Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:64008182-64598187

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam49b 15 63929094 to 64060452 131358 - protein coding gene family with sequence similarity 49, member B
Tssr134512 15 64012829 to 64012836 7 - TSS region transcription start site region 134512
Tssr134513 15 64015524 to 64015540 16 - TSS region transcription start site region 134513
Tssr134514 15 64022989 to 64022993 4 - TSS region transcription start site region 134514
Tssr131452 15 64024087 to 64024094 7 + TSS region transcription start site region 131452
Gm25628 15 64025948 to 64026052 104 + snRNA gene predicted gene, 25628
A230048O21Rik 15 64027262 to 64030952 3690 unclassified gene RIKEN cDNA A230048O21 gene
Tssr131453 15 64055373 to 64055386 13 + TSS region transcription start site region 131453
Tssr134515 15 64058998 to 64059001 3 - TSS region transcription start site region 134515
Cpgi7136 15 64059555 to 64060956 1401 CpG island CpG island 7136
Tssr134516 15 64059782 to 64059786 4 - TSS region transcription start site region 134516
Tssr134517 15 64060218 to 64060278 60 - TSS region transcription start site region 134517
Tssr134518 15 64060309 to 64060318 9 - TSS region transcription start site region 134518
Tssr134519 15 64060327 to 64060435 108 - TSS region transcription start site region 134519
Tssr134520 15 64060439 to 64060478 39 - TSS region transcription start site region 134520
Tssr134521 15 64060676 to 64060690 14 - TSS region transcription start site region 134521
Asap1 15 64086857 to 64382919 296062 - protein coding gene ArfGAP with SH3 domain, ankyrin repeat and PH domain1
Tssr134522 15 64095339 to 64095341 2 - TSS region transcription start site region 134522
Tssr131454 15 64098316 to 64098351 35 + TSS region transcription start site region 131454
Gm20717 15 64098317 to 64101397 3080 + antisense lncRNA gene predicted gene 20717
Tssr134523 15 64110988 to 64111003 15 - TSS region transcription start site region 134523
Tssr134524 15 64133247 to 64133264 17 - TSS region transcription start site region 134524
Tssr134525 15 64135803 to 64135806 3 - TSS region transcription start site region 134525
Tssr134526 15 64156259 to 64156264 5 - TSS region transcription start site region 134526
Tssr131455 15 64173270 to 64173278 8 + TSS region transcription start site region 131455
Tssr134527 15 64182423 to 64182428 5 - TSS region transcription start site region 134527
Tssr131456 15 64220503 to 64220508 5 + TSS region transcription start site region 131456
Tssr134528 15 64242690 to 64242698 8 - TSS region transcription start site region 134528
Tssr134529 15 64285288 to 64285296 8 - TSS region transcription start site region 134529
Tssr134530 15 64303182 to 64303187 5 - TSS region transcription start site region 134530
Tssr134531 15 64304952 to 64304970 18 - TSS region transcription start site region 134531
Tssr134532 15 64304996 to 64305018 22 - TSS region transcription start site region 134532
Cpgi7137 15 64311779 to 64313251 1472 CpG island CpG island 7137
Tssr134533 15 64312492 to 64312508 16 - TSS region transcription start site region 134533
Tssr134534 15 64312513 to 64312539 26 - TSS region transcription start site region 134534
Tssr134535 15 64312546 to 64312584 38 - TSS region transcription start site region 134535
Tssr134536 15 64312604 to 64312630 26 - TSS region transcription start site region 134536
Tssr134537 15 64312636 to 64312692 56 - TSS region transcription start site region 134537
Tssr134538 15 64312793 to 64312814 21 - TSS region transcription start site region 134538
1700010G06Rik 15 64314497 to 64316076 1579 + antisense lncRNA gene RIKEN cDNA 1700010G06 gene
Gm10926 15 64328028 to 64329017 989 - unclassified non-coding RNA gene predicted gene 10926
Cpgi7138 15 64382151 to 64383262 1111 CpG island CpG island 7138
Tssr134539 15 64382736 to 64382845 109 - TSS region transcription start site region 134539
Tssr134540 15 64382908 to 64382936 28 - TSS region transcription start site region 134540
Tssr134541 15 64382937 to 64382958 21 - TSS region transcription start site region 134541
Tssr134542 15 64383023 to 64383035 12 - TSS region transcription start site region 134542
Tssr134543 15 64383039 to 64383069 30 - TSS region transcription start site region 134543
Tssr134544 15 64383076 to 64383087 11 - TSS region transcription start site region 134544
Gm30563 15 64396379 to 64433598 37219 + lincRNA gene predicted gene, 30563
D15Mit122 15 64434485 to 64434630 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 122
Hfib1 15 64434485 to 64434630 145 QTL hepatic fibrogenesis 1
Gm46509 15 64503053 to 64503554 501 - lncRNA gene predicted gene, 46509
Gm30632 15 64534004 to 64572818 38814 + lncRNA gene predicted gene, 30632
D15Mit133 15 64537747 to 64537842 95 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 133
Gct3 15 64537747 to 64537842 95 QTL granulosa cell tumorigenesis 3
Tssr134545 15 64571164 to 64571168 4 - TSS region transcription start site region 134545
Bhr2 15 103517472 to 64434485 -39082987 QTL bronchial hyperresponsiveness 2