Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:60769635-62009636

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lratd2 15 60818996 to 60825599 6603 - protein coding gene LRAT domain containing 1
Tssr134471 15 60819716 to 60819720 4 - TSS region transcription start site region 134471
Tssr134472 15 60819840 to 60819857 17 - TSS region transcription start site region 134472
Tssr134473 15 60820137 to 60820179 42 - TSS region transcription start site region 134473
Tssr134474 15 60822205 to 60822232 27 - TSS region transcription start site region 134474
Cpgi7129 15 60822703 to 60825132 2429 CpG island CpG island 7129
Tssr131400 15 60822947 to 60822970 23 + TSS region transcription start site region 131400
9930014A18Rik 15 60822965 to 60831400 8435 + lncRNA gene RIKEN cDNA 9930014A18 gene
Tssr131401 15 60822979 to 60822990 11 + TSS region transcription start site region 131401
Tssr131402 15 60823943 to 60823956 13 + TSS region transcription start site region 131402
Tssr134475 15 60824857 to 60824872 15 - TSS region transcription start site region 134475
Tssr134476 15 60824884 to 60824895 11 - TSS region transcription start site region 134476
Tssr134477 15 60824903 to 60824917 14 - TSS region transcription start site region 134477
Tssr134478 15 60824919 to 60824924 5 - TSS region transcription start site region 134478
Tssr134479 15 60824942 to 60824966 24 - TSS region transcription start site region 134479
D15Mit46 15 60826658 to 60826805 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 46
Tssr134480 15 60836317 to 60836319 2 - TSS region transcription start site region 134480
A1bg 15 60917589 to 60921270 3681 - protein coding gene alpha-1-B glycoprotein
Tssr134481 15 60921280 to 60921288 8 - TSS region transcription start site region 134481
Gm48951 15 60938347 to 60938636 289 - pseudogene predicted gene, 48951
4930402D18Rik 15 60953304 to 60967339 14035 + antisense lncRNA gene RIKEN cDNA 4930402D18 gene
Tssr131403 15 61157829 to 61157848 19 + TSS region transcription start site region 131403
Gm38563 15 61157869 to 61165735 7866 + lincRNA gene predicted gene, 38563
Gm49497 15 61184151 to 61241065 56914 + lincRNA gene predicted gene, 49497
Gm29904 15 61288441 to 61331370 42929 + lincRNA gene predicted gene, 29904
D15Mit88 15 61353425 to 61353634 209 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 88
Gm24696 15 61357871 to 61358004 133 - snoRNA gene predicted gene, 24696
Tssr131404 15 61389635 to 61389636 1 + TSS region transcription start site region 131404
Tssr134482 15 61441657 to 61441686 29 - TSS region transcription start site region 134482
Gm49498 15 61534676 to 61544183 9507 - lincRNA gene predicted gene, 49498
Tssr134483 15 61546439 to 61546450 11 - TSS region transcription start site region 134483
D15Ertd489e 15 61557801 to 61558037 236 DNA segment DNA segment, Chr 15, ERATO Doi 489, expressed
D15Mit207 15 61648168 to 61648276 108 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 207
D15Mit209 15 61681464 to 61681588 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 209
Vtbt17 15 61681464 to 61681588 124 QTL vertebral trabecular bone trait 17
D030024E09Rik 15 61699284 to 61774451 75167 - lincRNA gene RIKEN cDNA D030024E09 gene
Gm18154 15 61826247 to 61826835 588 + pseudogene predicted gene, 18154
D15Mit168 15 61921442 to 61921590 148 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 168
D15Mit27 15 61934830 to 61935034 204 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 27
Gm18788 15 61962870 to 61963483 613 + pseudogene predicted gene, 18788
Gm37947 15 61979241 to 61983302 4061 - unclassified gene predicted gene, 37947
Cpgi7130 15 61984876 to 61988361 3485 CpG island CpG island 7130
Tssr134484 15 61985157 to 61985174 17 - TSS region transcription start site region 134484
Tssr131405 15 61985377 to 61985397 20 + TSS region transcription start site region 131405
Myc 15 61985391 to 61990374 4983 + protein coding gene myelocytomatosis oncogene
Tssr131406 15 61985540 to 61985556 16 + TSS region transcription start site region 131406
Tssr131407 15 61987038 to 61987059 21 + TSS region transcription start site region 131407
D15Kyo1 15 61987280 to 61987432 152 DNA segment DNA segment, Chr 15, Kyoto University 1
D15Mit17 15 61987292 to 61987432 140 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 17
Tria2 15 61987292 to 61987432 140 QTL T cell receptor induced activation 2
Tssr131408 15 61987304 to 61987318 14 + TSS region transcription start site region 131408
Tssr131409 15 61987359 to 61987388 29 + TSS region transcription start site region 131409
Tssr131410 15 61987410 to 61987491 81 + TSS region transcription start site region 131410
Tssr131411 15 61987492 to 61987521 29 + TSS region transcription start site region 131411
Tssr131412 15 61987608 to 61987623 15 + TSS region transcription start site region 131412
Tssr131413 15 61987679 to 61987753 74 + TSS region transcription start site region 131413
Tssr131414 15 61987791 to 61987800 9 + TSS region transcription start site region 131414
Tssr131415 15 61988018 to 61988116 98 + TSS region transcription start site region 131415
Tssr131416 15 61988164 to 61988173 9 + TSS region transcription start site region 131416
Tssr131417 15 61988226 to 61988237 11 + TSS region transcription start site region 131417
Tssr131418 15 61988244 to 61988251 7 + TSS region transcription start site region 131418
Tssr131419 15 61988957 to 61988961 4 + TSS region transcription start site region 131419
Tssr131420 15 61989392 to 61989405 13 + TSS region transcription start site region 131420
Tssr131421 15 61989417 to 61989435 18 + TSS region transcription start site region 131421
Cpgi7131 15 61989432 to 61989731 299 CpG island CpG island 7131
Tssr131422 15 61989441 to 61989454 13 + TSS region transcription start site region 131422
Tssr131423 15 61989482 to 61989494 12 + TSS region transcription start site region 131423
Tssr134485 15 61989543 to 61989558 15 - TSS region transcription start site region 134485
Tssr131424 15 61989556 to 61989567 11 + TSS region transcription start site region 131424
Tssr131425 15 61990034 to 61990058 24 + TSS region transcription start site region 131425
Tssr131426 15 61990104 to 61990109 5 + TSS region transcription start site region 131426