Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:63505971-64078739

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D15Mit270 15 63517797 to 63517996 199 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 270
Alaa4 15 63517797 to 63517996 199 QTL alopecia areata 4
Amzn3 15 63517797 to 63517996 199 QTL anatomical modifier of Zfp423 3
Msq1 15 63517797 to 81202235 17684438 QTL MAV-1 susceptibility QTL 1
Tssr4608 15 63530300 to 63530302 2 + TSS region transcription start site region 4608
Cpgi7134 15 63572957 to 63573277 320 CpG island CpG island 7134
Tssr134497 15 63611212 to 63611224 12 - TSS region transcription start site region 134497
Tssr131450 15 63611447 to 63611471 24 + TSS region transcription start site region 131450
Gm5473 15 63631697 to 63632338 641 + pseudogene predicted pseudogene 5473
Tssr134498 15 63647890 to 63647904 14 - TSS region transcription start site region 134498
Tssr134499 15 63649119 to 63649129 10 - TSS region transcription start site region 134499
Tssr134500 15 63718246 to 63718292 46 - TSS region transcription start site region 134500
4930449C09Rik 15 63718318 to 63737296 18978 + lincRNA gene RIKEN cDNA 4930449C09 gene
Tssr131451 15 63718341 to 63718373 32 + TSS region transcription start site region 131451
Gm41336 15 63740669 to 63745351 4682 + lincRNA gene predicted gene, 41336
Gm49019 15 63751659 to 63755435 3776 + lincRNA gene predicted gene, 49019
Gm46499 15 63760161 to 63760580 419 + pseudogene predicted gene, 46499
Gsdmc 15 63775971 to 63808739 32768 - protein coding gene gasdermin C
Tssr134501 15 63808733 to 63808745 12 - TSS region transcription start site region 134501
Tssr134502 15 63808747 to 63808752 5 - TSS region transcription start site region 134502
Tssr4609 15 63814339 to 63814360 21 - TSS region transcription start site region 4609
1700065I16Rik 15 63817188 to 63819540 2352 + pseudogene RIKEN cDNA 1700065I16 gene
Gsdmc2 15 63824346 to 63845177 20831 - protein coding gene gasdermin C2
Gsdmcl1 15 63847309 to 63850942 3633 + pseudogene gasdermin C-like 1
Gsdmc3 15 63857724 to 63878558 20834 - protein coding gene gasdermin C3
Tssr4610 15 63878548 to 63878549 1 - TSS region transcription start site region 4610
Gsdmcl2 15 63880707 to 63889073 8366 + pseudogene gasdermin C-like 2
Gsdmc4 15 63891264 to 63912297 21033 - protein coding gene gasdermin C4
Tssr134503 15 63912287 to 63912297 10 - TSS region transcription start site region 134503
Gsdmcl-ps 15 63914461 to 63925453 10992 + pseudogene gasdermin C-like, pseudogene
Fam49b 15 63929094 to 64060452 131358 - protein coding gene family with sequence similarity 49, member B
Tssr134504 15 63943261 to 63943308 47 - TSS region transcription start site region 134504
Tssr134505 15 63963665 to 63963679 14 - TSS region transcription start site region 134505
Tssr134506 15 63975451 to 63975455 4 - TSS region transcription start site region 134506
Tssr134507 15 63985528 to 63985532 4 - TSS region transcription start site region 134507
Tssr134508 15 63990618 to 63990621 3 - TSS region transcription start site region 134508
Cpgi7135 15 63997434 to 63998804 1370 CpG island CpG island 7135
Tssr134509 15 63998043 to 63998054 11 - TSS region transcription start site region 134509
Tssr134510 15 63998071 to 63998101 30 - TSS region transcription start site region 134510
Tssr4611 15 63998135 to 63998138 3 - TSS region transcription start site region 4611
Tssr134511 15 63998174 to 63998185 11 - TSS region transcription start site region 134511
Tssr134512 15 64012829 to 64012836 7 - TSS region transcription start site region 134512
Tssr134513 15 64015524 to 64015540 16 - TSS region transcription start site region 134513
Tssr134514 15 64022989 to 64022993 4 - TSS region transcription start site region 134514
Tssr131452 15 64024087 to 64024094 7 + TSS region transcription start site region 131452
Gm25628 15 64025948 to 64026052 104 + snRNA gene predicted gene, 25628
A230048O21Rik 15 64027262 to 64030952 3690 unclassified gene RIKEN cDNA A230048O21 gene
Tssr131453 15 64055373 to 64055386 13 + TSS region transcription start site region 131453
Tssr134515 15 64058998 to 64059001 3 - TSS region transcription start site region 134515
Cpgi7136 15 64059555 to 64060956 1401 CpG island CpG island 7136
Tssr134516 15 64059782 to 64059786 4 - TSS region transcription start site region 134516
Tssr134517 15 64060218 to 64060278 60 - TSS region transcription start site region 134517
Tssr134518 15 64060309 to 64060318 9 - TSS region transcription start site region 134518
Tssr134519 15 64060327 to 64060435 108 - TSS region transcription start site region 134519
Tssr134520 15 64060439 to 64060478 39 - TSS region transcription start site region 134520
Tssr134521 15 64060676 to 64060690 14 - TSS region transcription start site region 134521