Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:64087337-66057459

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae2b 15 51141298 to 65072459 13931161 QTL experimental allergic encephalomyelitis susceptibility 2b
Asap1 15 64086857 to 64382919 296062 - protein coding gene ArfGAP with SH3 domain, ankyrin repeat and PH domain1
Tssr134522 15 64095339 to 64095341 2 - TSS region transcription start site region 134522
Tssr131454 15 64098316 to 64098351 35 + TSS region transcription start site region 131454
Gm20717 15 64098317 to 64101397 3080 + antisense lncRNA gene predicted gene 20717
Tssr134523 15 64110988 to 64111003 15 - TSS region transcription start site region 134523
Tssr134524 15 64133247 to 64133264 17 - TSS region transcription start site region 134524
Tssr134525 15 64135803 to 64135806 3 - TSS region transcription start site region 134525
Tssr134526 15 64156259 to 64156264 5 - TSS region transcription start site region 134526
Tssr131455 15 64173270 to 64173278 8 + TSS region transcription start site region 131455
Tssr134527 15 64182423 to 64182428 5 - TSS region transcription start site region 134527
Tssr131456 15 64220503 to 64220508 5 + TSS region transcription start site region 131456
Tssr134528 15 64242690 to 64242698 8 - TSS region transcription start site region 134528
Tssr134529 15 64285288 to 64285296 8 - TSS region transcription start site region 134529
Tssr134530 15 64303182 to 64303187 5 - TSS region transcription start site region 134530
Tssr134531 15 64304952 to 64304970 18 - TSS region transcription start site region 134531
Tssr134532 15 64304996 to 64305018 22 - TSS region transcription start site region 134532
Cpgi7137 15 64311779 to 64313251 1472 CpG island CpG island 7137
Tssr134533 15 64312492 to 64312508 16 - TSS region transcription start site region 134533
Tssr134534 15 64312513 to 64312539 26 - TSS region transcription start site region 134534
Tssr134535 15 64312546 to 64312584 38 - TSS region transcription start site region 134535
Tssr134536 15 64312604 to 64312630 26 - TSS region transcription start site region 134536
Tssr134537 15 64312636 to 64312692 56 - TSS region transcription start site region 134537
Tssr134538 15 64312793 to 64312814 21 - TSS region transcription start site region 134538
1700010G06Rik 15 64314497 to 64316076 1579 + antisense lncRNA gene RIKEN cDNA 1700010G06 gene
Gm10926 15 64328028 to 64329017 989 - unclassified non-coding RNA gene predicted gene 10926
Cpgi7138 15 64382151 to 64383262 1111 CpG island CpG island 7138
Tssr134539 15 64382736 to 64382845 109 - TSS region transcription start site region 134539
Tssr134540 15 64382908 to 64382936 28 - TSS region transcription start site region 134540
Tssr134541 15 64382937 to 64382958 21 - TSS region transcription start site region 134541
Tssr134542 15 64383023 to 64383035 12 - TSS region transcription start site region 134542
Tssr134543 15 64383039 to 64383069 30 - TSS region transcription start site region 134543
Tssr134544 15 64383076 to 64383087 11 - TSS region transcription start site region 134544
Gm30563 15 64396379 to 64433598 37219 + lincRNA gene predicted gene, 30563
Hfib1 15 64434485 to 64434630 145 QTL hepatic fibrogenesis 1
D15Mit122 15 64434485 to 64434630 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 122
Gm46509 15 64503053 to 64503554 501 - lncRNA gene predicted gene, 46509
Gm30632 15 64534004 to 64572818 38814 + lncRNA gene predicted gene, 30632
Gct3 15 64537747 to 64537842 95 QTL granulosa cell tumorigenesis 3
D15Mit133 15 64537747 to 64537842 95 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 133
Tssr134545 15 64571164 to 64571168 4 - TSS region transcription start site region 134545
Tssr131457 15 64613791 to 64613806 15 + TSS region transcription start site region 131457
Gm30691 15 64627441 to 64630705 3264 - lincRNA gene predicted gene, 30691
Adcy8 15 64699035 to 64922296 223261 - protein coding gene adenylate cyclase 8
Gm30752 15 64798244 to 64813532 15288 + lncRNA gene predicted gene, 30752
