region transcription start site region 130565
Lifr 15 7090615 to 7197489 106874 + protein coding gene LIF receptor alpha
Tssr133638 15 7115789 to 7115808 19 - TSS region transcription start site region 133638
Gm10050 15 7127224 to 7134218 6994 protein coding gene predicted gene 10050
Cpgi6924 15 7128766 to 7130301 1535 CpG island CpG island 6924
Tssr130566 15 7129557 to 7129573 16 + TSS region transcription start site region 130566
Tssr130567 15 7129597 to 7129608 11 + TSS region transcription start site region 130567
Tssr130568 15 7140528 to 7140535 7 + TSS region transcription start site region 130568
Tssr4544 15 7173847 to 7173849 2 + TSS region transcription start site region 4544
Tssr130569 15 7192894 to 7192922 28 + TSS region transcription start site region 130569
Tssr130570 15 7193515 to 7193518 3 + TSS region transcription start site region 130570
Tssr130571 15 7195067 to 7195071 4 + TSS region transcription start site region 130571
Tssr130572 15 7198704 to 7198707 3 + TSS region transcription start site region 130572
Egflam 15 7206120 to 7398395 192275 - protein coding gene EGF-like, fibronectin type III and laminin G domains
Tssr130573 15 7216338 to 7216339 1 + TSS region transcription start site region 130573
Tssr133639 15 7244966 to 7244987 21 - TSS region transcription start site region 133639
Gm16030 15 7341914 to 7342516 602 + pseudogene predicted gene 16030
8430418B16Rik 15 7376749 to 7378053 1304 unclassified gene RIKEN cDNA 8430418B16 gene
Cpgi6925 15 7397804 to 7398641 837 CpG island CpG island 6925
Gm16029 15 7397897 to 7411381 13484 + antisense lncRNA gene predicted gene 16029
Tssr133640 15 7398103 to 7398115 12 - TSS region transcription start site region 133640
Tssr133641 15 7398233 to 7398323 90 - TSS region transcription start site region 133641
Tssr133642 15 7398334 to 7398347 13 - TSS region transcription start site region 133642
Tssr133643 15 7398386 to 7398400 14 - TSS region transcription start site region 133643
Tssr133644 15 7398413 to 7398420 7 - TSS region transcription start site region 133644
Tssr133645 15 7398694 to 7398728 34 - TSS region transcription start site region 133645
Tssr4545 15 7406591 to 7406592 1 + TSS region transcription start site region 4545
Gm41263 15 7442301 to 7446851 4550 + lncRNA gene predicted gene, 41263
Tssr130574 15 7442396 to 7442406 10 + TSS region transcription start site region 130574
Tssr130575 15 7442478 to 7442489 11 + TSS region transcription start site region 130575
Tssr130576 15 7442496 to 7442524 28 + TSS region transcription start site region 130576
Gm41262 15 7443412 to 7468281 24869 - lncRNA gene predicted gene, 41262
2810405K22Rik 15 7489887 to 7490817 930 unclassified gene RIKEN cDNA 2810405K22 gene
Tssr130577 15 7497375 to 7497379 4 + TSS region transcription start site region 130577
Tssr130578 15 7497493 to 7497500 7 + TSS region transcription start site region 130578
Gm41264 15 7500373 to 7562384 62011 - lncRNA gene predicted gene, 41264
Gm49206 15 7575993 to 7576242 249 - pseudogene predicted gene, 49206
Gm37743 15 7669965 to 7670340 375 - unclassified gene predicted gene, 37743
Gm49207 15 7760714 to 7760992 278 + lincRNA gene predicted gene, 49207
Gm19227 15 7778948 to 7779481 533 + pseudogene predicted gene, 19227
Cpgi6926 15 7809916 to 7811505 1589 CpG island CpG island 6926
Tssr130579 15 7810041 to 7810056 15 + TSS region transcription start site region 130579
Gdnf 15 7810846 to 7837575 26729 + protein coding gene glial cell line derived neurotrophic factor
Cpgi6927 15 7812091 to 7812295 204 CpG island CpG island 6927
Cpgi6928 15 7812858 to 7814119 1261 CpG island CpG island 6928
Cpgi6929 15 7815142 to 7815958 816 CpG island CpG island 6929
D15Mit80 15 7865616 to 7865765 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 80
Wdr70 15 7873055 to 8099209 226154 - protein coding gene WD repeat domain 70
Tssr133646 15 7885199 to 7885242 43 - TSS region transcription start site region 133646
Gm7686 15 7889183 to 7894528 5345 + pseudogene predicted gene 7686
Tssr133647 15 7923593 to 7923595 2 - TSS region transcription start site region 133647
Tssr130580 15 7975034 to 7975048 14 + TSS region transcription start site region 130580
Rpl19-ps6 15 7975075 to 7975660 585 + pseudogene ribosomal protein L19, pseudogene 6
Gm27529 15 7975328 to 7975407 79 + miRNA gene predicted gene, 27529
Cpgi6930 15 8098790 to 8099429 639 CpG island CpG island 6930
Tssr133648 15 8099182 to 8099215 33 - TSS region transcription start site region 133648
Tssr130581 15 8103017 to 8103018 1 + TSS region transcription start site region 130581
Cpgi6931 15 8108967 to 8109696 729 CpG island CpG island 6931
Nup155 15 8109256 to 8159859 50603 + protein coding gene nucleoporin 155
