Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:62209216-63702872

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pvt1 15 62037986 to 62260215 222229 + lincRNA gene Pvt1 oncogene
H2afy3 15 62218221 to 62219332 1111 - pseudogene H2A histone family, member Y3
Tssr134489 15 62219446 to 62219452 6 - TSS region transcription start site region 134489
Tssr131438 15 62220510 to 62220517 7 + TSS region transcription start site region 131438
Tssr131439 15 62246524 to 62246528 4 + TSS region transcription start site region 131439
Tssr131440 15 62250553 to 62250556 3 + TSS region transcription start site region 131440
2900056L01Rik 15 62259291 to 62260214 923 unclassified gene RIKEN cDNA 2900056L01 gene
Tssr131441 15 62264414 to 62264418 4 + TSS region transcription start site region 131441
Tssr131442 15 62328715 to 62328721 6 + TSS region transcription start site region 131442
Tssr4607 15 62339522 to 62339524 2 - TSS region transcription start site region 4607
Tssr134490 15 62547960 to 62547968 8 - TSS region transcription start site region 134490
Gm24810 15 62652935 to 62653004 69 - miRNA gene predicted gene, 24810
Gm41333 15 62669184 to 62679142 9958 + lincRNA gene predicted gene, 41333
Tssr131443 15 62730821 to 62730841 20 + TSS region transcription start site region 131443
Tssr131444 15 62741060 to 62741070 10 + TSS region transcription start site region 131444
Gm22521 15 62793201 to 62793334 133 + snoRNA gene predicted gene, 22521
Tssr134491 15 62809289 to 62809298 9 - TSS region transcription start site region 134491
D15Mit208 15 62826050 to 62826194 144 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 208
Tssr131445 15 62886369 to 62886375 6 + TSS region transcription start site region 131445
Tssr131446 15 62893880 to 62893890 10 + TSS region transcription start site region 131446
Gm30113 15 62954216 to 62957872 3656 + lncRNA gene predicted gene, 30113
Tsg101-ps 15 62980648 to 62981817 1169 + pseudogene tumor susceptibility gene 101, pseudogene
Tssr131447 15 62981153 to 62981179 26 + TSS region transcription start site region 131447
Gm41334 15 63067500 to 63070764 3264 - lncRNA gene predicted gene, 41334
Gm30159 15 63110465 to 63145446 34981 - lincRNA gene predicted gene, 30159
Gm49013 15 63146233 to 63146716 483 + pseudogene predicted gene, 49013
Gm49014 15 63255904 to 63278780 22876 + lincRNA gene predicted gene, 49014
Tssr131448 15 63255938 to 63255953 15 + TSS region transcription start site region 131448
Tssr134492 15 63270456 to 63270461 5 - TSS region transcription start site region 134492
Gm41335 15 63353241 to 63357026 3785 - lincRNA gene predicted gene, 41335
Gm20740 15 63414397 to 63479608 65211 - lncRNA gene predicted gene, 20740
Tssr134493 15 63470893 to 63470897 4 - TSS region transcription start site region 134493
Tssr131449 15 63476200 to 63476204 4 + TSS region transcription start site region 131449
Tssr134494 15 63479543 to 63479554 11 - TSS region transcription start site region 134494
Tssr134495 15 63479622 to 63479646 24 - TSS region transcription start site region 134495
Tssr134496 15 63479661 to 63479670 9 - TSS region transcription start site region 134496
Gm25702 15 63481214 to 63481276 62 - snRNA gene predicted gene, 25702
Gm4942 15 63490962 to 63492293 1331 - pseudogene predicted gene 4942
D15Mit270 15 63517797 to 63517996 199 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 270
Amzn3 15 63517797 to 63517996 199 QTL anatomical modifier of Zfp423 3
Alaa4 15 63517797 to 63517996 199 QTL alopecia areata 4
Msq1 15 63517797 to 81202235 17684438 QTL MAV-1 susceptibility QTL 1
Tssr4608 15 63530300 to 63530302 2 + TSS region transcription start site region 4608
Cpgi7134 15 63572957 to 63573277 320 CpG island CpG island 7134
Tssr134497 15 63611212 to 63611224 12 - TSS region transcription start site region 134497
Tssr131450 15 63611447 to 63611471 24 + TSS region transcription start site region 131450
Gm5473 15 63631697 to 63632338 641 + pseudogene predicted pseudogene 5473
Tssr134498 15 63647890 to 63647904 14 - TSS region transcription start site region 134498
Tssr134499 15 63649119 to 63649129 10 - TSS region transcription start site region 134499