Gm21798 15 64817694 to 64937996 120302 + protein coding gene predicted gene, 21798
Cpgi7139 15 64920270 to 64922676 2406 CpG island CpG island 7139
Tssr134546 15 64920984 to 64920995 11 - TSS region transcription start site region 134546
Tssr134547 15 64921385 to 64921403 18 - TSS region transcription start site region 134547
Tssr4612 15 64921457 to 64921485 28 - TSS region transcription start site region 4612
Tssr134548 15 64921610 to 64921688 78 - TSS region transcription start site region 134548
Tssr134549 15 64922290 to 64922315 25 - TSS region transcription start site region 134549
Tssr134550 15 64922325 to 64922341 16 - TSS region transcription start site region 134550
Tssr134551 15 64923135 to 64923162 27 - TSS region transcription start site region 134551
Gm21961 15 64979544 to 65014904 35360 - protein coding gene predicted gene, 21961
D15Mit65 15 64979823 to 64979972 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 65
Gm5046 15 65015154 to 65015764 610 + pseudogene predicted gene 5046
Gm49241 15 65041574 to 65042067 493 + pseudogene predicted gene, 49241
D15Mit234 15 65072337 to 65072459 122 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 234
Gm7814 15 65195339 to 65195778 439 + pseudogene predicted gene 7814
Gm49242 15 65200234 to 65200562 328 - pseudogene predicted gene, 49242
D15Mit63 15 65245184 to 65245328 144 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 63
D15Mit64 15 65522964 to 65523070 106 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 64
D15Mit102 15 65565716 to 65565915 199 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 102
D15Mit62 15 65593513 to 65593647 134 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 62
Pcir3 15 65593513 to 65593647 134 QTL periosteal circumference 3
Gm49243 15 65687828 to 65688148 320 - pseudogene predicted gene, 49243
Gm23907 15 65694549 to 65694737 188 + snRNA gene predicted gene, 23907
Gm41339 15 65778741 to 65786963 8222 - lncRNA gene predicted gene, 41339
Cpgi7140 15 65786681 to 65787783 1102 CpG island CpG island 7140
Tssr134552 15 65786982 to 65786993 11 - TSS region transcription start site region 134552
Tssr131458 15 65787023 to 65787090 67 + TSS region transcription start site region 131458
Efr3a 15 65787034 to 65873816 86782 + protein coding gene EFR3 homolog A
Tssr131459 15 65787100 to 65787117 17 + TSS region transcription start site region 131459
Gm41338 15 65787253 to 65793156 5903 + lncRNA gene predicted gene, 41338
Tssr131460 15 65805005 to 65805012 7 + TSS region transcription start site region 131460
Tssr131461 15 65810179 to 65810186 7 + TSS region transcription start site region 131461
Tssr131462 15 65810217 to 65810228 11 + TSS region transcription start site region 131462
Gm20405 15 65857869 to 65858356 487 + unclassified non-coding RNA gene predicted gene 20405
Tssr131463 15 65865663 to 65865698 35 + TSS region transcription start site region 131463
Oc90 15 65876053 to 65912397 36344 - protein coding gene otoconin 90
Tssr134553 15 65912285 to 65912292 7 - TSS region transcription start site region 134553
Tssr134554 15 65912347 to 65912357 10 - TSS region transcription start site region 134554
Tssr134555 15 65912419 to 65912437 18 - TSS region transcription start site region 134555
Hhla1 15 65922443 to 65976804 54361 - protein coding gene HERV-H LTR-associating 1
Tssr131464 15 65926814 to 65926821 7 + TSS region transcription start site region 131464
Gm2991 15 65928454 to 65928933 479 - pseudogene predicted pseudogene 2991
Tssr4613 15 65947346 to 65947347 1 + TSS region transcription start site region 4613
Tssr134556 15 65976800 to 65976805 5 - TSS region transcription start site region 134556
Kcnq3 15 65986390 to 66286636 300246 - protein coding gene potassium voltage-gated channel, subfamily Q, member 3
Tssr134557 15 65993084 to 65993092 8 - TSS region transcription start site region 134557
Bhr2 15 103517472 to 64434485 -39082987 QTL bronchial hyperresponsiveness 2