Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:60522589-61316270

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D15Mit210 15 60587743 to 60587866 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 210
Gm48946 15 60670343 to 60672084 1741 + lincRNA gene predicted gene, 48946
D15Mit196 15 60679818 to 60679947 129 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 196
Gm23835 15 60703992 to 60704123 131 - snoRNA gene predicted gene, 23835
Tssr4606 15 60742826 to 60742828 2 + TSS region transcription start site region 4606
Gm7086 15 60742856 to 60746524 3668 + pseudogene predicted pseudogene 7086
Tssr134470 15 60744915 to 60744918 3 - TSS region transcription start site region 134470
Cpgi7128 15 60745102 to 60745257 155 CpG island CpG island 7128
Gm48947 15 60760231 to 60760744 513 + pseudogene predicted gene, 48947
Lratd2 15 60818996 to 60825599 6603 - protein coding gene LRAT domain containing 1
Tssr134471 15 60819716 to 60819720 4 - TSS region transcription start site region 134471
Tssr134472 15 60819840 to 60819857 17 - TSS region transcription start site region 134472
Tssr134473 15 60820137 to 60820179 42 - TSS region transcription start site region 134473
Tssr134474 15 60822205 to 60822232 27 - TSS region transcription start site region 134474
Cpgi7129 15 60822703 to 60825132 2429 CpG island CpG island 7129
Tssr131400 15 60822947 to 60822970 23 + TSS region transcription start site region 131400
9930014A18Rik 15 60822965 to 60831400 8435 + lncRNA gene RIKEN cDNA 9930014A18 gene
Tssr131401 15 60822979 to 60822990 11 + TSS region transcription start site region 131401
Tssr131402 15 60823943 to 60823956 13 + TSS region transcription start site region 131402
Tssr134475 15 60824857 to 60824872 15 - TSS region transcription start site region 134475
Tssr134476 15 60824884 to 60824895 11 - TSS region transcription start site region 134476
Tssr134477 15 60824903 to 60824917 14 - TSS region transcription start site region 134477
Tssr134478 15 60824919 to 60824924 5 - TSS region transcription start site region 134478
Tssr134479 15 60824942 to 60824966 24 - TSS region transcription start site region 134479
D15Mit46 15 60826658 to 60826805 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 46
Tssr134480 15 60836317 to 60836319 2 - TSS region transcription start site region 134480
A1bg 15 60917589 to 60921270 3681 - protein coding gene alpha-1-B glycoprotein
Tssr134481 15 60921280 to 60921288 8 - TSS region transcription start site region 134481
Gm48951 15 60938347 to 60938636 289 - pseudogene predicted gene, 48951
4930402D18Rik 15 60953304 to 60967339 14035 + antisense lncRNA gene RIKEN cDNA 4930402D18 gene
Tssr131403 15 61157829 to 61157848 19 + TSS region transcription start site region 131403
Gm38563 15 61157869 to 61165735 7866 + lincRNA gene predicted gene, 38563
Gm49497 15 61184151 to 61241065 56914 + lincRNA gene predicted gene, 49497
Gm29904 15 61288441 to 61331370 42929 + lincRNA gene predicted gene, 29904