Tssr130582 15 8109296 to 8109307 11 + TSS region transcription start site region 130582
Tssr130583 15 8109322 to 8109356 34 + TSS region transcription start site region 130583
Tssr130584 15 8109367 to 8109374 7 + TSS region transcription start site region 130584
Tssr130585 15 8109377 to 8109386 9 + TSS region transcription start site region 130585
Tssr130586 15 8112662 to 8112665 3 + TSS region transcription start site region 130586
Tssr130587 15 8113668 to 8113679 11 + TSS region transcription start site region 130587
Cpgi6932 15 8168739 to 8169459 720 CpG island CpG island 6932
Tssr130588 15 8169031 to 8169066 35 + TSS region transcription start site region 130588
Tssr130589 15 8169067 to 8169105 38 + TSS region transcription start site region 130589
Cplane1 15 8169106 to 8271158 102052 + protein coding gene ciliogenesis and planar polarity effector 1
Gm46494 15 8171978 to 8173524 1546 + pseudogene predicted gene, 46494
Gm24144 15 8220004 to 8220114 110 + snRNA gene predicted gene, 24144
Gm41265 15 8221454 to 8223111 1657 - lncRNA gene predicted gene, 41265
Tssr130590 15 8225260 to 8225268 8 + TSS region transcription start site region 130590
Nipbl 15 8290617 to 8444463 153846 - protein coding gene NIPBL cohesin loading factor
Tssr133649 15 8347471 to 8347476 5 - TSS region transcription start site region 133649
Tssr133650 15 8350315 to 8350336 21 - TSS region transcription start site region 133650
Tssr133651 15 8350421 to 8350440 19 - TSS region transcription start site region 133651
Tssr133652 15 8350473 to 8350488 15 - TSS region transcription start site region 133652
Tssr133653 15 8350876 to 8350890 14 - TSS region transcription start site region 133653
Tssr133654 15 8351402 to 8351415 13 - TSS region transcription start site region 133654
Tssr133655 15 8351533 to 8351551 18 - TSS region transcription start site region 133655
Tssr133656 15 8351635 to 8351668 33 - TSS region transcription start site region 133656
Tssr133657 15 8351696 to 8351712 16 - TSS region transcription start site region 133657
Tssr133658 15 8359256 to 8359273 17 - TSS region transcription start site region 133658
Tssr133659 15 8361751 to 8361768 17 - TSS region transcription start site region 133659
Tssr133660 15 8387078 to 8387081 3 - TSS region transcription start site region 133660
Tssr133661 15 8398018 to 8398021 3 - TSS region transcription start site region 133661
Tssr133662 15 8430748 to 8430761 13 - TSS region transcription start site region 133662
AW557046 15 8435112 to 8445863 10751 + protein coding gene expressed sequence AW557046
Tssr133663 15 8436656 to 8436660 4 - TSS region transcription start site region 133663
Cpgi6933 15 8443486 to 8445654 2168 CpG island CpG island 6933
Tssr130591 15 8443605 to 8443636 31 + TSS region transcription start site region 130591
Tssr133664 15 8444164 to 8444209 45 - TSS region transcription start site region 133664
Tssr133665 15 8444218 to 8444246 28 - TSS region transcription start site region 133665
Tssr133666 15 8444435 to 8444448 13 - TSS region transcription start site region 133666
Tssr133667 15 8444449 to 8444506 57 - TSS region transcription start site region 133667
Tssr133668 15 8444609 to 8444668 59 - TSS region transcription start site region 133668
Tssr130592 15 8444733 to 8444749 16 + TSS region transcription start site region 130592
Tssr4546 15 8444865 to 8444877 12 - TSS region transcription start site region 4546
Tssr130593 15 8444965 to 8444973 8 + TSS region transcription start site region 130593
Tssr130594 15 8445410 to 8445420 10 + TSS region transcription start site region 130594
Tssr130595 15 8445565 to 8445570 5 + TSS region transcription start site region 130595
Cpgi6934 15 8445981 to 8446220 239 CpG island CpG island 6934
Tssr130596 15 8446188 to 8446194 6 + TSS region transcription start site region 130596
Tssr133669 15 8465276 to 8465305 29 - TSS region transcription start site region 133669
Tssr133670 15 8465308 to 8465321 13 - TSS region transcription start site region 133670
Gm49247 15 8480871 to 8481945 1074 - lincRNA gene predicted gene, 49247
Gm31282 15 8482119 to 8500343 18224 + lincRNA gene predicted gene, 31282
D15Mit247 15 8501490 to 8501637 147 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-247
Tssr130597 15 8512112 to 8512140 28 + TSS region transcription start site region 130597
Gm49249 15 8512327 to 8532794 20467 + lincRNA gene predicted gene, 49249
Gm2310 15 8518683 to 8519953 1270 - protein coding gene predicted gene 2310
Gm2348 15 8529135 to 8529434 299 - pseudogene predicted pseudogene 2348
Gm49250 15 8529435 to 8529591 156 - pseudogene predicted gene, 49250
Cpgi6935 15 8568782 to 8569743 961 CpG island CpG island 6935
Tssr130598 15 8569964 to 8569979 15 + TSS region transcription start site region 130598